BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00023613
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB38474.1| Mediator of RNA polymerase II transcription subun...    56   4e-06
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...    55   7e-06
ref|XP_006476288.1| PREDICTED: mediator of RNA polymerase II tra...    55   1e-05
ref|XP_006439221.1| hypothetical protein CICLE_v10022441mg [Citr...    55   1e-05
ref|XP_002299427.1| RNA polymerase II mediator complex family pr...    55   1e-05

>gb|EXB38474.1| Mediator of RNA polymerase II transcription subunit 10 [Morus
           notabilis]
          Length = 209

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = +2

Query: 218 DAISNLGSLKGHTQRALGILHQLHLTVSSFNTASQLTLLDRLNSL 352
           D   NL  +   TQ+ LG+LHQL+LTVSSFN ASQL LL RLNSL
Sbjct: 36  DPKQNLNQVINSTQKNLGLLHQLYLTVSSFNAASQLPLLQRLNSL 80


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +2

Query: 218 DAISNLGSLKGHTQRALGILHQLHLTVSSFNTASQLTLLDRLNSL 352
           D   NL ++    Q+ LG+LHQL+LTVSSFNTASQL LL RLN L
Sbjct: 32  DPKQNLNNVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGL 76


>ref|XP_006476288.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           10b-like isoform X1 [Citrus sinensis]
           gi|568844841|ref|XP_006476289.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 10b-like isoform
           X2 [Citrus sinensis]
          Length = 186

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +2

Query: 218 DAISNLGSLKGHTQRALGILHQLHLTVSSFNTASQLTLLDRLNSL 352
           D   NL  +    Q+ LG+LHQL+LTVSSFN ASQL LL RLNSL
Sbjct: 31  DPKQNLNQVINSVQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSL 75


>ref|XP_006439221.1| hypothetical protein CICLE_v10022441mg [Citrus clementina]
           gi|557541483|gb|ESR52461.1| hypothetical protein
           CICLE_v10022441mg [Citrus clementina]
          Length = 186

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +2

Query: 218 DAISNLGSLKGHTQRALGILHQLHLTVSSFNTASQLTLLDRLNSL 352
           D   NL  +    Q+ LG+LHQL+LTVSSFN ASQL LL RLNSL
Sbjct: 31  DPKQNLNQVINSVQKTLGLLHQLYLTVSSFNAASQLPLLQRLNSL 75


>ref|XP_002299427.1| RNA polymerase II mediator complex family protein [Populus
           trichocarpa] gi|222846685|gb|EEE84232.1| RNA polymerase
           II mediator complex family protein [Populus trichocarpa]
          Length = 190

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +2

Query: 218 DAISNLGSLKGHTQRALGILHQLHLTVSSFNTASQLTLLDRLNSL 352
           D   NL  +    Q+ LG+LHQL+LTVSSFNTASQL LL RLN L
Sbjct: 35  DPKQNLNQVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGL 79