BLASTX nr result
ID: Ephedra27_contig00023552
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023552
(601 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77750.1| unknown [Picea sitchensis] 100 4e-19
gb|AEM36356.1| At1g59453 [Arabidopsis thaliana] 59 1e-06
dbj|BAG68922.1| transcription factor [Arabidopsis thaliana] 58 2e-06
dbj|BAG68920.1| transcription factor [Arabidopsis thaliana] 58 2e-06
gb|AAF97311.1|AC007843_14 Hypothetical protein [Arabidopsis thal... 57 5e-06
gb|AAM19849.1| At1g17450/F1L3.20 [Arabidopsis thaliana] gi|27363... 57 5e-06
ref|NP_001185022.1| B-block binding subunit of TFIIIC [Arabidops... 57 5e-06
ref|NP_173188.5| B-block binding subunit of TFIIIC [Arabidopsis ... 57 5e-06
ref|NP_176150.1| uncharacterized protein [Arabidopsis thaliana] ... 56 9e-06
ref|NP_176158.1| B-block binding subunit of TFIIIC [Arabidopsis ... 56 9e-06
>gb|ADE77750.1| unknown [Picea sitchensis]
Length = 411
Score = 100 bits (248), Expect = 4e-19
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = +2
Query: 5 VDSLTRIAEKILHSKESFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQY 184
+++L AE + S+ + +F A WFE DA+ K+ +EGLSL Q+ Q VG+D
Sbjct: 65 LEALVNFAEACVSSRIIAGDQPDIFEAKWFEKALDAIEKAGDEGLSLVQVAQSVGMDGND 124
Query: 185 IHIVDAIVEALQVFNYVKKVNAFDHVRVISQHKSARYFLNV 307
I DAIVEALQ FN+VKKVNAFDH+RVI+ KSA++FL++
Sbjct: 125 IEQADAIVEALQSFNHVKKVNAFDHIRVIAYSKSAKHFLHI 165
>gb|AEM36356.1| At1g59453 [Arabidopsis thaliana]
Length = 1731
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/85 (34%), Positives = 52/85 (61%)
Frame = +2
Query: 53 SFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFNY 232
S E ++LF FE + +A+ K+ ++GLS++++ L+ + +Q +I D IVE LQ F
Sbjct: 1441 SVNEQQSLFSPEVFEAVSNALHKAGDQGLSIEEVHCLISIPSQ--NICDCIVEVLQTFGV 1498
Query: 233 VKKVNAFDHVRVISQHKSARYFLNV 307
KVN +D+ R++ ++YFL +
Sbjct: 1499 ALKVNGYDNFRLVHSLYRSKYFLTL 1523
>dbj|BAG68922.1| transcription factor [Arabidopsis thaliana]
Length = 1695
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +2
Query: 53 SFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFNY 232
S EE ++LF FE + +A+ K+ ++GLS++++ L+ + +Q D IVE LQ F
Sbjct: 1405 SAEEQQSLFSPEVFEAVSNALHKAGDQGLSIEEVHFLINIPSQ--ETCDCIVEVLQTFGV 1462
Query: 233 VKKVNAFDHVRVISQHKSARYFLNV 307
KVN +D+ R++ ++YFL +
Sbjct: 1463 ALKVNGYDNFRLVHSLYRSKYFLTL 1487
>dbj|BAG68920.1| transcription factor [Arabidopsis thaliana]
Length = 980
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +2
Query: 53 SFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFNY 232
S EE ++LF FE + +A+ K+ ++GLS++++ L+ + +Q D IVE LQ F
Sbjct: 690 SAEEQQSLFSPEVFEAVSNALHKAGDQGLSIEEVHFLINIPSQ--ETCDCIVEVLQTFGV 747
Query: 233 VKKVNAFDHVRVISQHKSARYFLNV 307
KVN +D+ R++ ++YFL +
Sbjct: 748 ALKVNGYDNFRLVHSLYRSKYFLTL 772
>gb|AAF97311.1|AC007843_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1808
Score = 56.6 bits (135), Expect = 5e-06
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +2
Query: 50 ESFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFN 229
ES +E +LF FE + +A+ K+ ++GLS++++ L+ + +Q D IV+ LQ F
Sbjct: 1531 ESTDEEVSLFSPRVFETVSNALQKAGDQGLSIEEVHSLIDIPSQ--ETCDCIVDVLQTFG 1588
Query: 230 YVKKVNAFDHVRVISQHKSARYFLNV 307
KVN +++ RV+ ++YFL +
Sbjct: 1589 VALKVNGYNNFRVVHSFYRSKYFLTL 1614
