BLASTX nr result
ID: Ephedra27_contig00023389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023389
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953130.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 100 3e-19
ref|XP_004953129.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 100 3e-19
ref|XP_002454186.1| hypothetical protein SORBIDRAFT_04g026340 [S... 99 4e-19
ref|XP_004953131.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 99 6e-19
gb|EMT18664.1| E3 ubiquitin-protein ligase PRT1 [Aegilops tauschii] 98 1e-18
gb|EMS53997.1| E3 ubiquitin-protein ligase PRT1 [Triticum urartu] 98 1e-18
gb|AFW72385.1| putative RING zinc finger domain superfamily prot... 98 1e-18
gb|AFW72384.1| putative RING zinc finger domain superfamily prot... 98 1e-18
ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 97 3e-18
ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 97 3e-18
dbj|BAJ99683.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 5e-18
ref|XP_006647532.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 95 8e-18
ref|NP_001047461.1| Os02g0621500 [Oryza sativa Japonica Group] g... 94 2e-17
gb|EEC73618.1| hypothetical protein OsI_08115 [Oryza sativa Indi... 94 2e-17
ref|XP_006297663.1| hypothetical protein CARUB_v10013687mg, part... 91 1e-16
gb|AAM64697.1| PRT1 [Arabidopsis thaliana] 91 2e-16
ref|NP_189124.1| E3 ubiquitin-protein ligase PRT1 [Arabidopsis t... 91 2e-16
ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arab... 91 2e-16
ref|XP_006360357.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 89 5e-16
ref|XP_006418693.1| hypothetical protein EUTSA_v100025931mg [Eut... 89 5e-16
>ref|XP_004953130.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform X2
[Setaria italica]
Length = 413
Score = 99.8 bits (247), Expect = 3e-19
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CG YPI GKRYKC+DC+E IGFDLC AC++ L LPGRFNQQHT DHR+ +N
Sbjct: 279 VGCDSCGEYPIHGKRYKCKDCTELIGFDLCGACYESSLKLPGRFNQQHTPDHRMELDNSA 338
Query: 183 AINLTKEQYLYL 218
+ + L +
Sbjct: 339 LLGRVHQDLLMM 350
>ref|XP_004953129.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform X1
[Setaria italica]
Length = 425
Score = 99.8 bits (247), Expect = 3e-19
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CG YPI GKRYKC+DC+E IGFDLC AC++ L LPGRFNQQHT DHR+ +N
Sbjct: 291 VGCDSCGEYPIHGKRYKCKDCTELIGFDLCGACYESSLKLPGRFNQQHTPDHRMELDNSA 350
Query: 183 AINLTKEQYLYL 218
+ + L +
Sbjct: 351 LLGRVHQDLLMM 362
>ref|XP_002454186.1| hypothetical protein SORBIDRAFT_04g026340 [Sorghum bicolor]
gi|241934017|gb|EES07162.1| hypothetical protein
SORBIDRAFT_04g026340 [Sorghum bicolor]
Length = 246
Score = 99.4 bits (246), Expect = 4e-19
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEEN 176
VGCD CGVYPI GKRYKC+DC+E IGFDLCEAC+ LPGRFNQ+HT DHR+ +N
Sbjct: 104 VGCDSCGVYPIRGKRYKCQDCTELIGFDLCEACYNSSSKLPGRFNQRHTPDHRMEVDN 161
>ref|XP_004953131.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform X3
[Setaria italica]
Length = 394
Score = 99.0 bits (245), Expect = 6e-19
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEEN 176
VGCD CG YPI GKRYKC+DC+E IGFDLC AC++ L LPGRFNQQHT DHR+ +N
Sbjct: 280 VGCDSCGEYPIHGKRYKCKDCTELIGFDLCGACYESSLKLPGRFNQQHTPDHRMELDN 337
>gb|EMT18664.1| E3 ubiquitin-protein ligase PRT1 [Aegilops tauschii]
Length = 366
