BLASTX nr result
ID: Ephedra27_contig00023785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023785
(475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum] 80 3e-13
ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261... 77 3e-12
gb|ADE76094.1| unknown [Picea sitchensis] 77 3e-12
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [... 77 3e-12
ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuber... 77 3e-12
ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein ... 76 5e-12
ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [S... 75 9e-12
ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selag... 75 1e-11
gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea] 74 2e-11
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin... 74 2e-11
gb|EOY22075.1| Glycine-rich RNA-binding protein 3 [Theobroma cacao] 74 3e-11
gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [The... 74 3e-11
gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [The... 74 3e-11
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe... 74 3e-11
ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein ... 73 3e-11
gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus... 73 3e-11
gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberos... 73 3e-11
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Frame = +3
Query: 204 ISKRINIVRSLT----FLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVN 371
+SK N+ S + F R SS+L++GGLSYGT+E LK+AFS YGD++ V+++
Sbjct: 15 VSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMD 74
Query: 372 RQTGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
R TGRS+GFGF+ Q MDGQ L G
Sbjct: 75 RDTGRSRGFGFISFPSSEEAASALQAMDGQDLHG 108
>ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261381 [Solanum
lycopersicum]
Length = 333
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 252 RKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXX 431
R SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF+
Sbjct: 35 RSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEA 94
Query: 432 XXXXQVMDGQCLDG 473
Q MDGQ L G
Sbjct: 95 TSAMQAMDGQDLHG 108
>gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +3
Query: 192 IFLQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVN 371
+F I+ N + L + +L++GGLS+ TNE+VL+ AFS YG+IL V V++N
Sbjct: 10 LFRGITPNTNRLIGRLALVHSSGLNKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIIN 69
Query: 372 RQTGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
R +G SKGFGFV + MDGQ LDG
Sbjct: 70 RASGLSKGFGFVQFASETDAVNALKEMDGQSLDG 103
>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 134
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = +3
Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
+S +N +R ++ SS+L+IGGLSYGTN++ LK AFS +GD++ V+ +R TG
Sbjct: 23 VSSMLNSIRCMS--------SSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTG 74
Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
RS+GFGFV MDGQ L G
Sbjct: 75 RSRGFGFVDFSSVDSASSALSAMDGQELHG 104
>ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuberosum]
gi|15822705|gb|AAL07519.1| RNA-binding protein precursor
[Solanum tuberosum]
Length = 339
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 252 RKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXX 431
R SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF+
Sbjct: 35 RSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEA 94
Query: 432 XXXXQVMDGQCLDG 473
Q MDGQ L G
Sbjct: 95 TSAMQAMDGQDLHG 108
>ref|XP_006338370.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
[Solanum tuberosum]
Length = 303
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
SS+L++GGLSYGT+E LK+ FS YG+++ V+++R+TGRS+GFGF+
Sbjct: 3 SSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAM 62
Query: 444 QVMDGQCLDG 473
Q MDGQ L G
Sbjct: 63 QAMDGQDLHG 72
>ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein
SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/70 (52%), Positives = 45/70 (64%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
SS L+IGGLSY TNE LK AFS YGD++ V V+ + TG+SKGFGFV
Sbjct: 58 SSNLFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAAL 117
Query: 444 QVMDGQCLDG 473
Q ++GQ LDG
Sbjct: 118 QKLNGQVLDG 127
>ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein
SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein
SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein
SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +3
Query: 261 FSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXX 440
FSS+L+IGGL++GT E L+ AFS +G+I+ V V+ +R+TGRS+GFGFV
Sbjct: 35 FSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKA 94
Query: 441 XQVMDGQCLDG 473
+ MDG+ LDG
Sbjct: 95 MEAMDGRVLDG 105
>gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]
Length = 127
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 228 RSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFV 407
