BLASTX nr result

ID: Ephedra27_contig00023785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00023785
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]       80   3e-13
ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261...    77   3e-12
gb|ADE76094.1| unknown [Picea sitchensis]                              77   3e-12
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [...    77   3e-12
ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuber...    77   3e-12
ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein ...    76   5e-12
ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [S...    75   9e-12
ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selag...    75   1e-11
gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]        74   2e-11
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin...    74   2e-11
gb|EOY22075.1| Glycine-rich RNA-binding protein 3 [Theobroma cacao]    74   3e-11
gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [The...    74   3e-11
gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [The...    74   3e-11
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe...    74   3e-11
ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein ...    74   3e-11
ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein ...    74   3e-11
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    74   3e-11
ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein ...    73   3e-11
gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus...    73   3e-11
gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberos...    73   3e-11

>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
          Length = 277

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
 Frame = +3

Query: 204 ISKRINIVRSLT----FLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVN 371
           +SK  N+  S +    F   R   SS+L++GGLSYGT+E  LK+AFS YGD++   V+++
Sbjct: 15  VSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMD 74

Query: 372 RQTGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           R TGRS+GFGF+            Q MDGQ L G
Sbjct: 75  RDTGRSRGFGFISFPSSEEAASALQAMDGQDLHG 108


>ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261381 [Solanum
           lycopersicum]
          Length = 333

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +3

Query: 252 RKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXX 431
           R   SS+L++GGLSYGT+E  LK+ FS YG+++   V+++R+TGRS+GFGF+        
Sbjct: 35  RSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEA 94

Query: 432 XXXXQVMDGQCLDG 473
               Q MDGQ L G
Sbjct: 95  TSAMQAMDGQDLHG 108


>gb|ADE76094.1| unknown [Picea sitchensis]
          Length = 150

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/94 (42%), Positives = 55/94 (58%)
 Frame = +3

Query: 192 IFLQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVN 371
           +F  I+   N +     L      + +L++GGLS+ TNE+VL+ AFS YG+IL V V++N
Sbjct: 10  LFRGITPNTNRLIGRLALVHSSGLNKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIIN 69

Query: 372 RQTGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           R +G SKGFGFV            + MDGQ LDG
Sbjct: 70  RASGLSKGFGFVQFASETDAVNALKEMDGQSLDG 103


>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 134

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/90 (43%), Positives = 54/90 (60%)
 Frame = +3

Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
           +S  +N +R ++        SS+L+IGGLSYGTN++ LK AFS +GD++   V+ +R TG
Sbjct: 23  VSSMLNSIRCMS--------SSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTG 74

Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           RS+GFGFV              MDGQ L G
Sbjct: 75  RSRGFGFVDFSSVDSASSALSAMDGQELHG 104


>ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuberosum]
           gi|15822705|gb|AAL07519.1| RNA-binding protein precursor
           [Solanum tuberosum]
          Length = 339

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +3

Query: 252 RKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXX 431
           R   SS+L++GGLSYGT+E  LK+ FS YG+++   V+++R+TGRS+GFGF+        
Sbjct: 35  RSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEA 94

Query: 432 XXXXQVMDGQCLDG 473
               Q MDGQ L G
Sbjct: 95  TSAMQAMDGQDLHG 108


>ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
           [Solanum tuberosum]
          Length = 303

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           SS+L++GGLSYGT+E  LK+ FS YG+++   V+++R+TGRS+GFGF+            
Sbjct: 3   SSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAM 62

Query: 444 QVMDGQCLDG 473
           Q MDGQ L G
Sbjct: 63  QAMDGQDLHG 72


>ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
           gi|241929006|gb|EES02151.1| hypothetical protein
           SORBIDRAFT_03g047450 [Sorghum bicolor]
          Length = 146

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 37/70 (52%), Positives = 45/70 (64%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           SS L+IGGLSY TNE  LK AFS YGD++ V V+ +  TG+SKGFGFV            
Sbjct: 58  SSNLFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAAL 117

Query: 444 QVMDGQCLDG 473
           Q ++GQ LDG
Sbjct: 118 QKLNGQVLDG 127


>ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
           gi|302814304|ref|XP_002988836.1| hypothetical protein
           SELMODRAFT_128832 [Selaginella moellendorffii]
           gi|300143407|gb|EFJ10098.1| hypothetical protein
           SELMODRAFT_128832 [Selaginella moellendorffii]
           gi|300168290|gb|EFJ34894.1| hypothetical protein
           SELMODRAFT_81392 [Selaginella moellendorffii]
          Length = 149

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/71 (49%), Positives = 49/71 (69%)
 Frame = +3

Query: 261 FSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXX 440
           FSS+L+IGGL++GT E  L+ AFS +G+I+ V V+ +R+TGRS+GFGFV           
Sbjct: 35  FSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKA 94

Query: 441 XQVMDGQCLDG 473
            + MDG+ LDG
Sbjct: 95  MEAMDGRVLDG 105


>gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]
          Length = 127

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/82 (43%), Positives = 53/82 (64%)
 Frame = +3

Query: 228 RSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFV 407
           +SL F+  R   S++L+IGGLSYGT+++ L+ AFS++GD+    V+ +R +GRS+GFGFV
Sbjct: 19  QSLMFMTARS-MSTKLFIGGLSYGTDDQTLRDAFSSFGDVTDARVITDRDSGRSRGFGFV 77

