BLASTX nr result
ID: Ephedra27_contig00023060
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00023060
(441 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002986181.1| hypothetical protein SELMODRAFT_234972 [Sela... 77 2e-12
ref|XP_002984991.1| hypothetical protein SELMODRAFT_234671 [Sela... 77 2e-12
ref|XP_004135522.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 76 5e-12
gb|EMS66185.1| Cleavage and polyadenylation specificity factor s... 75 9e-12
ref|XP_006650916.1| PREDICTED: cleavage and polyadenylation spec... 74 2e-11
gb|EMJ25304.1| hypothetical protein PRUPE_ppa015633mg [Prunus pe... 74 2e-11
ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation spec... 74 2e-11
ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation spec... 74 3e-11
ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation spec... 73 3e-11
ref|XP_003531594.1| PREDICTED: cleavage and polyadenylation spec... 73 4e-11
gb|EMT17383.1| Cleavage and polyadenylation specificity factor s... 72 6e-11
gb|EMJ28649.1| hypothetical protein PRUPE_ppa002876mg [Prunus pe... 72 6e-11
ref|NP_001146407.1| uncharacterized protein LOC100279987 [Zea ma... 72 6e-11
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s... 72 8e-11
dbj|BAJ86772.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
dbj|BAJ85804.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
dbj|BAJ89790.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation spec... 72 1e-10
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec... 72 1e-10
gb|EOX98110.1| Cleavage and polyadenylation specificity factor 7... 72 1e-10
>ref|XP_002986181.1| hypothetical protein SELMODRAFT_234972 [Selaginella moellendorffii]
gi|300146040|gb|EFJ12712.1| hypothetical protein
SELMODRAFT_234972 [Selaginella moellendorffii]
Length = 684
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +2
Query: 59 KAKDDFKIMKSLLISLFGDVK--EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQN 232
K ++D +++SLL SLFGDVK EE KL++++DG ATVD++ V+C DD+LK+RI++
Sbjct: 609 KIEEDLTVVQSLLTSLFGDVKVDEEGKKLVISVDGVAATVDYTSRSVECDDDNLKERIKS 668
Query: 233 ALNRMQTAIRPIRMSS 280
AL+RM + P+ + S
Sbjct: 669 ALHRMHNVLHPLAIES 684
>ref|XP_002984991.1| hypothetical protein SELMODRAFT_234671 [Selaginella moellendorffii]
gi|302825687|ref|XP_002994439.1| hypothetical protein
SELMODRAFT_236963 [Selaginella moellendorffii]
gi|300137630|gb|EFJ04498.1| hypothetical protein
SELMODRAFT_236963 [Selaginella moellendorffii]
gi|300147201|gb|EFJ13866.1| hypothetical protein
SELMODRAFT_234671 [Selaginella moellendorffii]
Length = 677
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +2
Query: 59 KAKDDFKIMKSLLISLFGDVK--EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQN 232
K ++D +++SLL SLFGDVK EE KL++++DG ATVD++ V+C DD+LK+RI++
Sbjct: 602 KIEEDLTVVQSLLTSLFGDVKVDEEGKKLVISVDGVAATVDYTSRSVECDDDNLKERIKS 661
Query: 233 ALNRMQTAIRPIRMSS 280
AL+RM + P+ + S
Sbjct: 662 ALHRMHNVLHPLAIES 677
>ref|XP_004135522.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-I-like [Cucumis sativus]
Length = 481
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/98 (41%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESES---SENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVAT 169
N N E P+ +ESE+ E K K++ +LL+SLFGDVK E+GKL++ +DG +A
Sbjct: 384 NINREVPKV-IVESEAVKTEEENVKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAE 442
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
VD EV+ ++++LK+R++ A R+Q A+ PI +SS+
Sbjct: 443 VDKQSGEVESENEALKERVKTAFQRIQCAVNPIPLSSS 480
>gb|EMS66185.1| Cleavage and polyadenylation specificity factor subunit 3-I [Triticum
urartu]
Length = 875
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/97 (40%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+A +E+ ++ E K K++ +L++SLFGDVK E+GKL++++DG VA +
Sbjct: 779 NIGREGPKAVPIEAAAKTEEEMEKVVQKVVYALMVSLFGDVKVAEEGKLVISVDGDVAHL 838
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C++ +LK+RI A R+Q A+RPI +S++
Sbjct: 839 DGRSGDVECENAALKERISTAFRRIQGAVRPIPLSAS 875
