BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022885
         (3495 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519957.1| ATP synthase CF1 alpha chain (chloroplast) [...   929   0.0  
ref|YP_002519780.1| ATP synthase CF1 alpha chain [Gnetum parvifo...   859   0.0  
dbj|BAN16882.1| ATP synthase subunit alpha (chloroplast) [Gnetum...   855   0.0  
ref|YP_001876579.1| ATP synthase CF1 alpha subunit [Welwitschia ...   850   0.0  
gb|AFM54193.1| AtpA (chloroplast) [Zamia furfuracea]                  813   0.0  
dbj|BAL03668.1| ATP synthase CF1 alpha chain (chloroplast) [Bowe...   812   0.0  
ref|YP_008474548.1| ATP synthase CF1 subunit alpha (chloroplast)...   810   0.0  
gb|AFM54192.1| AtpA (chloroplast) [Ceratozamia hildae]                810   0.0  
ref|NP_777397.1| ATP synthase CF1 alpha subunit [Anthoceros form...   806   0.0  
gb|AEX93512.1| ATP synthase alpha chain (chloroplast) [Echeandia...   806   0.0  
ref|YP_001312176.1| ATP synthase CF1 alpha chain [Cycas taitunge...   806   0.0  
gb|ABU85310.1| ATP synthase CF1 alpha subunit [Cycas micronesica]     805   0.0  
gb|AEX93545.1| ATP synthase alpha chain (chloroplast) [Liriope s...   805   0.0  
gb|AEX93513.1| ATP synthase alpha chain (chloroplast) [Hosta ven...   804   0.0  
gb|AEJ10077.1| ATP synthase CF1 alpha subunit [Hosta ventricosa]      804   0.0  
gb|AEX93550.1| ATP synthase alpha chain (chloroplast) [Androstep...   804   0.0  
ref|YP_004935651.1| atpA gene product (chloroplast) [Sesamum ind...   804   0.0  
ref|YP_004891431.1| ATP synthase CF1 alpha chain (chloroplast) [...   804   0.0  
ref|YP_007026124.1| ATP synthase CF1 alpha subunit (chloroplast)...   803   0.0  
gb|AEX93511.1| ATP synthase alpha chain (chloroplast) [Camassia ...   803   0.0  

>ref|YP_002519957.1| ATP synthase CF1 alpha chain (chloroplast) [Ephedra equisetina]
            gi|220983558|dbj|BAH11325.1| ATP synthase CF1 alpha chain
            (chloroplast) [Ephedra equisetina]
          Length = 507

 Score =  929 bits (2401), Expect = 0.0
 Identities = 489/507 (96%), Positives = 490/507 (96%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT
Sbjct: 1    MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLETNNVGVVLMGDGLTIKEG SVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG
Sbjct: 61   IGIALNLETNNVGVVLMGDGLTIKEGGSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
            PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP
Sbjct: 181  TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE
Sbjct: 241  YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            GLSVSRVGSAAQIKAMKQVAGKLK                SDLDKGTQDQLARGQRLREL
Sbjct: 361  GLSVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKGTQDQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQPQ+APLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK
Sbjct: 421  LKQPQAAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
            TLTEEAETMLREAIKEQIELFVLQLKK
Sbjct: 481  TLTEEAETMLREAIKEQIELFVLQLKK 507


>ref|YP_002519780.1| ATP synthase CF1 alpha chain [Gnetum parvifolium]
            gi|512721577|ref|YP_008082197.1| ATP synthase CF1 alpha
            chain (chloroplast) [Gnetum montanum]
            gi|190358175|sp|A6BM08.1|ATPA_GNEPA RecName: Full=ATP
            synthase subunit alpha, chloroplastic; AltName: Full=ATP
            synthase F1 sector subunit alpha; AltName: Full=F-ATPase
            subunit alpha gi|149941372|dbj|BAF64853.1| ATPase alpha
            subunit [Gnetum parvifolium] gi|220983523|dbj|BAH11291.1|
            ATP synthase CF1 alpha chain (chloroplast) [Gnetum
            parvifolium] gi|490345022|gb|AGL11042.1| ATP synthase CF1
            alpha chain (chloroplast) [Gnetum montanum]
          Length = 508