Query: 408 XXXXXXXXXXXXQVMDGQCLDG 473
                         MDGQ L+G
Sbjct: 78  NFSSDESASSALSAMDGQQLNG 99


>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
           gi|255631812|gb|ACU16273.1| unknown [Glycine max]
          Length = 138

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/90 (40%), Positives = 55/90 (61%)
 Frame = +3

Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
           +S  +N +R ++        SS+L+IGGLSYG +++ LK AFS +GD++  +V+ +R +G
Sbjct: 23  VSSMLNYIRCMS--------SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSG 74

Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           RS+GFGFV              MDG+ LDG
Sbjct: 75  RSRGFGFVNFSNDESASSALSAMDGKDLDG 104


>gb|EOY22075.1| Glycine-rich RNA-binding protein 3 [Theobroma cacao]
          Length = 383

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/70 (45%), Positives = 48/70 (68%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           SS+L++GG+SY T+++ LK+AF  YG+++   V+V+R+TGRS+GFGFV            
Sbjct: 115 SSKLFVGGISYSTDDQSLKEAFGKYGEVIEARVIVDRETGRSRGFGFVTYTSTEDASSAL 174

Query: 444 QVMDGQCLDG 473
           Q +DGQ L G
Sbjct: 175 QALDGQVLHG 184


>gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [Theobroma cacao]
          Length = 156

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/92 (38%), Positives = 56/92 (60%)
 Frame = +3

Query: 198 LQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQ 377
           + I+  +N +R ++        + +L+IGGLSYGT+++ LK+AFS +GD+    ++++R 
Sbjct: 34  MPITSMLNSIRCMS------TSTKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRD 87

Query: 378 TGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           TGRS+GFGFV              MDGQ L+G
Sbjct: 88  TGRSRGFGFVNFADDQSASNALSAMDGQELNG 119


>gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [Theobroma cacao]
          Length = 139

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/92 (38%), Positives = 56/92 (60%)
 Frame = +3

Query: 198 LQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQ 377
           + I+  +N +R ++        + +L+IGGLSYGT+++ LK+AFS +GD+    ++++R 
Sbjct: 17  MPITSMLNSIRCMS------TSTKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRD 70

Query: 378 TGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           TGRS+GFGFV              MDGQ L+G
Sbjct: 71  TGRSRGFGFVNFADDQSASNALSAMDGQELNG 102


>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
          Length = 135

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/79 (44%), Positives = 51/79 (64%)
 Frame = +3

Query: 237 TFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXX 416
           + L   +  SS+L+IGGLS+GT++E LK+AFS++GD+    V+++R TG+S+GFGFV   
Sbjct: 25  SMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFA 84

Query: 417 XXXXXXXXXQVMDGQCLDG 473
                      MDGQ L G
Sbjct: 85  SDESASSALNAMDGQELHG 103


>ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 173

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/86 (39%), Positives = 57/86 (66%)
 Frame = +3

Query: 216 INIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKG 395
           +++ ++L F+      SS++++GGLSYGT+++ L +AF+ YG+++   V+++R TGRS+G
Sbjct: 28  LSVFQTLRFMS-----SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRG 82

Query: 396 FGFVXXXXXXXXXXXXQVMDGQCLDG 473
           FGFV            Q +DGQ LDG
Sbjct: 83  FGFVTFGASEDASSAIQALDGQDLDG 108


>ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 171

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/86 (39%), Positives = 57/86 (66%)
 Frame = +3

Query: 216 INIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKG 395
           +++ ++L F+      SS++++GGLSYGT+++ L +AF+ YG+++   V+++R TGRS+G
Sbjct: 28  LSVFQTLRFMS-----SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRG 82

Query: 396 FGFVXXXXXXXXXXXXQVMDGQCLDG 473
           FGFV            Q +DGQ LDG
Sbjct: 83  FGFVTFGASEDASSAIQALDGQDLDG 108


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           S++L+IGGLSYGT+++ LK AFS++GD++   V+ +R TGRS+GFGFV            
Sbjct: 39  SAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSAL 98

Query: 444 QVMDGQCLDG 473
             MDGQ L+G
Sbjct: 99  SAMDGQELNG 108


>ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Solanum tuberosum]
          Length = 145

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/70 (45%), Positives = 50/70 (71%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           SSRL++GGLS+GT+++ LK+AF+++GD++  +V+++R +GRS+GFGFV            
Sbjct: 38  SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97

Query: 444 QVMDGQCLDG 473
             MDGQ L G
Sbjct: 98  NAMDGQQLHG 107


>gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
          Length = 135

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
           +S  +N +R ++        SS+L++GGLSYG +++ L+ AF+ YGD++   V+ +R TG
Sbjct: 23  VSSMLNYIRCMS--------SSKLFVGGLSYGVDDQSLRDAFAGYGDVVEARVITDRDTG 74

Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
           RS+GFGFV              MDGQ L+G
Sbjct: 75  RSRGFGFVNFSSDESATSALSAMDGQDLNG 104


>gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
           gi|76160996|gb|ABA40461.1| RNA binding protein-like
           protein [Solanum tuberosum]
          Length = 150

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/70 (45%), Positives = 50/70 (71%)
 Frame = +3

Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
           SSRL++GGLS+GT+++ LK+AF+++GD++  +V+++R +GRS+GFGFV            
Sbjct: 38  SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97

Query: 444 QVMDGQCLDG 473
             MDGQ L G
Sbjct: 98  NAMDGQQLHG 107


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