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+A +E+ ++ E K K++ +L++SLFGDVK E+GKL++++DG VA +
Sbjct: 609 NIGREGPKAVPIEAAAKTEEEMEKVVQKVVYALMVSLFGDVKVAEEGKLVISVDGDVAHL 668
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAI 259
D +V+C++ +LK+RI A R+Q A+
Sbjct: 669 DGRSGDVECENAALKERISTAFRRIQGAL 697
>ref|XP_006650916.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Oryza brachyantha]
Length = 632
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/97 (39%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E + K++ +L++SLFGDVK E+GKL++++DG+VA +
Sbjct: 536 NIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHL 595
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C++ SLK+RI+ A R+Q A+RPI ++S+
Sbjct: 596 DGRSGDVECENASLKERIKTAFRRIQGAVRPIPLASS 632
>gb|EMJ25304.1| hypothetical protein PRUPE_ppa015633mg [Prunus persica]
Length = 692
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/97 (40%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESE---SSENKAKDDFKIMKSLLISLFGDVKE-EDGKLIVTMDGKVAT 169
N N E P+ +ESE + E K K++ +LL+SLFGDVK E+GKL++T+DG VA
Sbjct: 596 NINREVPKV-VVESEDVKTEEENGKKVEKVIHALLVSLFGDVKPGENGKLVITVDGNVAQ 654
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 280
+D +V+ + + LK++++ A+ R+Q+A++PI +S+
Sbjct: 655 LDKQSGDVESEHEGLKEKVKAAIRRIQSAVKPIPLSA 691
>ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Brachypodium distachyon]
Length = 768
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E K K++ +L++SLFGDVK E GK ++++DG VA +
Sbjct: 672 NIGREGPKVVPVEEAEKTQEETEKVARKVVYALMVSLFGDVKVAEGGKFVISVDGDVAHL 731
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D S +V+C++ +LK+RI+ A R+Q A+RPI +SS+
Sbjct: 732 DGSSGDVECENAALKERIKTAFRRIQGAVRPIPLSSS 768
>ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Fragaria vesca subsp. vesca]
Length = 693
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/92 (39%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +2
Query: 2 NFNPESPRA--KALESESSENKAKDDFKIMKSLLISLFGDVKE-EDGKLIVTMDGKVATV 172
N N E PR +A ++ + E + +++ +LL+SLFGDVK E+GKL++++DG VA +
Sbjct: 597 NINREVPRVVIEAEDTTAEEENGRRTERVIHALLVSLFGDVKPGENGKLVISVDGNVAQL 656
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPI 268
D +V+ +++ LK+R++ A R+Q+A+RPI
Sbjct: 657 DKQSGDVESENEGLKERVKTAFRRIQSAVRPI 688
>ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Brachypodium distachyon]
Length = 690
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/97 (39%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ + K K++ +L++SLF DVK E+GKL++++DG VA +
Sbjct: 594 NIGREGPKVVPVEEAEKTQDETEKVARKVVYALMVSLFADVKVAEEGKLVISVDGDVAHL 653
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D S +V+C++ +LK+RI+ A R+Q A+RPI +SS+
Sbjct: 654 DGSSGDVECENAALKERIKTAFRRIQGAVRPIPLSSS 690
>ref|XP_003531594.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Glycine max]
Length = 688
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/98 (41%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Frame = +2
Query: 2 NFNPESPRAKALESE----SSENKAKDDFKIMKSLLISLFGDVKE-EDGKLIVTMDGKVA 166
N N + P+ A ES+ ENK K + K+M +LL+SLFGDVK E+GKLI+ +DG VA
Sbjct: 592 NINRDVPKIMA-ESDVIKIEEENKKKAE-KVMHALLVSLFGDVKAGENGKLIINIDGNVA 649
Query: 167 TVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 280
++ EV+ +++ LK+R++ A R+Q++++PI +S+
Sbjct: 650 VLNKESGEVESENEGLKERVRAAFQRIQSSVKPIPLSA 687
>gb|EMT17383.1| Cleavage and polyadenylation specificity factor subunit 3 [Aegilops
tauschii]
Length = 720
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E K K++ SL++SLFGDVK E+GKL++T+DG VA +
Sbjct: 624 NIGREGPKVVPIEEAVKTEEETEKVARKVVYSLMVSLFGDVKVAEEGKLVITVDGDVAHL 683
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+ ++ LK+RI+ A R+Q A+RPI +S++
Sbjct: 684 DGRSGDVESENAGLKERIKTAFRRIQGAVRPIPLSAS 720
>gb|EMJ28649.1| hypothetical protein PRUPE_ppa002876mg [Prunus persica]
Length = 625
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/97 (39%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESE---SSENKAKDDFKIMKSLLISLFGDVKE-EDGKLIVTMDGKVAT 169