 Score =  859 bits (2219), Expect = 0.0
 Identities = 446/507 (87%), Positives = 468/507 (92%)
 Frame = +1

Query: 1861 VMITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDG 2040
            +MITIRPDEISS+IR+QIEQYNNE+QV+NMG VLQVGDGIARIHGL EVMAGELVEFED 
Sbjct: 1    MMITIRPDEISSIIREQIEQYNNEIQVVNMGTVLQVGDGIARIHGLYEVMAGELVEFEDS 60

Query: 2041 TIGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGR 2220
            T+GIALNLET NVGVVLMGDGLTIKEGS VK TGKIAQIPVSDAFLGRIV+ALAQPIDGR
Sbjct: 61   TVGIALNLETQNVGVVLMGDGLTIKEGSFVKTTGKIAQIPVSDAFLGRIVNALAQPIDGR 120

Query: 2221 GPISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 2400
            GPI ASE RLIESPAPGI+SRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV
Sbjct: 121  GPIPASEFRLIESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 180

Query: 2401 ATDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLA 2580
            ATDTILNQKGQNV+CVYVAIGQKASSVAQVV  LRERS++EYTIVV EPADSPATLQYLA
Sbjct: 181  ATDTILNQKGQNVVCVYVAIGQKASSVAQVVNMLRERSAMEYTIVVVEPADSPATLQYLA 240

Query: 2581 PYTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLL 2760
            PYTG ALAEYFMYKK+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLL
Sbjct: 241  PYTGTALAEYFMYKKKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 300

Query: 2761 ERAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 2940
            ERAAKLN+QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLS+DLFNAGIRPAIN
Sbjct: 301  ERAAKLNSQLGEGSITALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAIN 360

Query: 2941 VGLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLRE 3120
            VGLSVSRVGSAAQIKAMKQVAGKLK                SDLDKGTQDQLARGQRLRE
Sbjct: 361  VGLSVSRVGSAAQIKAMKQVAGKLKLELAQTAELEAFAQFASDLDKGTQDQLARGQRLRE 420

Query: 3121 LLKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTT 3300
             LKQPQS PL+VEEQIATIF GTNGYLDRF+++ VKKFLDQLREYLK  KPQFGEIIRTT
Sbjct: 421  SLKQPQSTPLTVEEQIATIFTGTNGYLDRFDIREVKKFLDQLREYLKKKKPQFGEIIRTT 480

Query: 3301 KTLTEEAETMLREAIKEQIELFVLQLK 3381
            K  TEEAE +LREAIKEQ ELFV+Q K
Sbjct: 481  KIFTEEAEALLREAIKEQTELFVVQQK 507


>dbj|BAN16882.1| ATP synthase subunit alpha (chloroplast) [Gnetum ula]
          Length = 508

 Score =  855 bits (2209), Expect = 0.0
 Identities = 443/507 (87%), Positives = 468/507 (92%)
 Frame = +1

Query: 1861 VMITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDG 2040
            +MITIRPDEISS+IR+QIEQYNNE+QV+NMG VLQVGDGIARIHGLCEVMAGELVEFED 
Sbjct: 1    MMITIRPDEISSIIREQIEQYNNEIQVVNMGTVLQVGDGIARIHGLCEVMAGELVEFEDS 60

Query: 2041 TIGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGR 2220
            T+GIALNLET NVGVVLMGDGLTIKEGS VK TGKIAQIPVSDAFLGRIV+ALAQPIDGR
Sbjct: 61   TVGIALNLETKNVGVVLMGDGLTIKEGSFVKTTGKIAQIPVSDAFLGRIVNALAQPIDGR 120

Query: 2221 GPISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 2400
            GPI ASE RLIESPAPGI+SRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV
Sbjct: 121  GPIPASEFRLIESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 180

Query: 2401 ATDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLA 2580
            ATDTILNQK QNV+CVYVAIGQKASSVAQVV TLR+RS++EYTIVV EPADSPATLQYLA
Sbjct: 181  ATDTILNQKDQNVVCVYVAIGQKASSVAQVVNTLRKRSAMEYTIVVVEPADSPATLQYLA 240

