BLASTX nr result

ID: Ephedra27_contig00023418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00023418
         (627 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532712.1| PREDICTED: F-box protein SKIP14-like [Glycin...    84   3e-14
gb|EXB82413.1| hypothetical protein L484_027585 [Morus notabilis]      84   4e-14
ref|XP_003524160.2| PREDICTED: F-box protein SKIP14-like [Glycin...    83   6e-14
ref|XP_002514971.1| conserved hypothetical protein [Ricinus comm...    79   1e-12
gb|ESW30719.1| hypothetical protein PHAVU_002G176800g [Phaseolus...    78   2e-12
ref|XP_002315636.1| F-box family protein [Populus trichocarpa] g...    76   7e-12
ref|XP_006395604.1| hypothetical protein EUTSA_v100042620mg, par...    76   9e-12
ref|XP_002876943.1| F-box family protein [Arabidopsis lyrata sub...    76   9e-12
emb|CBI27542.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    75   2e-11
gb|AAM98151.1| expressed protein [Arabidopsis thaliana]                75   2e-11
gb|ADE77174.1| unknown [Picea sitchensis]                              74   3e-11
ref|NP_566787.1| F-box protein SKIP14 [Arabidopsis thaliana] gi|...    73   6e-11
ref|XP_004310032.1| PREDICTED: F-box protein SKIP14-like [Fragar...    73   6e-11
emb|CBI40086.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    72   1e-10
ref|XP_006291109.1| hypothetical protein CARUB_v10017220mg [Caps...    72   2e-10
ref|XP_004504484.1| PREDICTED: F-box protein SKIP14-like [Cicer ...    70   6e-10
ref|XP_004237240.1| PREDICTED: F-box protein SKIP14-like [Solanu...    70   6e-10
emb|CAN83962.1| hypothetical protein VITISV_011588 [Vitis vinifera]    70   6e-10

>ref|XP_003532712.1| PREDICTED: F-box protein SKIP14-like [Glycine max]
          Length = 451

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 34/79 (43%), Positives = 51/79 (64%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           DQ I++E+C  CQ  +++Y+ P E+C G E   +  + C LC+P C +C   I ++EYEE
Sbjct: 354 DQAIDIEVCPRCQNLRLVYDCPAESCQGVEHTTQVCRACTLCIPRCSQCGRCINDSEYEE 413

Query: 182 TFSLEIMCSICYHQTNRCS 238
           TF LE++CS C  Q  +CS
Sbjct: 414 TFCLELLCSSCSKQLVKCS 432


>gb|EXB82413.1| hypothetical protein L484_027585 [Morus notabilis]
          Length = 498

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 33/77 (42%), Positives = 51/77 (66%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E C  CQ  +++Y+ P E C G++  I+  + C LC+P C KC   I +NEYEE
Sbjct: 392 DRYIDIETCPRCQNHRLVYDCPAETCQGKDHAIQLCRACTLCIPRCVKCGRCITDNEYEE 451

Query: 182 TFSLEIMCSICYHQTNR 232
           TF LE++C IC+H+  +
Sbjct: 452 TFCLELLCFICWHEVEK 468


>ref|XP_003524160.2| PREDICTED: F-box protein SKIP14-like [Glycine max]
          Length = 463

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 33/79 (41%), Positives = 52/79 (65%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D++I++E+C  CQ  +++Y+ P E+C G E   +  + C LC+P C +C   I ++EYEE
Sbjct: 366 DRVIDIEVCPLCQNLRLVYDCPAESCQGVEHTTQICRACTLCIPRCSQCGCCINDSEYEE 425

Query: 182 TFSLEIMCSICYHQTNRCS 238
           TF LE++CS C  Q  +CS
Sbjct: 426 TFCLELLCSSCSKQLVKCS 444


>ref|XP_002514971.1| conserved hypothetical protein [Ricinus communis]
           gi|223546022|gb|EEF47525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E+C  CQ  +++Y+ P E C  +E + +  + C LC+  C +C   I ++EYEE
Sbjct: 379 DRTIDIEMCPRCQNLRLVYDCPAEGCQQKEHSSQACRGCTLCIARCSQCGCCINDSEYEE 438

Query: 182 TFSLEIMCSICYHQTNRCSR---------CLHGNHVGSCS 274
           TF LE++CS CY Q  +C                HV SCS
Sbjct: 439 TFCLELLCSDCYKQLLKCQEKQVNKITPPKSLARHVSSCS 478


>gb|ESW30719.1| hypothetical protein PHAVU_002G176800g [Phaseolus vulgaris]
          Length = 459

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 31/79 (39%), Positives = 50/79 (63%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ +++E+C  CQ  +++Y+ P E+C G     +  + C LC+P C +C   I ++EYEE
Sbjct: 365 DRAMDIEVCPRCQNLRLVYDCPAESCQGMGHTPQMCRACTLCIPRCSQCGHCINDSEYEE 424

