BLASTX nr result
ID: Ephedra27_contig00023881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023881
(531 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [A... 75 1e-11
ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Sela... 64 2e-08
ref|XP_002519191.1| pentatricopeptide repeat-containing protein,... 64 3e-08
ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|XP_006595138.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
gb|EOY06667.1| Pentatricopeptide (PPR) domain protein 40, putati... 62 1e-07
ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Sela... 62 1e-07
ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_004233837.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selag... 61 1e-07
ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Sela... 61 1e-07
ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat... 61 2e-07
gb|EMJ18184.1| hypothetical protein PRUPE_ppa002680mg [Prunus pe... 61 2e-07
ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selag... 61 2e-07
ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selag... 61 2e-07
ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
gb|ESW22660.1| hypothetical protein PHAVU_005G171500g [Phaseolus... 60 3e-07
>ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [Amborella trichopoda]
gi|548862959|gb|ERN20315.1| hypothetical protein
AMTR_s00066p00184190 [Amborella trichopoda]
Length = 721
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -3
Query: 493 LLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYSLV 341
+LK G+ PDHYTYNAF+KVLC+ R DEAK L+ +ME NGC PN +Y L+
Sbjct: 641 MLKSGVTPDHYTYNAFIKVLCNSKRTDEAKELLGVMEANGCVPNCYSYGLI 691
>ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein
SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 63.9 bits (154), Expect = 2e-08
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = -3
Query: 517 EVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYSLVR 338
+ +R+++D+ K G+ PD TYN + LC +++EA L+++M E CAP+ VTYS++
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 337 NGI 329
NG+
Sbjct: 380 NGL 382
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK D ++K +L+ PD TY + + C + +DEA+ LM+ M+E+G P+TV Y
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 349 SLVRNGIVLPNHSQDVS 299
+ + NG+ N ++VS
Sbjct: 201 NALLNGLCKQNQLEEVS 217
>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 719
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK ++ ++ +L +G+ PD+YTY AF+KV C R +EAK L ME NGC P++ T
Sbjct: 616 GKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTC 675
Query: 349 SLVRNGIV 326
+++ + +V
Sbjct: 676 NIILDALV 683
>ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565377884|ref|XP_006355397.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like isoform X2 [Solanum
tuberosum]
Length = 709
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/74 (37%), Positives = 47/74 (63%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K DE R++ +L + + PD++TY AF++ LC+ R DEAK+L ME NGC P+ +T
Sbjct: 615 KIDEAQRLLISMLTLDLIPDNHTYGAFIRALCNLGRFDEAKNLFFSMEANGCVPDDLTCK 674
Query: 346 LVRNGIVLPNHSQD 305
L + ++ H+++
Sbjct: 675 LYLDSLIQSGHTKE 688
>ref|XP_006595138.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X2 [Glycine max]
Length = 607
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ +E + ++ K+G PD Y YNA M + RMDEA SL + MEENGC P+ ++
Sbjct: 460 GRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSH 519
Query: 349 SLVRNGI 329
+++ NG+
Sbjct: 520 NIILNGL 526
>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X1 [Glycine max]
Length = 631
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ +E + ++ K+G PD Y YNA M + RMDEA SL + MEENGC P+ ++
Sbjct: 484 GRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSH 543
Query: 349 SLVRNGI 329
+++ NG+
Sbjct: 544 NIILNGL 550
>gb|EOY06667.1| Pentatricopeptide (PPR) domain protein 40, putative [Theobroma
cacao]
Length = 679
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K ++ ++ +L++G+ PD+YTY AF+K LC+ R DE +++ ME GC P++ T +
Sbjct: 585 KIEKAEKLFNSMLRLGLDPDNYTYGAFIKALCESERFDEVIRMLKSMEAKGCIPDSYTCN 644
Query: 346 LVRNGIV 326
LV +V
Sbjct: 645 LVLESLV 651
>ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein
SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK D+ R+V+D++ G P+ TY++ + LC ++DEA +L+Q M +GC+PN VTY
Sbjct: 962 GKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021
Query: 349 SLVRNG 332
+ + +G
Sbjct: 1022 NTIIDG 1027
>ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum tuberosum]
Length = 775
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ E +++D+ G++PD YN +K CD +D+A+SL + EN C P+T TY
Sbjct: 344 GRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDVGILDQARSLQLEISENDCFPDTYTY 403
Query: 349 SLV-----RNGIV-----LPNHSQDVSCF*QHIDG*VVVCGLC 251
S+V RNG+V + N + + CF + ++ GLC
Sbjct: 404 SIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLC 446
>ref|XP_004233837.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Solanum lycopersicum]
