BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024017
         (505 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001754940.1| predicted protein [Physcomitrella patens] gi...   120   2e-25
ref|XP_002987747.1| hypothetical protein SELMODRAFT_447091 [Sela...   120   2e-25
ref|XP_002987509.1| hypothetical protein SELMODRAFT_447018 [Sela...   119   4e-25
ref|XP_004971221.1| PREDICTED: crossover junction endonuclease M...   117   1e-24
gb|EMT23400.1| Crossover junction endonuclease mus81 [Aegilops t...   117   1e-24
ref|XP_006843412.1| hypothetical protein AMTR_s00053p00134470 [A...   117   2e-24
ref|XP_003567101.1| PREDICTED: crossover junction endonuclease M...   114   1e-23
ref|XP_006412649.1| hypothetical protein EUTSA_v10024629mg [Eutr...   112   5e-23
gb|EMT28004.1| Crossover junction endonuclease MUS81 [Aegilops t...   112   5e-23
gb|EEE55999.1| hypothetical protein OsJ_04752 [Oryza sativa Japo...   112   5e-23
ref|NP_001045390.1| Os01g0948100 [Oryza sativa Japonica Group] g...   112   5e-23
ref|XP_006646673.1| PREDICTED: crossover junction endonuclease M...   111   9e-23
gb|EEC72153.1| hypothetical protein OsI_05185 [Oryza sativa Indi...   111   1e-22
gb|EMT07690.1| Crossover junction endonuclease MUS81 [Aegilops t...   109   3e-22
ref|XP_006285810.1| hypothetical protein CARUB_v10007286mg [Caps...   109   4e-22
ref|XP_002867325.1| ATMUS81 [Arabidopsis lyrata subsp. lyrata] g...   109   4e-22
gb|EMS65434.1| Crossover junction endonuclease MUS81 [Triticum u...   108   6e-22
ref|NP_194816.2| crossover junction endonuclease MUS81 [Arabidop...   108   6e-22
ref|XP_002513110.1| endonuclease, putative [Ricinus communis] gi...   108   6e-22
gb|ABL98212.1| endonuclease [Arabidopsis thaliana]                    108   6e-22

>ref|XP_001754940.1| predicted protein [Physcomitrella patens]
           gi|162694044|gb|EDQ80394.1| predicted protein
           [Physcomitrella patens]
          Length = 651

 Score =  120 bits (301), Expect = 2e-25
 Identities = 59/94 (62%), Positives = 70/94 (74%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           CM Y  FV  C+D+  E V+DVFGVQLMQV  VTED+AL++L+ YPT+ SLA AY  LEG
Sbjct: 556 CMRYVEFVNFCKDVEMERVTDVFGVQLMQVRNVTEDMALSILERYPTLHSLALAYTELEG 615

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIW 319
           D   QE LLKDIPIRNK+KTI +  SK IY L+W
Sbjct: 616 DVQAQEQLLKDIPIRNKNKTISANISKNIYKLVW 649


>ref|XP_002987747.1| hypothetical protein SELMODRAFT_447091 [Selaginella moellendorffii]
            gi|300144639|gb|EFJ11322.1| hypothetical protein
            SELMODRAFT_447091 [Selaginella moellendorffii]
          Length = 1239

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/98 (58%), Positives = 73/98 (74%)
 Frame = +2

Query: 26   KSKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYA 205
            +SK CM+Y  F+E C D+ KE V DVFGVQLMQ+  VTEDIAL++LD YPTVL+LA+AY 
Sbjct: 1140 ESKRCMSYQEFLEHCSDVEKERVRDVFGVQLMQIRHVTEDIALSILDRYPTVLALAQAYT 1199

Query: 206  SLEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIW 319
            +LEGD   Q+NLL  + I NK+K+I S  S+ +YN  W
Sbjct: 1200 ALEGDVSKQKNLLTGLGILNKNKSISSVVSRNVYNFFW 1237


>ref|XP_002987509.1| hypothetical protein SELMODRAFT_447018 [Selaginella moellendorffii]
            gi|300144663|gb|EFJ11345.1| hypothetical protein
            SELMODRAFT_447018 [Selaginella moellendorffii]
          Length = 1259

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/98 (57%), Positives = 73/98 (74%)
 Frame = +2

Query: 26   KSKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYA 205
            +SK CM+Y  F+E C D+ KE V+DVFGVQLMQ+  VTEDIAL++LD YPTVL+LA+AY 
Sbjct: 1160 ESKRCMSYQEFLEHCSDVEKERVTDVFGVQLMQIRHVTEDIALSILDRYPTVLALAQAYT 1219