Query: 182 TFSLEIMCSICYHQTNRCS 238
           TF LE++CS C  Q  +CS
Sbjct: 425 TFCLELLCSSCSKQLVKCS 443


>ref|XP_002315636.1| F-box family protein [Populus trichocarpa]
           gi|222864676|gb|EEF01807.1| F-box family protein
           [Populus trichocarpa]
          Length = 449

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 32/78 (41%), Positives = 50/78 (64%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E+C  CQ  ++IY+ P E C G+E   +  + C LC+  C +C   I ++EYEE
Sbjct: 372 DRAIDIEMCPRCQNLRLIYDCPVEGCQGKEHPSQACRACSLCIARCVQCGRCINDSEYEE 431

Query: 182 TFSLEIMCSICYHQTNRC 235
           TF LE++CS C+ Q  +C
Sbjct: 432 TFCLELLCSDCWKQLLKC 449


>ref|XP_006395604.1| hypothetical protein EUTSA_v100042620mg, partial [Eutrema
           salsugineum] gi|557092243|gb|ESQ32890.1| hypothetical
           protein EUTSA_v100042620mg, partial [Eutrema
           salsugineum]
          Length = 120

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 29/71 (40%), Positives = 48/71 (67%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+++++E+C  CQ ++++Y+ P E+C G+E   E+ + C LC+  C  C   I ++EYEE
Sbjct: 41  DRVLDIEMCPKCQNSRLVYDCPAEDCKGKEEGSEECRACSLCIQRCFHCGRCINDSEYEE 100

Query: 182 TFSLEIMCSIC 214
           TF LE +CS C
Sbjct: 101 TFCLEFLCSDC 111


>ref|XP_002876943.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322781|gb|EFH53202.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 27/71 (38%), Positives = 49/71 (69%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ +++E+C  CQ ++++Y+ P E+C G++   E+ + C LC+  C+ C   I ++EYEE
Sbjct: 372 DRALDIEMCPKCQNSRLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCINDSEYEE 431

Query: 182 TFSLEIMCSIC 214
           TF LE +C++C
Sbjct: 432 TFCLEFLCAVC 442


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E C  CQ  +++Y+ P + C  +E   +  + C LC+  C +C   I + EYEE
Sbjct: 313 DRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEE 372

Query: 182 TFSLEIMCSICYHQTNRCSR----CLHG 253
           TF LE +CS C+ Q  +C      CLHG
Sbjct: 373 TFCLEWLCSDCFKQQPQCQETSNLCLHG 400


>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E C  CQ  +++Y+ P + C  +E   +  + C LC+  C +C   I + EYEE
Sbjct: 371 DRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEE 430

Query: 182 TFSLEIMCSICYHQTNRCSR----CLHG 253
           TF LE +CS C+ Q  +C      CLHG
Sbjct: 431 TFCLEWLCSDCFKQQPQCQETSNLCLHG 458


>gb|AAM98151.1| expressed protein [Arabidopsis thaliana]
          Length = 453

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 29/75 (38%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ +++E+C  CQ  K++Y+ P E+C GE+   E+ + C LC+  C+ C   I + EYEE
Sbjct: 374 DRALDIEMCPKCQNFKLVYDCPAEDCKGEKKGSEECRACSLCIQRCYHCGRCIIDTEYEE 433

Query: 182 TFSLEIMCSICYHQT 226
            F LE++C++C   T
Sbjct: 434 MFCLELLCAVCSKPT 448


>gb|ADE77174.1| unknown [Picea sitchensis]
          Length = 189

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVN-IEDFQDCILCLPVCHKCQSRIRNNEYE 178
           D+ I+VE+C  C+  +++Y+ P E C  ++ + ++  + CI C+  C +C   I +NE+E
Sbjct: 67  DRSIDVEVCPKCENARLVYDCPRERCQKKKGHKLQQCRGCIFCIARCEECGRCIDDNEFE 126

Query: 179 ETFSLEIMCSICYHQTNRCSRC 244
           ETF L+++CS C+ Q  +C  C
Sbjct: 127 ETFCLDLLCSACWLQLPKCLEC 148


>ref|NP_566787.1| F-box protein SKIP14 [Arabidopsis thaliana]
           gi|75274194|sp|Q9LU91.1|SKI14_ARATH RecName: Full=F-box
           protein SKIP14; AltName: Full=SKP1-interacting partner
           14 gi|9279605|dbj|BAB01063.1| unnamed protein product
           [Arabidopsis thaliana] gi|16604358|gb|AAL24185.1|
           AT3g26000/MPE11_15 [Arabidopsis thaliana]
           gi|54606854|gb|AAV34775.1| At3g26000 [Arabidopsis
           thaliana] gi|332643579|gb|AEE77100.1| F-box protein
           SKIP14 [Arabidopsis thaliana]
          Length = 453