Query: 2581 PYTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLL 2760
            PYTG ALAEYFMYKK+HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLL
Sbjct: 241  PYTGTALAEYFMYKKKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 300

Query: 2761 ERAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 2940
            ERAAKLN+QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLS+DLFNAGIRPAIN
Sbjct: 301  ERAAKLNSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAIN 360

Query: 2941 VGLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLRE 3120
            VGLSVSRVGSAAQIKAMKQVAGKLK                SDLDKGTQDQLARG+RLRE
Sbjct: 361  VGLSVSRVGSAAQIKAMKQVAGKLKLELAQTAELEAFAQFASDLDKGTQDQLARGRRLRE 420

Query: 3121 LLKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTT 3300
             LKQPQS PL+VEEQIA IF GTNGYLDRF+++ VKKFLD+LREYLK  KPQFGEIIRTT
Sbjct: 421  SLKQPQSIPLTVEEQIAIIFTGTNGYLDRFDIREVKKFLDELREYLKKKKPQFGEIIRTT 480

Query: 3301 KTLTEEAETMLREAIKEQIELFVLQLK 3381
            K  TEEAE +LREAIKEQ ELFV+Q K
Sbjct: 481  KIFTEEAEALLREAIKEQTELFVVQHK 507


>ref|YP_001876579.1| ATP synthase CF1 alpha subunit [Welwitschia mirabilis]
            gi|254808123|sp|B2Y1W2.1|ATPA_WELMI RecName: Full=ATP
            synthase subunit alpha, chloroplastic; AltName: Full=ATP
            synthase F1 sector subunit alpha; AltName: Full=F-ATPase
            subunit alpha gi|163311634|gb|ABY26792.1| ATP synthase
            CF1 alpha subunit [Welwitschia mirabilis]
            gi|220983457|dbj|BAH11226.1| ATP synthase CF1 alpha chain
            (chloroplast) [Welwitschia mirabilis]
          Length = 507

 Score =  850 bits (2195), Expect = 0.0
 Identities = 441/506 (87%), Positives = 469/506 (92%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            MITIRPDEISS+IR+QIEQYN+EVQV+NMG VLQVGDGIARIHGL EVMAGELVEFEDGT
Sbjct: 1    MITIRPDEISSIIREQIEQYNSEVQVVNMGTVLQVGDGIARIHGLREVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE  NVGVVLMGDGLTIKEGSSVK TGKIAQIPVSDAFLGRIV+ALAQP+DGRG
Sbjct: 61   VGIALNLEAQNVGVVLMGDGLTIKEGSSVKTTGKIAQIPVSDAFLGRIVNALAQPVDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
            PISASE RLIESPAPGI+SRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  PISASEFRLIESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQNVICVYVAIGQKASS+AQ+VKTLRE  ++EYTIVV EPADSPATLQYLAP
Sbjct: 181  TDTIINQKGQNVICVYVAIGQKASSIAQIVKTLRECGAMEYTIVVVEPADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKLN+QLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLS+DLFNAGIRPAI+V
Sbjct: 301  RAAKLNSQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAIDV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            GLSVSRVGSAAQIKAMKQVAGKLK                SDLDKGT+D LARGQRLRE+
Sbjct: 361  GLSVSRVGSAAQIKAMKQVAGKLKLELAQIAELESFARFASDLDKGTRDNLARGQRLREM 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QS+PL+VEEQIATIF GTNGYLD+ EV+ VK FLDQLR+YLK +KPQFGEIIRTT+
Sbjct: 421  LKQSQSSPLAVEEQIATIFTGTNGYLDKIEVKQVKTFLDQLRKYLKKNKPQFGEIIRTTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLK 3381
            T TEEAE +L EAIKEQ ELFV+Q K
Sbjct: 481  TFTEEAEALLIEAIKEQTELFVIQQK 506


