BLASTX nr result
ID: Ephedra27_contig00023907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023907
(669 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY04694.1| 5\'-3\' exonuclease family protein isoform 2, par... 118 2e-24
gb|EOY04693.1| 5\'-3\' exonuclease family protein isoform 1 [The... 118 2e-24
gb|EXB55207.1| DNA polymerase I [Morus notabilis] 116 7e-24
ref|XP_006478602.1| PREDICTED: uncharacterized protein LOC102609... 115 1e-23
ref|XP_006478601.1| PREDICTED: uncharacterized protein LOC102609... 115 1e-23
gb|EPS63003.1| hypothetical protein M569_11784, partial [Genlise... 115 2e-23
ref|XP_004234812.1| PREDICTED: DNA polymerase I-like [Solanum ly... 115 2e-23
ref|XP_006649667.1| PREDICTED: uncharacterized protein LOC102709... 114 3e-23
ref|XP_006366552.1| PREDICTED: uncharacterized protein LOC102600... 113 5e-23
ref|NP_001154673.1| 5'-3' exonuclease family protein [Arabidopsi... 113 5e-23
ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini... 113 5e-23
ref|NP_001078270.1| 5'-3' exonuclease family protein [Arabidopsi... 113 5e-23
ref|XP_004300520.1| PREDICTED: DNA polymerase I, thermostable-li... 113 6e-23
gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indi... 112 1e-22
gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like doma... 112 1e-22
ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group] g... 112 1e-22
ref|NP_190773.2| 5'-3' exonuclease family protein [Arabidopsis t... 112 1e-22
ref|XP_003608059.1| DNA polymerase I [Medicago truncatula] gi|35... 112 1e-22
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab... 112 1e-22
ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [S... 112 1e-22
>gb|EOY04694.1| 5\'-3\' exonuclease family protein isoform 2, partial [Theobroma
cacao]
Length = 365
Score = 118 bits (295), Expect = 2e-24
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SNNR+MLIDGTS+IYRAYYKL+A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 108 SNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFTALSLIIDVLEFVPSH 167
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 168 VAVVFDHDG 176
>gb|EOY04693.1| 5\'-3\' exonuclease family protein isoform 1 [Theobroma cacao]
Length = 440
Score = 118 bits (295), Expect = 2e-24
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SNNR+MLIDGTS+IYRAYYKL+A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 108 SNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFTALSLIIDVLEFVPSH 167
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 168 VAVVFDHDG 176
>gb|EXB55207.1| DNA polymerase I [Morus notabilis]
Length = 445
Score = 116 bits (290), Expect = 7e-24
Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Frame = +1
Query: 382 YSEK--TQFVKDTAHKFHDKSKAPSGSAVSNN----RLMLIDGTSIIYRAYYKLIASLHH 543
Y E+ T + K T HD + AV++N RLMLIDGTSIIYRAYYKL+A LHH
Sbjct: 81 YGERNATSYAKAT-FLHHDALLSSEERAVNDNPSDGRLMLIDGTSIIYRAYYKLLAKLHH 139
Query: 544 GAMEDADGNGDWALTFFRALSMILDMMEFYPSHMAVVFDHDG 669
G + ADGNGDW LT F ALS+I+D++EF PSH+AVVFDHDG
Sbjct: 140 GYLSHADGNGDWVLTVFTALSLIIDVLEFVPSHVAVVFDHDG 181
>ref|XP_006478602.1| PREDICTED: uncharacterized protein LOC102609974 isoform X2 [Citrus