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 28/75 (37%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ +++E+C  CQ  K++Y+ P E+C G++   E+ + C LC+  C+ C   I + EYEE
Sbjct: 374 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEE 433

Query: 182 TFSLEIMCSICYHQT 226
            F LE++C++C   T
Sbjct: 434 MFCLELLCAVCSKPT 448


>ref|XP_004310032.1| PREDICTED: F-box protein SKIP14-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 31/74 (41%), Positives = 47/74 (63%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D  I++EIC  CQ  +++Y+ P E C G+E   +  + C LC+  C +C   I ++EYEE
Sbjct: 426 DSDIDIEICPRCQNLRLVYDCPAEACQGKEHPTQLCRACTLCIGRCAQCGRCINDSEYEE 485

Query: 182 TFSLEIMCSICYHQ 223
           TF LE++CS C+ Q
Sbjct: 486 TFCLELLCSDCWKQ 499


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 27/78 (34%), Positives = 48/78 (61%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E+C  CQ+ +++Y+ P E+C G+  + +  + C LC+  C  C   I + +YEE
Sbjct: 374 DRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCGRCINDCDYEE 433

Query: 182 TFSLEIMCSICYHQTNRC 235
           TF L+++C  C+ Q   C
Sbjct: 434 TFCLDLLCLDCFKQLLNC 451


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 27/78 (34%), Positives = 48/78 (61%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I++E+C  CQ+ +++Y+ P E+C G+  + +  + C LC+  C  C   I + +YEE
Sbjct: 374 DRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCGRCINDCDYEE 433

Query: 182 TFSLEIMCSICYHQTNRC 235
           TF L+++C  C+ Q   C
Sbjct: 434 TFCLDLLCLDCFKQLLNC 451


>ref|XP_006291109.1| hypothetical protein CARUB_v10017220mg [Capsella rubella]
           gi|565466460|ref|XP_006291110.1| hypothetical protein
           CARUB_v10017220mg [Capsella rubella]
           gi|482559816|gb|EOA24007.1| hypothetical protein
           CARUB_v10017220mg [Capsella rubella]
           gi|482559817|gb|EOA24008.1| hypothetical protein
           CARUB_v10017220mg [Capsella rubella]
          Length = 455

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 25/68 (36%), Positives = 47/68 (69%)
 Frame = +2

Query: 11  IEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEETFS 190
           +++E+C  C  ++++Y+ P E+C G++   E+ + C LC+  C++C   I ++EYEETF 
Sbjct: 379 LDIEMCPKCLNSRLVYDCPAEDCKGKKEGSEECRACSLCIQRCYQCGRCINDSEYEETFC 438

Query: 191 LEIMCSIC 214
           LE +C++C
Sbjct: 439 LEFLCAVC 446


>ref|XP_004504484.1| PREDICTED: F-box protein SKIP14-like [Cicer arietinum]
          Length = 503

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDF-QDCILCLPVCHKCQSRIRNNEYE 178
           D+ I++E+C  CQ  +++Y+ P E C G         + C LC+P C +C   I ++EYE
Sbjct: 406 DRAIDIEVCPRCQNLRLVYDCPAEGCQGVVGRTTQVCRACTLCIPRCSQCGRCINDSEYE 465

Query: 179 ETFSLEIMCSICYHQTNRC 235
           ETF LE++C  C     +C
Sbjct: 466 ETFCLELLCCSCSQYLVKC 484


>ref|XP_004237240.1| PREDICTED: F-box protein SKIP14-like [Solanum lycopersicum]
          Length = 480

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +2

Query: 11  IEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEETFS 190
           I+V++C  C++ +++Y+ P E C  ++  I++ + C LC+  C +C   I N EY ETF 
Sbjct: 398 IDVQLCPMCKKVRLVYDCPAEGCQVKDEAIKECRACSLCILRCSECGRCINNTEYVETFC 457

Query: 191 LEIMCSICYHQTNRC 235
           LE++CS C  Q   C
Sbjct: 458 LELLCSDCSKQPLEC 472


>emb|CAN83962.1| hypothetical protein VITISV_011588 [Vitis vinifera]
          Length = 1150

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 24/75 (32%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   DQLIEVEICSTCQRTKIIYNFPGENCHGEEVNIEDFQDCILCLPVCHKCQSRIRNNEYEE 181
           D+ I +E+C  C + +++Y+ P E+C G+  + + ++ C LC+  C  C   I + +YEE
Sbjct: 572 DRAINIEVCPRCPKVRLVYDSPSESCQGKHQSAQLWRACTLCIARCFHCGCCINDCDYEE 631

Query: 182 TFSLEIMCSICYHQT 226
           TF L+++C +C++ +
Sbjct: 632 TFCLKLLCLVCFNSS 646


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