+SL F+ R S++L+IGGLSYGT+++ L+ AFS++GD+ V+ +R +GRS+GFGFV
Sbjct: 19 QSLMFMTARS-MSTKLFIGGLSYGTDDQTLRDAFSSFGDVTDARVITDRDSGRSRGFGFV 77
Query: 408 XXXXXXXXXXXXQVMDGQCLDG 473
MDGQ L+G
Sbjct: 78 NFSSDESASSALSAMDGQQLNG 99
>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +3
Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
+S +N +R ++ SS+L+IGGLSYG +++ LK AFS +GD++ +V+ +R +G
Sbjct: 23 VSSMLNYIRCMS--------SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSG 74
Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
RS+GFGFV MDG+ LDG
Sbjct: 75 RSRGFGFVNFSNDESASSALSAMDGKDLDG 104
>gb|EOY22075.1| Glycine-rich RNA-binding protein 3 [Theobroma cacao]
Length = 383
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
SS+L++GG+SY T+++ LK+AF YG+++ V+V+R+TGRS+GFGFV
Sbjct: 115 SSKLFVGGISYSTDDQSLKEAFGKYGEVIEARVIVDRETGRSRGFGFVTYTSTEDASSAL 174
Query: 444 QVMDGQCLDG 473
Q +DGQ L G
Sbjct: 175 QALDGQVLHG 184
>gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [Theobroma cacao]
Length = 156
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +3
Query: 198 LQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQ 377
+ I+ +N +R ++ + +L+IGGLSYGT+++ LK+AFS +GD+ ++++R
Sbjct: 34 MPITSMLNSIRCMS------TSTKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRD 87
Query: 378 TGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
TGRS+GFGFV MDGQ L+G
Sbjct: 88 TGRSRGFGFVNFADDQSASNALSAMDGQELNG 119
>gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [Theobroma cacao]
Length = 139
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +3
Query: 198 LQISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQ 377
+ I+ +N +R ++ + +L+IGGLSYGT+++ LK+AFS +GD+ ++++R
Sbjct: 17 MPITSMLNSIRCMS------TSTKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRD 70
Query: 378 TGRSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
TGRS+GFGFV MDGQ L+G
Sbjct: 71 TGRSRGFGFVNFADDQSASNALSAMDGQELNG 102
>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
Length = 135
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +3
Query: 237 TFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXX 416
+ L + SS+L+IGGLS+GT++E LK+AFS++GD+ V+++R TG+S+GFGFV
Sbjct: 25 SMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFA 84
Query: 417 XXXXXXXXXQVMDGQCLDG 473
MDGQ L G
Sbjct: 85 SDESASSALNAMDGQELHG 103
>ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/86 (39%), Positives = 57/86 (66%)
Frame = +3
Query: 216 INIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKG 395
+++ ++L F+ SS++++GGLSYGT+++ L +AF+ YG+++ V+++R TGRS+G
Sbjct: 28 LSVFQTLRFMS-----SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRG 82
Query: 396 FGFVXXXXXXXXXXXXQVMDGQCLDG 473
FGFV Q +DGQ LDG
Sbjct: 83 FGFVTFGASEDASSAIQALDGQDLDG 108
>ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/86 (39%), Positives = 57/86 (66%)
Frame = +3
Query: 216 INIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKG 395
+++ ++L F+ SS++++GGLSYGT+++ L +AF+ YG+++ V+++R TGRS+G
Sbjct: 28 LSVFQTLRFMS-----SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRG 82
Query: 396 FGFVXXXXXXXXXXXXQVMDGQCLDG 473
FGFV Q +DGQ LDG
Sbjct: 83 FGFVTFGASEDASSAIQALDGQDLDG 108
>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera] gi|147833478|emb|CAN75185.1| hypothetical
protein VITISV_001912 [Vitis vinifera]
gi|298205231|emb|CBI17290.3| unnamed protein product
[Vitis vinifera]
Length = 152
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
S++L+IGGLSYGT+++ LK AFS++GD++ V+ +R TGRS+GFGFV
Sbjct: 39 SAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSAL 98
Query: 444 QVMDGQCLDG 473
MDGQ L+G
Sbjct: 99 SAMDGQELNG 108
>ref|XP_006365467.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum tuberosum]
Length = 145
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
SSRL++GGLS+GT+++ LK+AF+++GD++ +V+++R +GRS+GFGFV
Sbjct: 38 SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97
Query: 444 QVMDGQCLDG 473
MDGQ L G
Sbjct: 98 NAMDGQQLHG 107
>gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
Length = 135
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +3
Query: 204 ISKRINIVRSLTFLQQRKRFSSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTG 383
+S +N +R ++ SS+L++GGLSYG +++ L+ AF+ YGD++ V+ +R TG
Sbjct: 23 VSSMLNYIRCMS--------SSKLFVGGLSYGVDDQSLRDAFAGYGDVVEARVITDRDTG 74
Query: 384 RSKGFGFVXXXXXXXXXXXXQVMDGQCLDG 473
RS+GFGFV MDGQ L+G
Sbjct: 75 RSRGFGFVNFSSDESATSALSAMDGQDLNG 104
>gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like
protein [Solanum tuberosum]
Length = 150
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +3
Query: 264 SSRLYIGGLSYGTNEEVLKKAFSAYGDILGVEVVVNRQTGRSKGFGFVXXXXXXXXXXXX 443
SSRL++GGLS+GT+++ LK+AF+++GD++ +V+++R +GRS+GFGFV
Sbjct: 38 SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97
Query: 444 QVMDGQCLDG 473
MDGQ L G
Sbjct: 98 NAMDGQQLHG 107