Query: 206  SLEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIW 319
            +LEGD   Q+NLL  + I NK+K+I    S+ +YN  W
Sbjct: 1220 ALEGDVSKQKNLLTGLGILNKNKSISGVVSRNVYNFFW 1257


>ref|XP_004971221.1| PREDICTED: crossover junction endonuclease MUS81-like [Setaria
           italica]
          Length = 452

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/97 (58%), Positives = 72/97 (74%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C TYD F  KCRDL K+TVS +F +QLMQVPQVTE +ALAV++ YPT+ SLA+AY+ LEG
Sbjct: 356 CPTYDEFEGKCRDLQKKTVSQIFALQLMQVPQVTEKVALAVVEFYPTLFSLARAYSMLEG 415

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           D   QE +LK     NKSK I + AS+ ++ L+WGDG
Sbjct: 416 DTRAQEEMLK-----NKSKVINAGASRNVFKLVWGDG 447


>gb|EMT23400.1| Crossover junction endonuclease mus81 [Aegilops tauschii]
          Length = 517

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/100 (59%), Positives = 74/100 (74%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD FV++C DL K TVSD+F +QLMQVPQVTE+ ALAV   YPT+LSLAKAYA 
Sbjct: 423 SRLCLTYDEFVKRCSDLEKVTVSDIFALQLMQVPQVTEEAALAVTSLYPTLLSLAKAYAM 482

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD+  QE +LK     NKS  + + ASK I+ LIW +G
Sbjct: 483 LDGDRRAQEEMLK-----NKSDMVNAGASKNIFKLIWAEG 517


>ref|XP_006843412.1| hypothetical protein AMTR_s00053p00134470 [Amborella trichopoda]
           gi|548845779|gb|ERN05087.1| hypothetical protein
           AMTR_s00053p00134470 [Amborella trichopoda]
          Length = 170

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/94 (60%), Positives = 74/94 (78%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C +Y+ F++ C+DL K TVSDVF +QLMQVPQVTE++ALAVLD YPTVLSLA+AY+ +EG
Sbjct: 80  CPSYEEFIKTCQDLEKMTVSDVFALQLMQVPQVTEEVALAVLDMYPTVLSLARAYSEIEG 139

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIW 319
           D   QE++L     RN+SK IG+ AS+ IY L+W
Sbjct: 140 DVRAQEDML-----RNQSKAIGAGASRNIYKLVW 168


>ref|XP_003567101.1| PREDICTED: crossover junction endonuclease MUS81-like [Brachypodium
           distachyon]
          Length = 570

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/100 (56%), Positives = 71/100 (71%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD FV KC D  K TVSD+F VQLMQVPQVTE  ALA+ + YPT+LSLA+AY+ 
Sbjct: 476 SRACLTYDEFVNKCYDFKKITVSDIFAVQLMQVPQVTEQTALAITELYPTLLSLAQAYSM 535

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD   QE +LK      KSK +   AS+ I+ L+WG+G
Sbjct: 536 LDGDTRAQEEMLK-----KKSKMVNGGASRNIFKLVWGEG 570


>ref|XP_006412649.1| hypothetical protein EUTSA_v10024629mg [Eutrema salsugineum]
           gi|557113819|gb|ESQ54102.1| hypothetical protein
           EUTSA_v10024629mg [Eutrema salsugineum]
          Length = 660

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/110 (52%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
 Frame = +2

Query: 5   SLNRNQYKSKPCMTY---DGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYP 175
           SL  N  +SK  ++Y   D FV++C+DL K T+SDVF +QLMQVPQVTE+IA+AVLD YP
Sbjct: 555 SLVNNDDQSKVSVSYPCFDSFVKRCQDLDKMTISDVFAIQLMQVPQVTEEIAMAVLDMYP 614

Query: 176 TVLSLAKAYASLEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGD 325
           T+ SLA AYA+LEG+ L QE +L++      +  I +TASK ++ L+WG+
Sbjct: 615 TLSSLASAYANLEGNMLAQEEMLRN----RSNNVICATASKNVFKLVWGE 660


>gb|EMT28004.1| Crossover junction endonuclease MUS81 [Aegilops tauschii]
          Length = 500

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/100 (56%), Positives = 72/100 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD FV++C DL K T+SD+F +QLMQVPQVTE+ ALAV   YPT+LSLAKAY  
Sbjct: 406 SRLCVTYDEFVKRCSDLEKVTMSDIFALQLMQVPQVTEEAALAVTSLYPTLLSLAKAYTM 465