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CGVYPI GKRYKC+DC+EAIGFDLC C+ LPGRFNQQHT DHR+ +N +
Sbjct: 259 VGCDSCGVYPIRGKRYKCKDCTEAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDNSS 318
>gb|EMS53997.1| E3 ubiquitin-protein ligase PRT1 [Triticum urartu]
Length = 333
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CGVYPI GKRYKC+DC+EAIGFDLC C+ LPGRFNQQHT DHR+ +N +
Sbjct: 226 VGCDSCGVYPIRGKRYKCKDCTEAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDNSS 285
>gb|AFW72385.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CGVYPI GKRYKC+DC+E IGFDLCEAC+ LPGRFNQ+HT +HR+ +N
Sbjct: 280 VGCDSCGVYPIRGKRYKCQDCTELIGFDLCEACYNSSSKLPGRFNQRHTPNHRMEVDNSA 339
Query: 183 AIN 191
++
Sbjct: 340 LVH 342
>gb|AFW72384.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 451
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CGVYPI GKRYKC+DC+E IGFDLCEAC+ LPGRFNQ+HT +HR+ +N
Sbjct: 274 VGCDSCGVYPIRGKRYKCQDCTELIGFDLCEACYNSSSKLPGRFNQRHTPNHRMEVDNSA 333
Query: 183 AIN 191
++
Sbjct: 334 LVH 336
>ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 2
[Brachypodium distachyon]
Length = 385
Score = 96.7 bits (239), Expect = 3e-18
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEEN 176
VGCD CGVYPI GKRYKC+DC+E +GFDLC+ C+ LPGRFNQQHT DHR+ +N
Sbjct: 280 VGCDSCGVYPIQGKRYKCKDCTELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDN 337
>ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 1
[Brachypodium distachyon]
Length = 391
Score = 96.7 bits (239), Expect = 3e-18
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEEN 176
VGCD CGVYPI GKRYKC+DC+E +GFDLC+ C+ LPGRFNQQHT DHR+ +N
Sbjct: 286 VGCDSCGVYPIQGKRYKCKDCTELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDN 343
>dbj|BAJ99683.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 95.9 bits (237), Expect = 5e-18
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEEN 176
VGCD CGVYPI G+RYKC+DC+EAIGFDLC C+ LPGRFNQQHT DHR+ +N
Sbjct: 311 VGCDSCGVYPIRGQRYKCKDCTEAIGFDLCGECYDSTSKLPGRFNQQHTPDHRMELDN 368
>ref|XP_006647532.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Oryza
brachyantha]
Length = 397
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/92 (50%), Positives = 55/92 (59%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CGVYPI GKRY+C+DC+E IGFDLCE C+ LPGRFNQ HT DHR+ +N
Sbjct: 287 VGCDSCGVYPIRGKRYRCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRMELDN-- 344
Query: 183 AINLTKEQYLYLSKDLPYLMRMQEVDVESTNG 278
S L +MR+Q + E G
Sbjct: 345 ------------SALLHRIMRLQGIHEEGPGG 364
>ref|NP_001047461.1| Os02g0621500 [Oryza sativa Japonica Group]
gi|47847766|dbj|BAD21543.1| putative PRT1 protein [Oryza
sativa Japonica Group] gi|113536992|dbj|BAF09375.1|
Os02g0621500 [Oryza sativa Japonica Group]
gi|215767949|dbj|BAH00178.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222623262|gb|EEE57394.1| hypothetical protein
OsJ_07567 [Oryza sativa Japonica Group]
Length = 408
Score = 94.0 bits (232), Expect = 2e-17
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CG+YPI GKRYKC+DC+E IGFDLCE C+ LPGRFNQ HT DHR+ ++
Sbjct: 297 VGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRMELDHSA 356
Query: 183 AIN 191
N
Sbjct: 357 LFN 359
>gb|EEC73618.1| hypothetical protein OsI_08115 [Oryza sativa Indica Group]
Length = 408
Score = 94.0 bits (232), Expect = 2e-17
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRLTEENGN 182
