BLASTX nr result
ID: Ephedra27_contig00023945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023945
(455 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18382.1| unknown [Picea sitchensis] 94 2e-17
ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [A... 91 2e-16
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 84 2e-14
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 84 2e-14
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 84 3e-14
ref|XP_003555184.1| PREDICTED: RNA pseudouridine synthase 1-like... 84 3e-14
ref|XP_002318955.1| predicted protein [Populus trichocarpa] 83 3e-14
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 81 1e-13
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [... 81 1e-13
gb|ESW16990.1| hypothetical protein PHAVU_007G200900g [Phaseolus... 81 2e-13
gb|EMS63083.1| RNA pseudourine synthase 1 [Triticum urartu] 80 2e-13
tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m... 80 2e-13
tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m... 80 2e-13
gb|ACN27400.1| unknown [Zea mays] 80 2e-13
gb|ACN26382.1| unknown [Zea mays] 80 2e-13
ref|NP_001140548.1| hypothetical protein [Zea mays] gi|194699944... 80 2e-13
gb|AAG50905.1|AC069159_6 RNA pseudouridylate synthase, putative ... 80 3e-13
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana] 80 3e-13
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian... 80 3e-13
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [... 80 4e-13
>gb|ABR18382.1| unknown [Picea sitchensis]
Length = 358
Score = 93.6 bits (231), Expect = 2e-17
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY LPIRGD KY G WK T+ +HALHAE++CFEHPVT N+VK APLP+W ++
Sbjct: 297 LHCQYMGLPIRGDVKYEGPHIWKGITYANHALHAESLCFEHPVTNNMVKFHAPLPQWVME 356
Query: 275 SF 270
++
Sbjct: 357 AY 358
>ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [Amborella trichopoda]
gi|548859042|gb|ERN16743.1| hypothetical protein
AMTR_s00057p00025150 [Amborella trichopoda]
Length = 326
Score = 90.9 bits (224), Expect = 2e-16
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY +P+RGD KY G WK+ T+ HALHAE + F+HPVTG+L++ APLP WA +
Sbjct: 260 LHCQYLGIPLRGDVKYEGPHEWKEKTYDYHALHAENLSFDHPVTGSLMEFHAPLPSWARE 319
Query: 275 SFNCTVG 255
+ +CT G
Sbjct: 320 ALSCTKG 326
>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
Length = 308
Score = 84.3 bits (207), Expect = 2e-14
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY +PIRGD +Y GV WK + + SH LHAE++ FEHP+TG + L+APLP WA++
Sbjct: 242 LHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPITGKSMLLQAPLPSWAIQ 301
>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 321
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY + IRGD KY GV W+ T+ H LHAET+ FEHPVTG V LRAPLP WA++
Sbjct: 257 LHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLPSWAIQ 316
Query: 275 S 273
+
Sbjct: 317 A 317
>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
Length = 332
Score = 83.6 bits (205), Expect = 3e-14
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY +PIRGD +Y GV WK + SH LHAE++ FEHP+TG + L+APLP WA++
Sbjct: 272 LHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPITGKPMLLQAPLPSWAIQ 331
>ref|XP_003555184.1| PREDICTED: RNA pseudouridine synthase 1-like [Glycine max]
Length = 320
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/62 (62%), Positives = 43/62 (69%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY + I GD KY GV WK T +H LHAET+ FEHPVTG VKLRAPLP WA
Sbjct: 257 LHCQYLGISIVGDVKYEGVYEWKGTTHHAHHLHAETLSFEHPVTGLHVKLRAPLPPWATH 316
Query: 275 SF 270
+F
Sbjct: 317 AF 318
>ref|XP_002318955.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY +PIRGD KY GV WK T+ H LHAE++ EHPVTG + RAPLP WA +
Sbjct: 194 LHCQYLGIPIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPVTGQPLMFRAPLPVWATR 253
Query: 275 SFN 267
F+
Sbjct: 254 WFS 256
>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
[Cucumis sativus]
Length = 366
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY +PIRGD KY GV W + + SH LHAE++ F HPVTG +KL+APLP WA
Sbjct: 288 LHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWA 345
>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
Length = 366
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY +PIRGD KY GV W + + SH LHAE++ F HPVTG +KL+APLP WA
Sbjct: 288 LHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWA 345
>gb|ESW16990.1| hypothetical protein PHAVU_007G200900g [Phaseolus vulgaris]
Length = 315
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWALK 276
LHCQY + I GD KY GV WK T +H LHAET+ FEHPVTG V LRAPLP WA +
Sbjct: 252 LHCQYLGISIIGDVKYEGVYEWKGTTHHAHHLHAETLSFEHPVTGVDVMLRAPLPLWATQ 311
Query: 275 SF 270
+F
Sbjct: 312 AF 313
>gb|EMS63083.1| RNA pseudourine synthase 1 [Triticum urartu]
Length = 309
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY PIRGD KYGGV+ W HALHAE++ F HPVTG V RAPLP WA
Sbjct: 244 LHCQYLGFPIRGDVKYGGVIEWNGVDCDGHALHAESLSFVHPVTGLPVTFRAPLPSWA 301
>tpg|DAA55260.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
Length = 348
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY LPIRGD KYGGV+ W HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 283 LHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 340
>tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
Length = 340
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY LPIRGD KYGGV+ W HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 275 LHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 332
>gb|ACN27400.1| unknown [Zea mays]
Length = 315
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY LPIRGD KYGGV+ W HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 250 LHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 307
>gb|ACN26382.1| unknown [Zea mays]
Length = 307
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY LPIRGD KYGGV+ W HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 242 LHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 299
>ref|NP_001140548.1| hypothetical protein [Zea mays] gi|194699944|gb|ACF84056.1| unknown
[Zea mays] gi|414878126|tpg|DAA55257.1| TPA:
hypothetical protein ZEAMMB73_192305 [Zea mays]
gi|414878127|tpg|DAA55258.1| TPA: hypothetical protein
ZEAMMB73_192305 [Zea mays]
Length = 205
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY LPIRGD KYGGV+ W HALHAE++ F HP+TG + LR+PLP WA
Sbjct: 140 LHCQYLGLPIRGDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWA 197
>gb|AAG50905.1|AC069159_6 RNA pseudouridylate synthase, putative [Arabidopsis thaliana]
Length = 254
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY +PIRGD KY GV W TF H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 194 LHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 251
>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY +PIRGD KY GV W TF H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 233 LHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 290
>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
[Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
[Arabidopsis thaliana]
Length = 322
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY +PIRGD KY GV W TF H LHAE + +HPVTG+ + +RAPLP WA
Sbjct: 262 LHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWA 319
>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
vesca]
Length = 347
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -1
Query: 455 LHCQYARLPIRGDAKYGGVLTWKDDTFGSHALHAETVCFEHPVTGNLVKLRAPLPEWA 282
LHCQY + IRGD KY GV WK T+G H LHAE++ +HP+TG + RAPLP WA
Sbjct: 281 LHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPSWA 338