Length = 479
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/79 (36%), Positives = 40/79 (50%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G D FR+ ++ K G PD YTY + LC + EAK L+ ME NGC+P VTY
Sbjct: 170 GTMDSAFRIFHEMPKRGFSPDSYTYGTLINGLCKLGKATEAKKLLMEMEANGCSPTVVTY 229
Query: 349 SLVRNGIVLPNHSQDVSCF 293
+ + G N+ + F
Sbjct: 230 TCLIRGFCQSNNLDEAMTF 248
>ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum lycopersicum]
Length = 753
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ E +++D+ G++PD YN +K CD +D+A+SL + EN C P+T TY
Sbjct: 322 GRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSLQLEISENDCFPDTYTY 381
Query: 349 SLV-----RNGIV-----LPNHSQDVSCF*QHIDG*VVVCGLC 251
S+V RNG+V + N + + CF + ++ GLC
Sbjct: 382 SIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLC 424
>ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein
SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K D+ ++++++ K+G PD TYN + LC + +D+A L M +NGCAP+ V+YS
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366
Query: 346 LVRNGIVLPNHSQD 305
+V NG+ N D
Sbjct: 367 VVLNGLCKTNKVHD 380
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K DE ++ KD++ G PD TYN+ + L MDEA+ + + M ++GCAPN TYS
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261
Query: 346 LVRNG 332
+V +G
Sbjct: 262 IVLSG 266
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK E MV+++ + G+ PD TY + LC ++DEA L M E GC+ NTV Y
Sbjct: 24 GKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAY 83
Query: 349 SLVRNGI 329
+ + NG+
Sbjct: 84 NALINGL 90
>ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein
SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K D+ ++++++ K+G PD TYN + LC + +D+A L M +NGCAP+ V+YS
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363
Query: 346 LVRNGIVLPNHSQD 305
+V NG+ N D
Sbjct: 364 VVLNGLCKTNKVHD 377
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK DE ++ KD++ G PD TYN+ + L MDEA+ + + M +GCAPN TY
Sbjct: 233 GKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292
Query: 349 SLVRNG 332
S+V +G
Sbjct: 293 SIVLSG 298
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ DE R+ ++++ +G++P YTYN+ + C +M EA L + M E G P+ VTY
Sbjct: 57 GRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTY 116
Query: 349 SLVRNGI 329
S + +G+
Sbjct: 117 STIISGL 123
>ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like isoform X1 [Cicer
arietinum] gi|502154141|ref|XP_004509598.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like isoform X2 [Cicer
arietinum] gi|502154144|ref|XP_004509599.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like isoform X3 [Cicer
arietinum]
Length = 674
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/74 (32%), Positives = 48/74 (64%)
Frame = -3
Query: 526 KHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTYS 347
K ++ ++ + +LK G+ PD+YTY+AF++ L R+D+AK + ME NGC+P++ +
Sbjct: 580 KVEKAQKLFESMLKSGLNPDNYTYSAFIEALSQSGRLDDAKKIFYSMEANGCSPDSYLCN 639
Query: 346 LVRNGIVLPNHSQD 305
L+ ++ +H ++
Sbjct: 640 LIVKTLIRQDHVEE 653
>gb|EMJ18184.1| hypothetical protein PRUPE_ppa002680mg [Prunus persica]
Length = 645
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ DE + ++ K+G PD Y YNA M + +DEA SL+++MEENGC P+ +
Sbjct: 490 GRLDEALDLFNEMKKLGCTPDVYAYNALMSGMVRAGMIDEAHSLLKVMEENGCIPDLNSQ 549
Query: 349 SLVRNGI 329
+++ NG+
Sbjct: 550 NIILNGL 556
>ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein
SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ E ++V+D++K+G+ PD Y+A + L D +D A + Q M + GCAPN VTY
Sbjct: 763 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 822
Query: 349 SLVRNGIVLPNHSQDVSCF*QH 284
++R G + D+ QH
Sbjct: 823 KVLRRGFRAAGRALDLEAVKQH 844
>ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein
SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ E ++V+D++K+G+ PD Y+A + L D +D A + Q M + GCAPN VTY
Sbjct: 508 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 567
Query: 349 SLVRNGIVLPNHSQDVSCF*QH 284
++R G + D+ QH
Sbjct: 568 KVLRRGFRAAGRALDLEAVKQH 589
>ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ DE + ++++++K G+ P+ YT+N+ M L +DEA Q M+E C+PNT TY
Sbjct: 679 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTY 738
Query: 349 SLVRNGI 329
S++ NG+
Sbjct: 739 SILINGL 745
>ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 590
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
GK ++ + K L +G+ PD TY + C DEAK +++ ME+NGC+PN VTY
Sbjct: 470 GKLNKAHAVFKKLSFIGLLPDVRTYTIMINGFCFEGLFDEAKYILRKMEDNGCSPNNVTY 529
Query: 349 SLVRNGIVLPNHSQDVSCF*QHIDG 275
+++ G + N +++ F + +DG
Sbjct: 530 NVIVQGFLRCNKISEMASFMKEMDG 554
>gb|ESW22660.1| hypothetical protein PHAVU_005G171500g [Phaseolus vulgaris]
Length = 632
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = -3
Query: 529 GKHDEVFRMVKDLLKMGMKPDHYTYNAFMKVLCDGHRMDEAKSLMQIMEENGCAPNTVTY 350
G+ +E + ++ K+G PD Y YNA M + R+DE SL + MEENGC+P+ ++
Sbjct: 485 GRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERVDEVFSLFRAMEENGCSPDINSH 544
Query: 349 SLVRNGI 329
++V NG+
Sbjct: 545 NIVLNGL 551