BLASTX nr result
ID: Ephedra27_contig00023314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023314
(540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW67745.1| alpha tubulin4 [Zea mays] 63 4e-08
ref|XP_738179.1| hypothetical protein [Plasmodium chabaudi chaba... 62 9e-08
gb|AFW67748.1| alpha tubulin4 [Zea mays] 62 9e-08
gb|ABX25950.1| alpha-tubulin, partial [Planomonas micra] 62 1e-07
gb|AAB61233.1| alpha-tubulin [Spirostomum sp.] 60 3e-07
gb|ABO61408.1| alpha tubulin [Pyramimonas sp. CCMP2094] 60 3e-07
gb|ABO61419.1| alpha tubulin [Prasinophyceae sp. RS-11] 60 3e-07
gb|ABP96885.1| alpha-tubulin [Protocruzia contrax] 60 3e-07
ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241... 60 4e-07
ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Caps... 60 4e-07
ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Caps... 60 4e-07
gb|EMJ06388.1| hypothetical protein PRUPE_ppa005642mg [Prunus pe... 60 4e-07
gb|EMJ05545.1| hypothetical protein PRUPE_ppa005649mg [Prunus pe... 60 4e-07
ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alph... 60 4e-07
ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucum... 60 4e-07
gb|ABB16994.1| unknown [Solanum tuberosum] 60 4e-07
ref|NP_001275472.1| alpha-tubulin-like protein [Solanum tuberosu... 60 4e-07
ref|XP_002525416.1| tubulin alpha chain, putative [Ricinus commu... 60 4e-07
gb|AEO92378.1| alpha-tubulin [Chilodonella uncinata] gi|34743929... 59 1e-06
gb|ACZ63319.1| alpha-tubulin [Chilodonella uncinata] 59 1e-06
>gb|AFW67745.1| alpha tubulin4 [Zea mays]
Length = 111
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSK 349
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ TSK
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTSK 111
>ref|XP_738179.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514180|emb|CAH74820.1| hypothetical protein
PC000359.00.0 [Plasmodium chabaudi chabaudi]
Length = 131
Score = 62.0 bits (149), Expect = 9e-08
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMPVLYILVS 304
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T C+ + L
Sbjct: 67 FVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIDVCLDRIRKLAD 126
Query: 303 N 301
N
Sbjct: 127 N 127
>gb|AFW67748.1| alpha tubulin4 [Zea mays]
Length = 364
Score = 62.0 bits (149), Expect = 9e-08
Identities = 37/90 (41%), Positives = 49/90 (54%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMPVLYILVS 304
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T ++ + +
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE------IVDLCLD 120
Query: 303 NV*KSQDKATIVS*FICVALGREIVDLCSS 214
+ K D T + F+ L R + + SS
Sbjct: 121 RIRKLADNCTGLQGFLVFNLNRLVSQVISS 150
>gb|ABX25950.1| alpha-tubulin, partial [Planomonas micra]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
YVD PTA DEV T TYRQLFH E+LISGKED A N+A G+ T
Sbjct: 38 YVDLEPTAVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYT 80
>gb|AAB61233.1| alpha-tubulin [Spirostomum sp.]