VGCD CG+YPI GKRYKC+DC+E IGFDLCE C+ LPGRFNQ HT DHR+ ++
Sbjct: 297 VGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTESKLPGRFNQHHTPDHRMELDHSA 356
Query: 183 AIN 191
N
Sbjct: 357 LFN 359
>ref|XP_006297663.1| hypothetical protein CARUB_v10013687mg, partial [Capsella rubella]
gi|482566372|gb|EOA30561.1| hypothetical protein
CARUB_v10013687mg, partial [Capsella rubella]
Length = 451
Score = 91.3 bits (225), Expect = 1e-16
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +3
Query: 6 GCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRL 164
GCD CGVYPI+G RY+C+DC E IG+DLC+ C++ +PGRFNQQHT DHRL
Sbjct: 347 GCDSCGVYPIIGDRYRCKDCKEEIGYDLCKECYESPSKVPGRFNQQHTPDHRL 399
>gb|AAM64697.1| PRT1 [Arabidopsis thaliana]
Length = 401
Score = 90.5 bits (223), Expect = 2e-16
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +3
Query: 6 GCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRL 164
GCD CGVYPI+G RY+C+DC E IG+DLC+ C++ +PGRFNQQHT DHRL
Sbjct: 301 GCDSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRL 353
>ref|NP_189124.1| E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]
gi|62900696|sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3
ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis
1 protein gi|3319884|emb|CAA11891.1| PRT1 [Arabidopsis
thaliana] gi|3319886|emb|CAA11892.1| PRT1 [Arabidopsis
thaliana] gi|11994662|dbj|BAB02890.1| PRT1 protein
[Arabidopsis thaliana] gi|19424005|gb|AAL87280.1|
putative PRT1 protein [Arabidopsis thaliana]
gi|21280981|gb|AAM45125.1| putative PRT1 protein
[Arabidopsis thaliana] gi|332643427|gb|AEE76948.1| E3
ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]
Length = 410
Score = 90.5 bits (223), Expect = 2e-16
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +3
Query: 6 GCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRL 164
GCD CGVYPI+G RY+C+DC E IG+DLC+ C++ +PGRFNQQHT DHRL
Sbjct: 310 GCDSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRL 362
>ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp.
lyrata] gi|297329402|gb|EFH59821.1| hypothetical protein
ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]
Length = 417
Score = 90.5 bits (223), Expect = 2e-16
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +3
Query: 6 GCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRL 164
GCD CGVYPI+G RY+C+DC E IG+DLC+ C++ +PGRFNQQHT DHRL
Sbjct: 316 GCDSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRL 368
>ref|XP_006360357.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Solanum
tuberosum]
Length = 442
Score = 89.4 bits (220), Expect = 5e-16
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 3 VGCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHR 161
VGCD CG+ PIVG+RYKC+DC E IGFDLCE C++ LPGRFNQQHT +H+
Sbjct: 307 VGCDYCGMCPIVGERYKCKDCKEKIGFDLCEGCYKSSSKLPGRFNQQHTPEHQ 359
>ref|XP_006418693.1| hypothetical protein EUTSA_v100025931mg [Eutrema salsugineum]
gi|557096621|gb|ESQ37129.1| hypothetical protein
EUTSA_v100025931mg [Eutrema salsugineum]
Length = 349
Score = 89.4 bits (220), Expect = 5e-16
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +3
Query: 6 GCDDCGVYPIVGKRYKCRDCSEAIGFDLCEACHQKGLVLPGRFNQQHTADHRL 164
GCD CGVYPI+G RY+C+DC E IG+DLC+ C++ +PGRFNQQHT +HRL
Sbjct: 240 GCDSCGVYPIIGDRYRCKDCKEEIGYDLCKECYETPSKVPGRFNQQHTPEHRL 292