N N E P+ +ESE + E K K++ +LL+SLFGDVK E+GKL++++DG +A
Sbjct: 529 NINREVPKV-VVESEDVKTEEENGKKVEKVIHALLVSLFGDVKPGENGKLVISVDGNLAQ 587
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 280
+D +V+ +++ LK+R++ A R+Q+A++PI +S+
Sbjct: 588 LDKQSGDVESENEGLKERVKAAFRRIQSAVKPIPLSA 624
>ref|NP_001146407.1| uncharacterized protein LOC100279987 [Zea mays]
gi|219887045|gb|ACL53897.1| unknown [Zea mays]
gi|414873991|tpg|DAA52548.1| TPA: hypothetical protein
ZEAMMB73_264007 [Zea mays]
Length = 697
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E K K++ +L+ SLFGDVK E+GK ++++DG VA +
Sbjct: 601 NIGREGPKVVPVEEAVKTKEETEKAALKVVYALMTSLFGDVKVAEEGKFVISVDGNVAHL 660
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C++ +LK+RI+ A R+Q A+RPI +S++
Sbjct: 661 DGRSGDVECENATLKERIKTAFRRIQGAVRPIPLSAS 697
>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
notabilis]
Length = 693
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/97 (36%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRA--KALESESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N N E P+ ++ ++++ E+ K K++ +LL+SLFGDVK +GK+++ +DG VA +
Sbjct: 597 NINREVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGNGKIMINVDGNVAQL 656
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+ +++ LK+R++ A R+Q+A++PI +SS+
Sbjct: 657 DKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSSS 693
>dbj|BAJ86772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E + K++ +L++SLFGDVK E+GKLI+T+DG A +
Sbjct: 608 NIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSLFGDVKVAEEGKLIITVDGDAAHL 667
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 668 DGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>dbj|BAJ85804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E + K++ +L++SLFGDVK E+GKLI+T+DG A +
Sbjct: 608 NIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSLFGDVKVAEEGKLIITVDGDAAHL 667
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 668 DGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>dbj|BAJ89790.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +2
Query: 2 NFNPESPRAKALES--ESSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVATV 172
N E P+ +E ++ E + K++ +L++SLFGDVK E+GKLI+T+DG A +
Sbjct: 608 NIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSLFGDVKVAEEGKLIITVDGDAAHL 667
Query: 173 DHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 668 DGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X2 [Citrus sinensis]
Length = 629
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/98 (38%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESE---SSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVAT 169
N N E P+ +ESE S E K K++ +LL+SLFGDV+ E+GKL++ +DG VA
Sbjct: 533 NINQEVPKL-VVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGENGKLVINVDGNVAH 591
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
+D +V+ +++ LK++++ A R+Q+A++PI +S++
Sbjct: 592 LDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLSAS 629
>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/98 (38%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESE---SSENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVAT 169
N N E P+ +ESE S E K K++ +LL+SLFGDV+ E+GKL++ +DG VA
Sbjct: 598 NINQEVPKL-VVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGENGKLVINVDGNVAH 656
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
+D +V+ +++ LK++++ A R+Q+A++PI +S++
Sbjct: 657 LDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLSAS 694
>gb|EOX98110.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
cacao]
Length = 694
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/98 (38%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 NFNPESPRAKALESES---SENKAKDDFKIMKSLLISLFGDVK-EEDGKLIVTMDGKVAT 169
N + E P+ +ESE+ E K K++ +LL+SLFGDVK E+GKL++++DG VA
Sbjct: 598 NISREIPKV-VVESEAVKMEEENGKKAEKVIHALLVSLFGDVKLGENGKLMISVDGNVAH 656
Query: 170 VDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 283
+D +V+ +++ LK+R++ A R+Q+A++PI +S++
Sbjct: 657 LDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSAS 694