>gb|AFM54193.1| AtpA (chloroplast) [Zamia furfuracea]
          Length = 507

 Score =  813 bits (2100), Expect = 0.0
 Identities = 422/507 (83%), Positives = 463/507 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIRPDEISS+IR QIEQYN EV+V+N+GIVLQVGDGIARIHGL EVMAGELVEFEDGT
Sbjct: 1    MVTIRPDEISSIIRKQIEQYNQEVEVVNIGIVLQVGDGIARIHGLDEVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE+NNVG VLMGDGL I+EGSSVKATGKIAQIPVSDA+LGR+V+ALAQPIDGRG
Sbjct: 61   VGIALNLESNNVGAVLMGDGLMIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I+ASE R IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  KIAASESRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQ+VICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTIINQKGQDVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLD+ TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDRATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQIATI+ G NGYLD  E+  V+KFL QLREYL  +KPQFGEIIR+T+
Sbjct: 421  LKQSQSAPLTVEEQIATIYAGANGYLDILEIIQVRKFLVQLREYLITNKPQFGEIIRSTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAI+E IELF+LQ +K
Sbjct: 481  AFTEQAEALLKEAIQEHIELFLLQEQK 507


>dbj|BAL03668.1| ATP synthase CF1 alpha chain (chloroplast) [Bowenia serrulata]
          Length = 507

 Score =  812 bits (2098), Expect = 0.0
 Identities = 421/507 (83%), Positives = 463/507 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIRPDEISS+IR QIEQYN EV+++N+GIVLQVGDGIARIHGL EVMAGELV FEDGT
Sbjct: 1    MVTIRPDEISSIIRKQIEQYNQEVEIVNIGIVLQVGDGIARIHGLDEVMAGELVGFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE+NNVGVVLMGDGL I+EGSSVKATGKIAQIPVSDA+LGR+V+ALAQPIDGRG
Sbjct: 61   VGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I+ASE R IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  KITASESRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQNVICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTIINQKGQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLD+ TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDRATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQIATI+ G NGYLD  E+  V+KFL QLREYL  +KPQFGEIIR+T+
Sbjct: 421  LKQSQSAPLAVEEQIATIYAGANGYLDILEIVQVRKFLVQLREYLITNKPQFGEIIRSTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAI+E IELF+L+ +K
Sbjct: 481  AFTEQAEALLKEAIQEHIELFLLREQK 507


>ref|YP_008474548.1| ATP synthase CF1 subunit alpha (chloroplast) [Marsilea crenata]
            gi|474452476|gb|AGI51463.1| ATP synthase CF1 subunit
            alpha (chloroplast) [Marsilea crenata]
          Length = 507

 Score =  810 bits (2092), Expect = 0.0
 Identities = 422/507 (83%), Positives = 461/507 (90%)
 Frame = +1

Query: 1861 VMITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDG 2040
            ++I IRPDEISS+IR QIE Y  EV+V+N+G VLQVGDGIARIHGL +VMAGELVEFEDG
Sbjct: 1    MVINIRPDEISSIIRKQIEGYVPEVKVVNIGTVLQVGDGIARIHGLNKVMAGELVEFEDG 60

Query: 2041 TIGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGR 2220
            T+GIALNLE++NVG VLMGDGLTI+EG SVKATGKIAQIPVS++FLGR+V+ALAQPIDG+
Sbjct: 61   TVGIALNLESDNVGAVLMGDGLTIQEGGSVKATGKIAQIPVSESFLGRVVNALAQPIDGK 120

Query: 2221 GPISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 2400
            G I ASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIP+GRGQRELIIGDRQTGKTAV
Sbjct: 121  GQIPASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPVGRGQRELIIGDRQTGKTAV 180

Query: 2401 ATDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLA 2580
            ATDTILNQKGQNVICVYVAIGQKASSVAQVV T ++R ++EYTIVVSE A+SPATLQYLA
Sbjct: 181  ATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQYLA 240

Query: 2581 PYTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLL 2760
            PYTGAALAEYFMY+KQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLL
Sbjct: 241  PYTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 300

Query: 2761 ERAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 2940
            ERAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN
Sbjct: 301  ERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 360

Query: 2941 VGLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLRE 3120
            VG+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLRE
Sbjct: 361  VGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 420

Query: 3121 LLKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTT 3300
            LLKQ QSAPLSVEEQ+ATI+ G NGYLD  EV+ VK+FL QLREY+  +KPQFGEIIR+T
Sbjct: 421  LLKQSQSAPLSVEEQVATIYTGVNGYLDILEVEQVKRFLVQLREYVTTNKPQFGEIIRST 480