>gb|AAM19849.1| At1g17450/F1L3.20 [Arabidopsis thaliana] gi|27363432|gb|AAO11635.1|
At1g17450/F1L3.20 [Arabidopsis thaliana]
Length = 609
Score = 56.6 bits (135), Expect = 5e-06
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +2
Query: 50 ESFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFN 229
ES +E +LF FE + +A+ K+ ++GLS++++ L+ + +Q D IV+ LQ F
Sbjct: 319 ESTDEEVSLFSPRVFETVSNALQKAGDQGLSIEEVHSLIDIPSQ--ETCDCIVDVLQTFG 376
Query: 230 YVKKVNAFDHVRVISQHKSARYFLNV 307
KVN +++ RV+ ++YFL +
Sbjct: 377 VALKVNGYNNFRVVHSFYRSKYFLTL 402
>ref|NP_001185022.1| B-block binding subunit of TFIIIC [Arabidopsis thaliana]
gi|332191469|gb|AEE29590.1| B-block binding subunit of
TFIIIC [Arabidopsis thaliana]
Length = 1844
Score = 56.6 bits (135), Expect = 5e-06
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +2
Query: 50 ESFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFN 229
ES +E +LF FE + +A+ K+ ++GLS++++ L+ + +Q D IV+ LQ F
Sbjct: 1554 ESTDEEVSLFSPRVFETVSNALQKAGDQGLSIEEVHSLIDIPSQ--ETCDCIVDVLQTFG 1611
Query: 230 YVKKVNAFDHVRVISQHKSARYFLNV 307
KVN +++ RV+ ++YFL +
Sbjct: 1612 VALKVNGYNNFRVVHSFYRSKYFLTL 1637
>ref|NP_173188.5| B-block binding subunit of TFIIIC [Arabidopsis thaliana]
gi|332191468|gb|AEE29589.1| B-block binding subunit of
TFIIIC [Arabidopsis thaliana]
Length = 1753
Score = 56.6 bits (135), Expect = 5e-06
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +2
Query: 50 ESFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFN 229
ES +E +LF FE + +A+ K+ ++GLS++++ L+ + +Q D IV+ LQ F
Sbjct: 1487 ESTDEEVSLFSPRVFETVSNALQKAGDQGLSIEEVHSLIDIPSQ--ETCDCIVDVLQTFG 1544
Query: 230 YVKKVNAFDHVRVISQHKSARYFLNV 307
KVN +++ RV+ ++YFL +
Sbjct: 1545 VALKVNGYNNFRVVHSFYRSKYFLTL 1570
>ref|NP_176150.1| uncharacterized protein [Arabidopsis thaliana]
gi|22330314|ref|NP_683445.1| uncharacterized protein
[Arabidopsis thaliana]
gi|14475942|gb|AAK62789.1|AC027036_10 hypothetical
protein [Arabidopsis thaliana]
gi|332195440|gb|AEE33561.1| uncharacterized protein
AT1G58766 [Arabidopsis thaliana]
gi|332195448|gb|AEE33569.1| uncharacterized protein
AT1G59077 [Arabidopsis thaliana]
Length = 665
Score = 55.8 bits (133), Expect = 9e-06
Identities = 28/85 (32%), Positives = 50/85 (58%)
Frame = +2
Query: 53 SFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFNY 232
S EE ++L FE + +A+ K+ ++GLS++++ L+ + +Q D IVE LQ F
Sbjct: 377 SAEEQQSLISPEVFEAVSNALHKAGDQGLSIEEVHFLINIPSQ--ETCDCIVEVLQTFGV 434
Query: 233 VKKVNAFDHVRVISQHKSARYFLNV 307
KVN +D+ R++ ++YFL +
Sbjct: 435 ALKVNGYDNFRLVHSLYRSKYFLTL 459
>ref|NP_176158.1| B-block binding subunit of TFIIIC [Arabidopsis thaliana]
gi|14475936|gb|AAK62783.1|AC027036_4 hypothetical protein
[Arabidopsis thaliana] gi|332195457|gb|AEE33578.1|
B-block binding subunit of TFIIIC [Arabidopsis thaliana]
Length = 1729
Score = 55.8 bits (133), Expect = 9e-06
Identities = 28/85 (32%), Positives = 50/85 (58%)
Frame = +2
Query: 53 SFEEMETLFHANWFEIIFDAVAKSSEEGLSLDQILQLVGLDTQYIHIVDAIVEALQVFNY 232
S EE ++L FE + +A+ K+ ++GLS++++ L+ + +Q D IVE LQ F
Sbjct: 1441 SAEEQQSLISPEVFEAVSNALHKAGDQGLSIEEVHFLINIPSQ--ETCDCIVEVLQTFGV 1498
Query: 233 VKKVNAFDHVRVISQHKSARYFLNV 307
KVN +D+ R++ ++YFL +
Sbjct: 1499 ALKVNGYDNFRLVHSLYRSKYFLTL 1523