Length = 394
Score = 60.5 bits (145), Expect = 3e-07
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMP 325
++D PT DEV T TYRQLFH E+LISGKED A NFA G+ T++ + +P
Sbjct: 43 FLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTNRKGNRRPVP 95
>gb|ABO61408.1| alpha tubulin [Pyramimonas sp. CCMP2094]
Length = 398
Score = 60.5 bits (145), Expect = 3e-07
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMPVLYILVS 304
++D PT DEV T TYRQLFH E+LISGKED A NFA G+ T ++ + +
Sbjct: 52 FLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE------IVDLCLD 105
Query: 303 NV*KSQDKATIVS*FIC 253
V K D T + F+C
Sbjct: 106 RVRKLADNCTGLQGFLC 122
>gb|ABO61419.1| alpha tubulin [Prasinophyceae sp. RS-11]
Length = 386
Score = 60.5 bits (145), Expect = 3e-07
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMPVLYILVS 304
++D PT DEV T TYRQLFH E+LISGKED A NFA G+ T ++ + +
Sbjct: 47 FLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE------IVDLCLD 100
Query: 303 NV*KSQDKATIVS*FIC 253
V K D T + F+C
Sbjct: 101 RVRKLADNCTGLQGFLC 117
>gb|ABP96885.1| alpha-tubulin [Protocruzia contrax]
Length = 357
Score = 60.5 bits (145), Expect = 3e-07
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNTSKSSHSCCMPVLYILVS 304
YVD PT DEV T TYRQL+H E++ISGKED A N+A G+ T ++ +++
Sbjct: 21 YVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKE------IVDLVLD 74
Query: 303 NV*KSQDKATIVS*FIC 253
+ K D T + F+C
Sbjct: 75 RIRKLADNCTGLQGFMC 91
>ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241179|ref|NP_197479.1|
tubulin alpha-5 [Arabidopsis thaliana]
gi|297808045|ref|XP_002871906.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|297812159|ref|XP_002873963.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|567175789|ref|XP_006400538.1| hypothetical protein
EUTSA_v10013521mg [Eutrema salsugineum]
gi|567175793|ref|XP_006400540.1| hypothetical protein
EUTSA_v10013523mg [Eutrema salsugineum]
gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName:
Full=Tubulin alpha-3 chain
gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName:
Full=Tubulin alpha-5 chain
gi|13605805|gb|AAK32888.1|AF367301_1
AT5g19770/T29J13_190 [Arabidopsis thaliana]
gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis
thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin
[Arabidopsis thaliana] gi|14532776|gb|AAK64169.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|23397154|gb|AAN31860.1| putative tubulin alpha-5
chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
[Arabidopsis thaliana] gi|24899739|gb|AAN65084.1|
unknown protein [Arabidopsis thaliana]
gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1|
tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata]
gi|332005364|gb|AED92747.1| tubulin alpha-3 [Arabidopsis
thaliana] gi|332005365|gb|AED92748.1| tubulin alpha-5
[Arabidopsis thaliana] gi|557101628|gb|ESQ41991.1|
hypothetical protein EUTSA_v10013521mg [Eutrema
salsugineum] gi|557101630|gb|ESQ41993.1| hypothetical
protein EUTSA_v10013523mg [Eutrema salsugineum]
Length = 450
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Capsella rubella]
gi|482555501|gb|EOA19693.1| hypothetical protein
CARUB_v10003470mg [Capsella rubella]
Length = 450
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Capsella rubella]
gi|482555370|gb|EOA19562.1| hypothetical protein
CARUB_v10002583mg [Capsella rubella]
Length = 450
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>gb|EMJ06388.1| hypothetical protein PRUPE_ppa005642mg [Prunus persica]
Length = 450
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>gb|EMJ05545.1| hypothetical protein PRUPE_ppa005649mg [Prunus persica]
Length = 449
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>ref|XP_004170946.1| PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3 chain-like [Cucumis
sativus]
Length = 447
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>ref|XP_004141134.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus]
Length = 449
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>gb|ABB16994.1| unknown [Solanum tuberosum]
Length = 467
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 85 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 127
>ref|NP_001275472.1| alpha-tubulin-like protein [Solanum tuberosum]
gi|76573359|gb|ABA46784.1| alpha-tubulin-like protein
[Solanum tuberosum]
Length = 237
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>ref|XP_002525416.1| tubulin alpha chain, putative [Ricinus communis]
gi|223535229|gb|EEF36906.1| tubulin alpha chain,
putative [Ricinus communis]
Length = 449
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
+VD PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 67 FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
>gb|AEO92378.1| alpha-tubulin [Chilodonella uncinata] gi|347439294|gb|AEO92379.1|
alpha-tubulin [Chilodonella uncinata]
gi|347439296|gb|AEO92380.1| alpha-tubulin [Chilodonella
uncinata] gi|347439298|gb|AEO92381.1| alpha-tubulin
[Chilodonella uncinata]
Length = 340
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
++D PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 23 FLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 65
>gb|ACZ63319.1| alpha-tubulin [Chilodonella uncinata]
Length = 373
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 483 YVDFAPTASDEV*TRTYRQLFHKEKLISGKEDGAKNFAYGNNT 355
++D PT DEV T TYRQLFH E+LISGKED A NFA G+ T
Sbjct: 38 FLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 80