Query: 3301 KTLTEEAETMLREAIKEQIELFVLQLK 3381
            KT TEEAET+L+EAIKE  ELF+LQ K
Sbjct: 481  KTFTEEAETILKEAIKESTELFLLQEK 507


>gb|AFM54192.1| AtpA (chloroplast) [Ceratozamia hildae]
          Length = 507

 Score =  810 bits (2092), Expect = 0.0
 Identities = 419/507 (82%), Positives = 462/507 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIRPDEISS+IR QIEQYN EV+V+N+GIVLQVGDGIARIHGL EVMAGELVEFEDGT
Sbjct: 1    MVTIRPDEISSIIRKQIEQYNQEVEVVNIGIVLQVGDGIARIHGLDEVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE+NNVG VLMGDG  I+EGSSVKATGKIAQIPVSDA+LGR+V+ALAQPIDGRG
Sbjct: 61   VGIALNLESNNVGAVLMGDGFMIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I+ASE R IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  KITASESRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQ+VICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTIINQKGQDVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGA LAEYFMY++QHTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGATLAEYFMYREQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQI+AMKQVAGKLK                SDLD+ TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIRAMKQVAGKLKLELAQFAELEAFAQFASDLDRATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQIATI+ G NGYLD  E+  V+KFL QLREYL N+KPQFGEIIR+T+
Sbjct: 421  LKQSQSAPLTVEEQIATIYAGANGYLDILEIVQVRKFLVQLREYLINNKPQFGEIIRSTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAI+E IELF+L+ +K
Sbjct: 481  AFTEQAEALLKEAIQEHIELFLLREQK 507


>ref|NP_777397.1| ATP synthase CF1 alpha subunit [Anthoceros formosae]
            gi|48474822|sp|Q85AU2.1|ATPA_ANTFO RecName: Full=ATP
            synthase subunit alpha, chloroplastic; AltName: Full=ATP
            synthase F1 sector subunit alpha; AltName: Full=F-ATPase
            subunit alpha gi|27807858|dbj|BAC55333.1| ATPase alpha
            subunit (chloroplast) [Anthoceros formosae]
            gi|27807959|dbj|BAC55424.1| ATPase alpha subunit
            [Anthoceros formosae]
          Length = 507

 Score =  806 bits (2081), Expect = 0.0
 Identities = 420/507 (82%), Positives = 459/507 (90%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+ IRPDEIS++IR QIEQYN EV+VIN+G VLQVGDGIARI+GL +VMAGELVEFEDGT
Sbjct: 1    MVNIRPDEISNIIRKQIEQYNQEVKVINIGTVLQVGDGIARIYGLDKVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE++NVGVVLMGDGL+I+EGSSV+ATGKIAQIPVSDA+LGR+V+ALAQPIDG+G
Sbjct: 61   VGIALNLESDNVGVVLMGDGLSIQEGSSVEATGKIAQIPVSDAYLGRVVNALAQPIDGKG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I A E RLIESPAPGIISRRSVYEP+QTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  QIPAYEFRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKGQNVICVYVAIGQKASSVAQVV T  ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGQNVICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY+KQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQ+ATI+ G NGYLD  EV+ VKKFL QLREYL  +KPQF EIIR+TK
Sbjct: 421  LKQSQSAPLAVEEQVATIYTGVNGYLDVLEVEQVKKFLVQLREYLITNKPQFVEIIRSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAIKE  E F+LQ +K
Sbjct: 481  VFTEQAEIILKEAIKEHTEFFLLQEQK 507


>gb|AEX93512.1| ATP synthase alpha chain (chloroplast) [Echeandia sp. Steele 1101]
          Length = 507

 Score =  806 bits (2081), Expect = 0.0
 Identities = 417/506 (82%), Positives = 462/506 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+V+N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG+NVICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL ++LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLDLAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QS PL+VEEQ+ATI+ GTNG+LD FE+  VKKFL QLR YL+ +KPQF EII +TK
Sbjct: 421  LKQSQSDPLTVEEQVATIYTGTNGFLDSFEIGQVKKFLIQLRSYLRKNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLK 3381
            T TEEAET+L+EAI+EQ ELF+L+ K
Sbjct: 481  TFTEEAETLLKEAIQEQTELFLLEEK 506


