BLASTX nr result

ID: Ephedra27_contig00023522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00023522
         (1075 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001776817.1| predicted protein [Physcomitrella patens] gi...   134   6e-29
ref|XP_001766677.1| predicted protein [Physcomitrella patens] gi...   133   1e-28
ref|XP_005643667.1| hypothetical protein COCSUDRAFT_59606 [Cocco...    74   1e-10

>ref|XP_001776817.1| predicted protein [Physcomitrella patens]
           gi|162671821|gb|EDQ58367.1| predicted protein
           [Physcomitrella patens]
          Length = 623

 Score =  134 bits (337), Expect = 6e-29
 Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
 Frame = -3

Query: 596 GVCLFIVTL-VASAPSFLTWSPGLNSALYLTNKVIPGKISVKSVSLGWTKNVIIEDVILQ 420
           GV L + T+  A+APS  +   GL + + + +  IPG +SV   SLGW K + +E V L+
Sbjct: 137 GVLLVLATIFAAAAPSMFSSPRGLKTIMSMASHTIPGTVSVARASLGWRKPLYLEGVTLK 196

Query: 419 GTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMIDLQEEKETGLSRLSLAIMPXX 240
           G DG TVL IP +ET+++LWS+V G AGFGD  + +P++DLQ++  +G   L+LA+ P  
Sbjct: 197 GIDGETVLYIPKIETRASLWSIVSGKAGFGDSTVTAPVVDLQQDPASGQPYLALALTPLA 256

Query: 239 XXXXXXXXXXXXXVHF----PTVHVGMLLNIKAPNGDLKVLNGNILLPQDLAAVTGKKIH 72
                               P   V +  ++KAPNG ++++ G ++LPQD A   G  I 
Sbjct: 257 KLQENKPNLNNSKKRSVAIEPPRDVALAASVKAPNGGMEIVKGKVILPQDAATAIGPSIF 316

Query: 71  IDILLGHSAKQ 39
           +D+  G  A +
Sbjct: 317 LDVAAGRFATE 327


>ref|XP_001766677.1| predicted protein [Physcomitrella patens]
           gi|162682109|gb|EDQ68530.1| predicted protein
           [Physcomitrella patens]
          Length = 490

 Score =  133 bits (335), Expect = 1e-28
 Identities = 72/191 (37%), Positives = 105/191 (54%)
 Frame = -3

Query: 611 LKFTFGVCLFIVTLVASAPSFLTWSPGLNSALYLTNKVIPGKISVKSVSLGWTKNVIIED 432
           +KF  GV       VA AP  ++   GL++ L++ N  IPG +SV+SVSLGW K + IE 
Sbjct: 1   MKFVGGVVAITGAAVAGAPYLISRPFGLHTLLFVINSSIPGTLSVESVSLGWNKPIHIEG 60

Query: 431 VILQGTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMIDLQEEKETGLSRLSLAI 252
           VIL+G +   VL IP  +T + LW+LV+G AG GD ++  P +D++ + E+G     LA+
Sbjct: 61  VILKGPNSSAVLLIPEYKTNAHLWTLVVGRAGLGDAVVLQPTLDMRNDPESGHPYYDLAV 120

Query: 251 MPXXXXXXXXXXXXXXXVHFPTVHVGMLLNIKAPNGDLKVLNGNILLPQDLAAVTGKKIH 72
                               P+  V     ++AP G L+VLNG ++LP DLAAV G  ++
Sbjct: 121 TSVDKLNVSNPYVKKKFKVLPSEVVSWTAKMRAPEGGLEVLNGKVILPGDLAAVLGAHLY 180

Query: 71  IDILLGHSAKQ 39
            DI  G  A +
Sbjct: 181 FDIAFGSYATE 191


>ref|XP_005643667.1| hypothetical protein COCSUDRAFT_59606 [Coccomyxa subellipsoidea
           C-169] gi|384245630|gb|EIE19123.1| hypothetical protein
           COCSUDRAFT_59606 [Coccomyxa subellipsoidea C-169]
          Length = 548

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
 Frame = -3

Query: 614 LLKFTFGVCLFIVTLVASAPSFLTWSPGLNSALYLTNKVIPGKISVKSVSLGWTKNVIIE 435
           + K   G+ L +   V + PS L+   GL SAL + N+ +PG ++VK  SLGW K V IE
Sbjct: 1   MAKVAGGLALVLAAFVVALPSILSTKAGLRSALAVANRFVPGTVAVKQASLGWRKPVNIE 60

Query: 434 DV---ILQGTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMID--LQEEKETGLS 270
            V    L    G  V+ +PS+ + ++LW +  G     + +++SP +D  L EE E  L 
Sbjct: 61  HVEWGDLSEAGGSAVVEVPSIRSSASLWEIARGRE--YEVVVSSPRVDGSLTEEGELRLQ 118

Query: 269 RLS 261
           +++
Sbjct: 119 QVA 121


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