BLASTX nr result
ID: Ephedra27_contig00023258
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023258
(521 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put... 107 2e-21
ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM... 103 3e-20
gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein ... 102 4e-20
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis... 99 6e-19
emb|CAA66406.1| orf12 [Arabidopsis thaliana] 99 6e-19
dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana] 99 6e-19
ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [A... 98 1e-18
gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays] g... 98 1e-18
ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea ma... 98 1e-18
gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus... 98 1e-18
ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM... 97 2e-18
ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citr... 97 2e-18
gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japo... 96 4e-18
ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group] g... 96 4e-18
ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Popu... 96 5e-18
ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arab... 96 5e-18
ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM... 96 6e-18
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 96 6e-18
ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [S... 95 1e-17
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago... 94 1e-17
>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis] gi|223547811|gb|EEF49303.1| DNA cross-link
repair protein pso2/snm1, putative [Ricinus communis]
Length = 493
Score = 107 bits (267), Expect = 2e-21
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL++PISK N+T+YGVPYSEHSSF ELKEFV+FL+P KIIPTVN GNPT R MQSHF+
Sbjct: 429 LDLIRPISKGNVTIYGVPYSEHSSFTELKEFVEFLKPDKIIPTVNVGNPTNREKMQSHFR 488
Query: 181 QWL 189
+WL
Sbjct: 489 EWL 491
>ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM1-like [Solanum
tuberosum]
Length = 413
Score = 103 bits (256), Expect = 3e-20
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
L+L+KP SK NIT+YGVPYSEHS+FIEL+EFVQFLRP+KIIPTVN GN R MQS+FQ
Sbjct: 349 LNLIKPTSKGNITIYGVPYSEHSNFIELQEFVQFLRPEKIIPTVNVGNAVNRGKMQSYFQ 408
Query: 181 QWL 189
QWL
Sbjct: 409 QWL 411
>gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein isoform 1
[Theobroma cacao]
Length = 461
Score = 102 bits (255), Expect = 4e-20
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL++PIS+ N+T+YGVPYSEHSSF EL+EFVQFLRP KIIPTVN GN T R MQS+F+
Sbjct: 397 LDLIRPISRGNVTIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVGNATNRDKMQSYFR 456
Query: 181 QWL 189
QWL
Sbjct: 457 QWL 459
>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein
[Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
thaliana] gi|28827378|gb|AAO50533.1| unknown protein
[Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S+ IT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS F+
Sbjct: 420 LDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCFR 479
Query: 181 QWL 189
+WL
Sbjct: 480 EWL 482
>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S+ IT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS F+
Sbjct: 420 LDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCFR 479
Query: 181 QWL 189
+WL
Sbjct: 480 EWL 482
>dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana]
Length = 484
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S+ IT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVNNGN R MQS F+
Sbjct: 420 LDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCFR 479
Query: 181 QWL 189
+WL
Sbjct: 480 EWL 482
>ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [Amborella trichopoda]
gi|548847154|gb|ERN06358.1| hypothetical protein
AMTR_s00016p00244350 [Amborella trichopoda]
Length = 479
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP SK NIT+YGVPYSEHSSF EL++FVQFLRP+KIIPTVN G R M SHF+
Sbjct: 415 LDLIKPNSKGNITIYGVPYSEHSSFTELRDFVQFLRPEKIIPTVNVGKAAARDQMHSHFR 474
Query: 181 QWL 189
+WL
Sbjct: 475 EWL 477
>gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein
ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/63 (68%), Positives = 54/63 (85%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S +N+T+YGVPYSEHSSF EL++FV FL+P+KIIPTVN GN T R MQ+HF+
Sbjct: 440 LDLIKPSSNANVTIYGVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQAHFR 499