>ref|YP_001312176.1| ATP synthase CF1 alpha chain [Cycas taitungensis]
            gi|452848996|ref|YP_007474675.1| ATP synthase CF1 alpha
            subunit (chloroplast) [Cycas revoluta]
            gi|190358170|sp|A6H5F1.1|ATPA_CYCTA RecName: Full=ATP
            synthase subunit alpha, chloroplastic; AltName: Full=ATP
            synthase F1 sector subunit alpha; AltName: Full=F-ATPase
            subunit alpha gi|149941493|dbj|BAF64917.1| ATP synthase
            CF1 alpha chain (chloroplast) [Cycas taitungensis]
            gi|372863151|gb|AEX99224.1| ATP synthase CF1 alpha
            subunit (chloroplast) [Cycas revoluta]
          Length = 507

 Score =  806 bits (2081), Expect = 0.0
 Identities = 418/507 (82%), Positives = 461/507 (90%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIRPDEISS+IR QI+QYN EV+V+N+GIVLQVGDGIARIHGL EVMAGELVEFEDGT
Sbjct: 1    MVTIRPDEISSIIRKQIKQYNQEVEVVNIGIVLQVGDGIARIHGLDEVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE+NNVG VLMGDGL I+EGSSV+ATGKIAQIPVSDA+ GR+V+ALAQPIDGRG
Sbjct: 61   VGIALNLESNNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYSGRVVNALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I+ASE R IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  KITASESRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQ+VICVYVAIGQKASSVAQVV   +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTIINQKGQDVICVYVAIGQKASSVAQVVNIFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMYK+QHTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYKEQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLD+ TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDRATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQIATI+ G NGYLD  E+  V+KFL QLREYL  +KPQFGEIIR+T+
Sbjct: 421  LKQSQSAPLTVEEQIATIYAGANGYLDILEIVQVRKFLVQLREYLITNKPQFGEIIRSTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAI+E IELF+L+ +K
Sbjct: 481  AFTEQAEALLKEAIQEHIELFLLREQK 507


>gb|ABU85310.1| ATP synthase CF1 alpha subunit [Cycas micronesica]
          Length = 507

 Score =  805 bits (2079), Expect = 0.0
 Identities = 417/507 (82%), Positives = 461/507 (90%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIRPDEISS+IR QI+QYN EV+V+N+GIVLQVGDGIARIHGL EVMAGELVEFEDGT
Sbjct: 1    MVTIRPDEISSIIRKQIKQYNQEVEVVNIGIVLQVGDGIARIHGLDEVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE+NNVG VLMGDGL I+EGSSV+ATGKIAQIPVSDA+ GR+V+ALAQPIDGRG
Sbjct: 61   VGIALNLESNNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYSGRVVNALAQPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I+ASE R IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  KITASESRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTI+NQKGQ+VICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTIINQKGQDVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY +QHTLIIYDDLSKQA+AYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYNEQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLD+ TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDRATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQIATI+ G NGYLD  ++  V+KFL QLREYL  +KPQFGEIIR+T+
Sbjct: 421  LKQSQSAPLTVEEQIATIYAGANGYLDILDIVQVRKFLVQLREYLITNKPQFGEIIRSTR 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE +L+EAI+E IELF+L+ +K
Sbjct: 481  AFTEQAEALLKEAIQEHIELFLLREQK 507


>gb|AEX93545.1| ATP synthase alpha chain (chloroplast) [Liriope spicata]
          Length = 507

 Score =  805 bits (2078), Expect = 0.0
 Identities = 417/504 (82%), Positives = 460/504 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+++N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG++VICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKSVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY+KQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL + LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QS PL+VEEQIATI+ G NGYLD+ E+  VKKFL QLR YLK +KPQF EII +TK
Sbjct: 421  LKQSQSDPLTVEEQIATIYTGANGYLDQLEIGQVKKFLIQLRTYLKKNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQ 3375
            T TEEAET+L+EAI+EQIELF+L+
Sbjct: 481  TFTEEAETLLKEAIQEQIELFLLE 504