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD+  QE +LK      KS  + + ASK I+ LIW +G
Sbjct: 466 LDGDRRAQEEMLK-----KKSDMVNTGASKNIFKLIWAEG 500


>gb|EEE55999.1| hypothetical protein OsJ_04752 [Oryza sativa Japonica Group]
          Length = 641

 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD F +KC DL K TVSDVF +QLMQVPQVTE+ ALAV+  YPT+ SLAKAY+ 
Sbjct: 547 SQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVPQVTEEAALAVIGLYPTLFSLAKAYSM 606

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD   QE +LK     NKS  I + AS+ I+ L+W +G
Sbjct: 607 LDGDTHAQEKMLK-----NKSTLINAGASRNIFKLVWAEG 641


>ref|NP_001045390.1| Os01g0948100 [Oryza sativa Japonica Group]
           gi|75150377|sp|Q8GT06.1|MUS81_ORYSJ RecName:
           Full=Crossover junction endonuclease MUS81; AltName:
           Full=Protein MMS AND UV SENSITIVE 81; Short=OsMUS81
           gi|22830922|dbj|BAC15787.1| endonuclease-like [Oryza
           sativa Japonica Group] gi|113534921|dbj|BAF07304.1|
           Os01g0948100 [Oryza sativa Japonica Group]
          Length = 660

 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD F +KC DL K TVSDVF +QLMQVPQVTE+ ALAV+  YPT+ SLAKAY+ 
Sbjct: 566 SQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVPQVTEEAALAVIGLYPTLFSLAKAYSM 625

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD   QE +LK     NKS  I + AS+ I+ L+W +G
Sbjct: 626 LDGDTHAQEKMLK-----NKSTLINAGASRNIFKLVWAEG 660


>ref|XP_006646673.1| PREDICTED: crossover junction endonuclease MUS81-like [Oryza
           brachyantha]
          Length = 648

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/100 (56%), Positives = 72/100 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C TYD F +KC DL K TVSD+F +QLMQVPQVTE+ ALAV+  YPT+ +LA+AY+ 
Sbjct: 554 SRVCPTYDEFKKKCDDLKKVTVSDLFALQLMQVPQVTEEAALAVIGFYPTIFTLAQAYSM 613

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD   QE +LK     NKS  I + AS+ I+ LIWG+G
Sbjct: 614 LDGDTRAQEEMLK-----NKSTLINAGASRNIFKLIWGEG 648


>gb|EEC72153.1| hypothetical protein OsI_05185 [Oryza sativa Indica Group]
          Length = 507

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/100 (57%), Positives = 71/100 (71%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C TYD F +KC DL K TVSDVF +QLMQVPQVTE+ ALAV+  YPT+ SLAKAY+ 
Sbjct: 413 SQVCPTYDEFTKKCDDLKKITVSDVFALQLMQVPQVTEEAALAVIGLYPTLFSLAKAYSM 472

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+GD   QE +LK     NKS  I + AS+ I+ L+W +G
Sbjct: 473 LDGDTHAQEKMLK-----NKSTLINARASRNIFKLVWAEG 507


>gb|EMT07690.1| Crossover junction endonuclease MUS81 [Aegilops tauschii]
          Length = 233

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD FV++C DL K T+SD+F +QLMQVPQVT++ ALA+   YPT+LSLAKAY  
Sbjct: 139 SRLCLTYDEFVKRCSDLEKVTMSDIFALQLMQVPQVTDEAALAITSLYPTLLSLAKAYTM 198

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGDG 328
           L+ D+  QE +LK     NKS  + + ASK I+ LIW +G
Sbjct: 199 LDRDRPAQEEMLK-----NKSGMVNTGASKNIFKLIWAEG 233


>ref|XP_006285810.1| hypothetical protein CARUB_v10007286mg [Capsella rubella]
           gi|482554515|gb|EOA18708.1| hypothetical protein
           CARUB_v10007286mg [Capsella rubella]
          Length = 573

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/95 (53%), Positives = 72/95 (75%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C ++D FV++C+DL K T+SDVFG+QLMQ+PQVTE+IA+AVLD YPT+LSL  AY+ L+G
Sbjct: 482 CPSFDDFVKRCQDLDKMTISDVFGIQLMQIPQVTEEIAIAVLDTYPTLLSLVSAYSKLDG 541

