BLASTX nr result

ID: Ephedra27_contig00023474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00023474
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002994738.1| hypothetical protein SELMODRAFT_432639 [Sela...    77   5e-12
ref|XP_001764918.1| predicted protein [Physcomitrella patens] gi...    64   4e-08
ref|XP_001752297.1| predicted protein [Physcomitrella patens] gi...    60   6e-07
ref|XP_001785784.1| predicted protein [Physcomitrella patens] gi...    60   6e-07
ref|XP_001787135.1| predicted protein [Physcomitrella patens] gi...    60   6e-07

>ref|XP_002994738.1| hypothetical protein SELMODRAFT_432639 [Selaginella moellendorffii]
           gi|300136996|gb|EFJ04195.1| hypothetical protein
           SELMODRAFT_432639 [Selaginella moellendorffii]
          Length = 481

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = +3

Query: 3   SGLFTCFLGEPAKREWQSKQAEMKGLNIAGTLGPLASMHGIGPCFSTCEYMSEGKEGPEL 182
           + LFT F+  P K  W      +K L +AGT+GPLASMH +GPCFS  E +    +GPEL
Sbjct: 395 TALFTVFVDGPTKCSW----GNVKNLKLAGTIGPLASMHYVGPCFSVAEAL---LDGPEL 447

Query: 183 CVHLTFATPVYTRDFMHGFATSAIDLLLSECA 278
            +   + TP+Y+R  +    +S++DLL S  A
Sbjct: 448 SLTFVYTTPMYSRSQLQDLVSSSLDLLKSAVA 479


>ref|XP_001764918.1| predicted protein [Physcomitrella patens]
           gi|162683954|gb|EDQ70360.1| predicted protein
           [Physcomitrella patens]
          Length = 476

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +3

Query: 3   SGLFTCFLGEPAKREWQSKQAEMKGLNIAGTLGPLASMHGIGPCFSTCEYMSEGKEGPEL 182
           + LF+ F+ E  K +W+  Q     L +    GP  SMHG+GPCF+  E +   +EG +L
Sbjct: 390 TSLFSLFVDEAPKLQWRGYQ----NLQVGVVAGPFPSMHGVGPCFAISETL---REGNDL 442

Query: 183 CVHLTFATPVYTRDFMHGFATSAIDLL 263
            +   +A PV+TR  M  +  +A++LL
Sbjct: 443 SISFIYAQPVFTRSQMSAYCAAAVELL 469


>ref|XP_001752297.1| predicted protein [Physcomitrella patens]
           gi|162696692|gb|EDQ83030.1| predicted protein
           [Physcomitrella patens]
          Length = 329

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = +3

Query: 3   SGLFTCFLGEPAKREWQSKQAEMKGLNIAGTLGPLASMHGIGPCFSTCEYMSEGKEGPEL 182
           + LF+ F+ E    +W +       L +A   GP  SMH IGPCF+ C+ M +G    ++
Sbjct: 176 TALFSLFVDETPFNQWTNTDK----LQVAAVCGPFPSMHRIGPCFAVCDTMLDGN---DI 228

Query: 183 CVHLTFATPVYTRDFMHGFATSAIDLL 263
            + L + T VY+R  M  FA S ++LL
Sbjct: 229 SISLMYPTQVYSRAQMKAFAASVMNLL 255


>ref|XP_001785784.1| predicted protein [Physcomitrella patens]
           gi|162662574|gb|EDQ49410.1| predicted protein
           [Physcomitrella patens]
          Length = 482

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 32/87 (36%), Positives = 47/87 (54%)
 Frame = +3

Query: 3   SGLFTCFLGEPAKREWQSKQAEMKGLNIAGTLGPLASMHGIGPCFSTCEYMSEGKEGPEL 182
           + LF+ F+ E   + ++    E + L +A   GP  SMHG+GPCF+  E   EG     L
Sbjct: 396 TALFSLFVDEAPLQLYK----EYQRLQVAAVAGPFPSMHGVGPCFAVSEAFCEGN---NL 448

Query: 183 CVHLTFATPVYTRDFMHGFATSAIDLL 263
            + L +  PVYTR  M  +  SA++LL
Sbjct: 449 SISLIYPQPVYTRSQMQAYGASAMELL 475


>ref|XP_001787135.1| predicted protein [Physcomitrella patens]
           gi|162659616|gb|EDQ48051.1| predicted protein
           [Physcomitrella patens]
          Length = 129

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = +3

Query: 3   SGLFTCFLGEPAKREWQSKQAEMKGLNIAGTLGPLASMHGIGPCFSTCEYMSEGKEGPEL 182
           + LF+ F+ E    +W +       L +A   GP  SMH IGPCF+ C+ M +G    ++
Sbjct: 42  TALFSLFVDETPFNQWTNTDK----LQVAAVCGPFPSMHRIGPCFAVCDTMLDGN---DI 94

Query: 183 CVHLTFATPVYTRDFMHGFATSAIDLL 263
            + L + T VY+R  M  FA S ++LL
Sbjct: 95  SISLMYPTQVYSRAQMKAFAASVMNLL 121


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