>gb|AEX93513.1| ATP synthase alpha chain (chloroplast) [Hosta ventricosa]
          Length = 507

 Score =  804 bits (2077), Expect = 0.0
 Identities = 417/506 (82%), Positives = 462/506 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+V+N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG+NVICVYVAIGQKASSVAQVV TL+ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAEMADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHT IIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL ++LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ Q+ PL+VEEQ+ATI+ GTNG+LD FE+  VKKFL QLR YLK +KPQF EII +TK
Sbjct: 421  LKQSQADPLTVEEQVATIYTGTNGFLDSFEIGQVKKFLIQLRTYLKKNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLK 3381
            T TEEAET+L+EAI+EQ ELF+L+ K
Sbjct: 481  TFTEEAETLLKEAIQEQTELFLLEEK 506


>gb|AEJ10077.1| ATP synthase CF1 alpha subunit [Hosta ventricosa]
          Length = 506

 Score =  804 bits (2077), Expect = 0.0
 Identities = 417/506 (82%), Positives = 462/506 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+V+N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG+NVICVYVAIGQKASSVAQVV TL+ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAEMADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHT IIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL ++LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ Q+ PL+VEEQ+ATI+ GTNG+LD FE+  VKKFL QLR YLK +KPQF EII +TK
Sbjct: 421  LKQSQADPLTVEEQVATIYTGTNGFLDSFEIGQVKKFLIQLRTYLKKNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLK 3381
            T TEEAET+L+EAI+EQ ELF+L+ K
Sbjct: 481  TFTEEAETLLKEAIQEQTELFLLEEK 506


>gb|AEX93550.1| ATP synthase alpha chain (chloroplast) [Androstephium coeruleum]
          Length = 507

 Score =  804 bits (2076), Expect = 0.0
 Identities = 416/504 (82%), Positives = 460/504 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+++N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG+NVICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYRQQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++ LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QS PL+VEEQIATI+ G NGYLD  E+  VKKFL QLR YLKN+KPQF EII +TK
Sbjct: 421  LKQSQSDPLTVEEQIATIYTGANGYLDSLEIGQVKKFLIQLRTYLKNNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQ 3375
            T TEEAET+L++AI+EQ ELF+L+
Sbjct: 481  TFTEEAETLLKKAIQEQTELFLLE 504


>ref|YP_004935651.1| atpA gene product (chloroplast) [Sesamum indicum]
            gi|347448280|gb|AEO92691.1| ATP synthase CF1 alpha
            subunit (chloroplast) [Sesamum indicum]
            gi|496538586|gb|AGL45321.1| AtpA (chloroplast) [Sesamum
            indicum]
          Length = 507

 Score =  804 bits (2076), Expect = 0.0
 Identities = 417/504 (82%), Positives = 461/504 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+TIR DEIS++IR++IEQYN EV+++N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQ+GQNVICVYVAIGQKASSVAQVV +L+ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQQGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY+KQHTLIIYDD SKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYRKQHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++ LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL+VEEQI TI+ GTNGYLD  E+  V+KFL +LR YLK +KPQF EII +TK
Sbjct: 421  LKQSQSAPLAVEEQIMTIYTGTNGYLDSLEIGQVRKFLAELRTYLKTNKPQFQEIISSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQ 3375
            TLTEEAET+L+EAI+EQ++ FVLQ
Sbjct: 481  TLTEEAETILKEAIQEQMDRFVLQ 504


>ref|YP_004891431.1| ATP synthase CF1 alpha chain (chloroplast) [Pseudotsuga sinensis var.
            wilsoniana] gi|307683411|dbj|BAJ19684.1| ATP synthase CF1
            alpha chain [Pseudotsuga sinensis var. wilsoniana]
            gi|347977649|dbj|BAK86604.1| ATP synthase CF1 alpha chain
            [Pseudotsuga sinensis var. wilsoniana]
          Length = 507