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWG 322
           +   QE +L++      +  I ++ASK IY L+WG
Sbjct: 542 NVSAQEEMLRN----QSNNVICASASKNIYKLVWG 572


>ref|XP_002867325.1| ATMUS81 [Arabidopsis lyrata subsp. lyrata]
           gi|297313161|gb|EFH43584.1| ATMUS81 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 659

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/96 (53%), Positives = 73/96 (76%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C ++D FV++C+DL K T+SDVF +QLMQ+PQVTE+IA+AVLD YPT+LSLA AY+ LEG
Sbjct: 568 CPSFDSFVKRCQDLDKMTISDVFAIQLMQIPQVTEEIAIAVLDSYPTLLSLASAYSHLEG 627

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGD 325
           +   QE +L++      +  I ++ASK I+ L+WG+
Sbjct: 628 NVSAQEEMLRN----RSNNVICASASKNIFKLVWGE 659


>gb|EMS65434.1| Crossover junction endonuclease MUS81 [Triticum urartu]
          Length = 523

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/97 (56%), Positives = 70/97 (72%)
 Frame = +2

Query: 29  SKPCMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYAS 208
           S+ C+TYD FV++  DL K TVSD+F +QLMQVPQVTE+ ALAV   YPT+LSLA+AY  
Sbjct: 430 SRLCLTYDEFVKRSSDLEKVTVSDIFALQLMQVPQVTEEAALAVTSLYPTILSLARAYKM 489

Query: 209 LEGDKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIW 319
           L+GD+  QE +LK     NKS  + + ASK I+ LIW
Sbjct: 490 LDGDRRAQEEMLK-----NKSNMVNAGASKNIFKLIW 521


>ref|NP_194816.2| crossover junction endonuclease MUS81 [Arabidopsis thaliana]
           gi|75252152|sp|Q5W9E7.1|MUS81_ARATH RecName:
           Full=Crossover junction endonuclease MUS81; AltName:
           Full=Protein MMS AND UV SENSITIVE 81; Short=AtMUS81
           gi|54606637|dbj|BAD66696.1| endonuclease [Arabidopsis
           thaliana] gi|332660422|gb|AEE85822.1| crossover junction
           endonuclease MUS81 [Arabidopsis thaliana]
          Length = 659

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/96 (54%), Positives = 72/96 (75%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C ++D FV++C+DL K T+SDVF +QLMQVPQVTE+IA+AVLD YPT+LSLA AY+ LE 
Sbjct: 568 CPSFDSFVKRCQDLDKMTISDVFAIQLMQVPQVTEEIAIAVLDMYPTLLSLASAYSHLEA 627

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGD 325
           D   QE +L++      +  I ++ASK I+ L+WG+
Sbjct: 628 DVSAQEEMLRN----RSNNVICASASKNIFKLVWGE 659


>ref|XP_002513110.1| endonuclease, putative [Ricinus communis]
           gi|223548121|gb|EEF49613.1| endonuclease, putative
           [Ricinus communis]
          Length = 669

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/96 (52%), Positives = 74/96 (77%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C ++D F+++C+DL K T+SDVF +QLMQVPQVTE+IA+AVLD YPT++SLA AY+ L+G
Sbjct: 576 CPSFDEFIKRCQDLEKMTISDVFAIQLMQVPQVTEEIAIAVLDLYPTLISLACAYSLLDG 635

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGD 325
           D   QE +L+    ++ +  I +TAS+ I+ L+WG+
Sbjct: 636 DVCAQEEMLR----KHSNNAISATASRNIFRLVWGN 667


>gb|ABL98212.1| endonuclease [Arabidopsis thaliana]
          Length = 660

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/96 (54%), Positives = 72/96 (75%)
 Frame = +2

Query: 38  CMTYDGFVEKCRDLAKETVSDVFGVQLMQVPQVTEDIALAVLDHYPTVLSLAKAYASLEG 217
           C ++D FV++C+DL K T+SDVF +QLMQVPQVTE+IA+AVLD YPT+LSLA AY+ LE 
Sbjct: 569 CPSFDSFVKRCQDLDKMTISDVFAIQLMQVPQVTEEIAIAVLDMYPTLLSLASAYSHLEA 628

Query: 218 DKLGQENLLKDIPIRNKSKTIGSTASKRIYNLIWGD 325
           D   QE +L++      +  I ++ASK I+ L+WG+
Sbjct: 629 DVSAQEEMLRN----RSNNVICASASKNIFKLVWGE 660