sinensis]
Length = 421
Score = 115 bits (288), Expect = 1e-23
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SN R+MLIDGTSIIYRAYYK++A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 106 SNGRVMLIDGTSIIYRAYYKILAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSH 165
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 166 VAVVFDHDG 174
>ref|XP_006478601.1| PREDICTED: uncharacterized protein LOC102609974 isoform X1 [Citrus
sinensis]
Length = 439
Score = 115 bits (288), Expect = 1e-23
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SN R+MLIDGTSIIYRAYYK++A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 106 SNGRVMLIDGTSIIYRAYYKILAKLHHGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSH 165
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 166 VAVVFDHDG 174
>gb|EPS63003.1| hypothetical protein M569_11784, partial [Genlisea aurea]
Length = 92
Score = 115 bits (287), Expect = 2e-23
Identities = 55/81 (67%), Positives = 64/81 (79%)
Frame = +1
Query: 427 HDKSKAPSGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALS 606
HD A + S RLMLIDGT+IIYRAYYKLIA LHHG + +ADGNGDW LT F ALS
Sbjct: 14 HDNIAATTSH--SKGRLMLIDGTAIIYRAYYKLIAKLHHGHLPNADGNGDWVLTIFTALS 71
Query: 607 MILDMMEFYPSHMAVVFDHDG 669
+I+D++EF PSH+AVVFDHDG
Sbjct: 72 LIIDVLEFRPSHIAVVFDHDG 92
>ref|XP_004234812.1| PREDICTED: DNA polymerase I-like [Solanum lycopersicum]
Length = 436
Score = 115 bits (287), Expect = 2e-23
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SN +LMLIDGTSIIYRAYY+L+A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 86 SNGKLMLIDGTSIIYRAYYRLLAKLHHGHLSHADGNGDWVLTIFTALSLIIDVLEFLPSH 145
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 146 IAVVFDHDG 154
>ref|XP_006649667.1| PREDICTED: uncharacterized protein LOC102709347 [Oryza brachyantha]
Length = 421
Score = 114 bits (285), Expect = 3e-23
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = +1
Query: 430 DKSKAPSGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSM 609
D S + + + S +R+ML+DGTS++YR+YYK++A L HG +E ADGNGDW LT F+ALS+
Sbjct: 78 DPSNSVARADPSKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSL 137
Query: 610 ILDMMEFYPSHMAVVFDHDG 669
ILDM+EF PSH AVVFDHDG
Sbjct: 138 ILDMLEFIPSHAAVVFDHDG 157
>ref|XP_006366552.1| PREDICTED: uncharacterized protein LOC102600473 [Solanum tuberosum]
Length = 430
Score = 113 bits (283), Expect = 5e-23
Identities = 50/69 (72%), Positives = 59/69 (85%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SN +LMLIDGTSIIYRAYY+L+A LHHG + ADGNGDW LT F ALS+I+D++EF PSH
Sbjct: 86 SNGKLMLIDGTSIIYRAYYRLLAKLHHGHLSHADGNGDWVLTIFTALSLIIDVLEFLPSH 145
Query: 643 MAVVFDHDG 669
+ VVFDHDG
Sbjct: 146 IVVVFDHDG 154
>ref|NP_001154673.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332645362|gb|AEE78883.1| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
Length = 365
Score = 113 bits (283), Expect = 5e-23
Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +1
Query: 154 FTDYISLHFLREKMTCSWFAQHSPSFLRYLSSPTLFRCLKTRIISSQEITVRKELAVRCF 333
F+D ++LH HS R L P L R S ++ + C
Sbjct: 20 FSDVMTLHLYH----------HSRFLWRNLCFPRSVGNLCNRNCSLISPSLARSAKYYCS 69