Query: 181 QWL 189
+WL
Sbjct: 500 EWL 502
>ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/63 (68%), Positives = 54/63 (85%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S +N+T+YGVPYSEHSSF EL++FV FL+P+KIIPTVN GN T R MQ+HF+
Sbjct: 215 LDLIKPSSNANVTIYGVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQAHFR 274
Query: 181 QWL 189
+WL
Sbjct: 275 EWL 277
>gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus vulgaris]
Length = 164
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
L+L+KP++K NIT+YGVPYSEHSSF EL++FVQFLRP KIIPTVN GN R MQS+F+
Sbjct: 100 LELIKPVTKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFR 159
Query: 181 QWL 189
WL
Sbjct: 160 DWL 162
>ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Citrus sinensis]
Length = 464
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL++P+S+ NIT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVN N R MQS F+
Sbjct: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFR 454
Query: 181 QWLS 192
+WLS
Sbjct: 455 EWLS 458
>ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citrus clementina]
gi|557549489|gb|ESR60118.1| hypothetical protein
CICLE_v10015161mg [Citrus clementina]
Length = 464
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL++P+S+ NIT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVN N R MQS F+
Sbjct: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFR 454
Query: 181 QWLS 192
+WLS
Sbjct: 455 EWLS 458
>gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S+ IT+YGVPYSEHSSF EL+EFV FLRP+K+IPTVN GN R MQ+HF+
Sbjct: 416 LDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQAHFR 475
Query: 181 QWL 189
+WL
Sbjct: 476 EWL 478
>ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza
sativa Japonica Group] gi|113564261|dbj|BAF14604.1|
Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza
sativa Indica Group]
Length = 481
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP S+ IT+YGVPYSEHSSF EL+EFV FLRP+K+IPTVN GN R MQ+HF+
Sbjct: 416 LDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQAHFR 475
Query: 181 QWL 189
+WL
Sbjct: 476 EWL 478
>ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Populus trichocarpa]
gi|550324134|gb|EEE99378.2| hypothetical protein
POPTR_0014s13570g [Populus trichocarpa]
Length = 477
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL++P ++ NIT+YGVPYSEHSSF EL++FV+FL+P KIIPTVN GNP R MQS+F+
Sbjct: 413 LDLIRPSTRGNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQSYFR 472
Query: 181 QWL 189
+WL
Sbjct: 473 EWL 475
>ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata] gi|297321169|gb|EFH51590.1| hypothetical protein
ARALYDRAFT_484438 [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP K IT+YGVPYSEHSSF EL+EFVQFLRP KIIPTVNN N R MQS F+
Sbjct: 419 LDLIKPTCKGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNANAGTREKMQSCFR 478
Query: 181 QWL 189
+WL
Sbjct: 479 EWL 481
>ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Glycine max]
Length = 503
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
L+L+KP+SK NIT+YGVPYSEHSSF EL++FVQ LRP KIIPTVN GN R MQS+F+
Sbjct: 439 LELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFR 498
Query: 181 QWL 189
WL
Sbjct: 499 DWL 501
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Glycine max]
Length = 505
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
L+L+KP+SK NIT+YGVPYSEHSSF EL++FVQ LRP KIIPTVN GN R MQS+F+
Sbjct: 441 LELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFR 500
Query: 181 QWL 189
WL
Sbjct: 501 DWL 503
>ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
gi|241938929|gb|EES12074.1| hypothetical protein
SORBIDRAFT_06g014970 [Sorghum bicolor]
Length = 496
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
LDL+KP ++T+YGVPYSEHSSF EL++FV FLRP+K+IPTVN GN T R MQ+HF+
Sbjct: 431 LDLIKPSCNGSVTIYGVPYSEHSSFTELRDFVMFLRPQKVIPTVNVGNATSRDKMQAHFR 490
Query: 181 QWL 189
+WL
Sbjct: 491 EWL 493
>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair
metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair
protein SNM1 [Medicago truncatula]
Length = 511
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +1
Query: 1 LDLLKPISKSNITVYGVPYSEHSSFIELKEFVQFLRPKKIIPTVNNGNPTIRATMQSHFQ 180
L L+KP+S NIT YGVPYSEHSSF EL++FVQFLRP KIIPTVN GN R MQS+F+
Sbjct: 447 LALIKPVSNGNITTYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFR 506
Query: 181 QWL 189
WL
Sbjct: 507 DWL 509