Query: 334 CAHTGLLSKESLKEGNYSEKTQFVKDTAHKFHDKS--KAPSGSAVSNNRLMLIDGTSIIY 507
S E+ + ++ V + K+ KS + S +A SN R+MLIDGTSIIY
Sbjct: 70 SVAVSEFSNEAASGSTLTSISEDVTPQSIKYPFKSEERVASTAASSNGRVMLIDGTSIIY 129
Query: 508 RAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSHMAVVFDHDG 669
RAYYKL+A L+HG + ADGN DW LT F +LS+++D+++F PSH+AVVFDHDG
Sbjct: 130 RAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSHVAVVFDHDG 183
>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
gi|296084279|emb|CBI24667.3| unnamed protein product
[Vitis vinifera]
Length = 441
Score = 113 bits (283), Expect = 5e-23
Identities = 69/151 (45%), Positives = 86/151 (56%)
Frame = +1
Query: 217 HSPSFLRYLSSPTLFRCLKTRIISSQEITVRKELAVRCFCAHTGLLSKESLKEGNYSEKT 396
HSPS L TL L + I E+A +T + SK K +
Sbjct: 45 HSPSILSRKGCCTLSNSLDSSI---------HEVAHTISYGNTTISSKSERKLCQGA--- 92
Query: 397 QFVKDTAHKFHDKSKAPSGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGD 576
FV HK + + SN R+MLIDGTSIIYRAYYKL+A LHHG + ADGNGD
Sbjct: 93 -FVDSVDHK-----ERKMDISSSNGRVMLIDGTSIIYRAYYKLLAKLHHGYLSHADGNGD 146
Query: 577 WALTFFRALSMILDMMEFYPSHMAVVFDHDG 669
W LT F ALS+I+D+++F PSH+AVVFDH+G
Sbjct: 147 WVLTIFAALSLIVDVLDFIPSHVAVVFDHNG 177
>ref|NP_001078270.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332645360|gb|AEE78881.1| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
Length = 448
Score = 113 bits (283), Expect = 5e-23
Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +1
Query: 154 FTDYISLHFLREKMTCSWFAQHSPSFLRYLSSPTLFRCLKTRIISSQEITVRKELAVRCF 333
F+D ++LH HS R L P L R S ++ + C
Sbjct: 20 FSDVMTLHLYH----------HSRFLWRNLCFPRSVGNLCNRNCSLISPSLARSAKYYCS 69
Query: 334 CAHTGLLSKESLKEGNYSEKTQFVKDTAHKFHDKS--KAPSGSAVSNNRLMLIDGTSIIY 507
S E+ + ++ V + K+ KS + S +A SN R+MLIDGTSIIY
Sbjct: 70 SVAVSEFSNEAASGSTLTSISEDVTPQSIKYPFKSEERVASTAASSNGRVMLIDGTSIIY 129
Query: 508 RAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSHMAVVFDHDG 669
RAYYKL+A L+HG + ADGN DW LT F +LS+++D+++F PSH+AVVFDHDG
Sbjct: 130 RAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSHVAVVFDHDG 183
>ref|XP_004300520.1| PREDICTED: DNA polymerase I, thermostable-like [Fragaria vesca
subsp. vesca]
Length = 425
Score = 113 bits (282), Expect = 6e-23
Identities = 50/69 (72%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
SN R+MLIDGTSIIYR+YYKL+A LHHG + ADGNGDW LT F ALS+I+D+++F PSH
Sbjct: 89 SNGRVMLIDGTSIIYRSYYKLLAKLHHGHLTHADGNGDWVLTIFTALSLIIDVLKFVPSH 148
Query: 643 MAVVFDHDG 669
+AVVFDHDG
Sbjct: 149 VAVVFDHDG 157
>gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indica Group]
Length = 421
Score = 112 bits (280), Expect = 1e-22
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
S +R+ML+DGTS++YR+YYK++A L HG +E ADGNGDW LT F+ALS++LDM+EF PSH
Sbjct: 89 SKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSLVLDMLEFIPSH 148
Query: 643 MAVVFDHDG 669
AVVFDHDG
Sbjct: 149 AAVVFDHDG 157
>gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
protein, expressed [Oryza sativa Japonica Group]
Length = 416
Score = 112 bits (280), Expect = 1e-22
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
S +R+ML+DGTS++YR+YYK++A L HG +E ADGNGDW LT F+ALS++LDM+EF PSH
Sbjct: 84 SKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSLVLDMLEFIPSH 143
Query: 643 MAVVFDHDG 669
AVVFDHDG
Sbjct: 144 AAVVFDHDG 152
>ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group]
gi|108706959|gb|ABF94754.1| 5'-3' exonuclease,
N-terminal resolvase-like domain containing protein,
expressed [Oryza sativa Japonica Group]
gi|113547915|dbj|BAF11358.1| Os03g0227300 [Oryza sativa
Japonica Group] gi|215704203|dbj|BAG93043.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222624502|gb|EEE58634.1| hypothetical protein
OsJ_10000 [Oryza sativa Japonica Group]
Length = 421
Score = 112 bits (280), Expect = 1e-22
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
S +R+ML+DGTS++YR+YYK++A L HG +E ADGNGDW LT F+ALS++LDM+EF PSH
Sbjct: 89 SKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSLVLDMLEFIPSH 148
Query: 643 MAVVFDHDG 669
AVVFDHDG
Sbjct: 149 AAVVFDHDG 157
>ref|NP_190773.2| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|145362483|ref|NP_974414.2| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
thaliana] gi|332645358|gb|AEE78879.1| 5'-3' exonuclease
family protein [Arabidopsis thaliana]
gi|332645359|gb|AEE78880.1| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
Length = 425
Score = 112 bits (279), Expect = 1e-22
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +1
Query: 418 HKFHDKSKAPSGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFR 597
+ F + + S +A SN R+MLIDGTSIIYRAYYKL+A L+HG + ADGN DW LT F
Sbjct: 77 YPFKSEERVASTAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFS 136
Query: 598 ALSMILDMMEFYPSHMAVVFDHDG 669
+LS+++D+++F PSH+AVVFDHDG
Sbjct: 137 SLSLLIDVLKFLPSHVAVVFDHDG 160
>ref|XP_003608059.1| DNA polymerase I [Medicago truncatula] gi|355509114|gb|AES90256.1|
DNA polymerase I [Medicago truncatula]
Length = 491
Score = 112 bits (279), Expect = 1e-22
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +1
Query: 448 SGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMME 627
+ A +N R+MLIDGTS+I+RAYYKL+A LHHG + ADGNGDW LT F ALS I+D++E
Sbjct: 102 NADAAANGRVMLIDGTSVIHRAYYKLLAKLHHGHLAHADGNGDWVLTIFSALSFIIDVLE 161
Query: 628 FYPSHMAVVFDHDG 669
F PSH+ VVFDHDG
Sbjct: 162 FIPSHVVVVFDHDG 175
>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 112 bits (279), Expect = 1e-22
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +1
Query: 418 HKFHDKSKAPSGSAVSNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFR 597
+ F + + S +A SN R+MLIDGTSIIYRAYYKL+A L+HG + ADGN DW LT F
Sbjct: 106 YPFKSEERVASTAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFS 165
Query: 598 ALSMILDMMEFYPSHMAVVFDHDG 669
+LS+++D+++F PSH+AVVFDHDG
Sbjct: 166 SLSLLIDVLKFLPSHVAVVFDHDG 189
>ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
gi|241919454|gb|EER92598.1| hypothetical protein
SORBIDRAFT_01g041870 [Sorghum bicolor]
Length = 421
Score = 112 bits (279), Expect = 1e-22
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +1
Query: 463 SNNRLMLIDGTSIIYRAYYKLIASLHHGAMEDADGNGDWALTFFRALSMILDMMEFYPSH 642
S +R+ML+DGTS++YR+YYK++A L HG +E ADGNGDW LT F+ALS++LDM+EF PSH
Sbjct: 90 SKSRIMLVDGTSVMYRSYYKILAQLQHGQLEHADGNGDWVLTIFKALSLLLDMLEFIPSH 149
Query: 643 MAVVFDHDG 669
AVVFDHDG
Sbjct: 150 AAVVFDHDG 158