 Score =  804 bits (2076), Expect = 0.0
 Identities = 425/507 (83%), Positives = 455/507 (89%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M  IR DEISS+IR QIEQYNNEV+V N+G VLQVGDGIARIHGL EVMAGELVEF DGT
Sbjct: 1    MGNIRLDEISSIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDEVMAGELVEFGDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNL ++NVGVVLMGDGL I+EGSSVKATGKIAQ+PVSDA+LGR+V+ALAQPIDG+G
Sbjct: 61   IGIALNLGSDNVGVVLMGDGLMIQEGSSVKATGKIAQVPVSDAYLGRVVNALAQPIDGKG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  QISASEFRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKGQNVICVYVAIGQKASSVAQVV T R+R ++EYTIVV+E ADS ATLQYLAP
Sbjct: 181  TDTILNQKGQNVICVYVAIGQKASSVAQVVNTFRDRGAMEYTIVVAETADSSATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMYKKQHT IIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL++QLGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMK+VAGKLK                SDLDK TQDQLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKATQDQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPL VEEQIATI+ GTNGYLD  E+  V+KFL QLREYL  +KPQFGEIIR+T 
Sbjct: 421  LKQSQSAPLKVEEQIATIYTGTNGYLDILEIVQVRKFLVQLREYLIKNKPQFGEIIRSTG 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
            T TEEA+ +L EA+KE  ELFVLQ +K
Sbjct: 481  TFTEEAQALLEEALKEHTELFVLQEQK 507


>ref|YP_007026124.1| ATP synthase CF1 alpha subunit (chloroplast) [Pellia endiviifolia]
            gi|408773087|gb|AFU88834.1| ATP synthase CF1 alpha
            subunit (chloroplast) [Pellia endiviifolia]
          Length = 507

 Score =  803 bits (2075), Expect = 0.0
 Identities = 417/507 (82%), Positives = 459/507 (90%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+ IRPDEISS+IR QIEQYN EV+++N+G VLQVGDGIARI+GL +VMAGELVEFEDGT
Sbjct: 1    MVNIRPDEISSVIRIQIEQYNQEVKIVNIGTVLQVGDGIARIYGLDKVMAGELVEFEDGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            +GIALNLE++NVGVVLMGDGL I+EGSSVKATG+IAQIPVSDA+LGR+V+ALAQPIDG+G
Sbjct: 61   VGIALNLESDNVGVVLMGDGLAIQEGSSVKATGQIAQIPVSDAYLGRVVNALAQPIDGKG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             I ASE RLIESPAPGIISRRSVYEP+QTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  QIPASEFRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKGQNVICVYVAIGQKASSVAQVV T  ER +++YTIVV+E A+SPATLQYLAP
Sbjct: 181  TDTILNQKGQNVICVYVAIGQKASSVAQVVNTFEERGALDYTIVVAEAANSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY+KQHTLI+YDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYRKQHTLIVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL+++LGEGS+TALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSKLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QSAPLSVEEQ+ATI+ G NGYLD  E   VKKFL QLREYL  +KPQF EIIR+TK
Sbjct: 421  LKQSQSAPLSVEEQVATIYTGVNGYLDVLETGQVKKFLVQLREYLMTNKPQFMEIIRSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLKK 3384
              TE+AE++L+EAIKE IELF+ Q +K
Sbjct: 481  VFTEQAESILKEAIKEHIELFLFQEEK 507


>gb|AEX93511.1| ATP synthase alpha chain (chloroplast) [Camassia scilloides]
          Length = 507

 Score =  803 bits (2074), Expect = 0.0
 Identities = 416/506 (82%), Positives = 461/506 (91%)
 Frame = +1

Query: 1864 MITIRPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGLCEVMAGELVEFEDGT 2043
            M+T+R DEIS++IR++IEQYN EV+V+N G VLQVGDGIARIHGL EVMAGELVEFE+GT
Sbjct: 1    MVTLRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 2044 IGIALNLETNNVGVVLMGDGLTIKEGSSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 2223
            IGIALNLE+NNVGVVLMGDGL I+EGSSVKATG+IAQIPVS+A+LGR+++ALA+PIDGRG
Sbjct: 61   IGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 2224 PISASEVRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 2403
             ISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 2404 TDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLAP 2583
            TDTILNQKG+NVICVYVAIGQKASSVAQVV T +ER ++EYTIVV+E ADSPATLQYLAP
Sbjct: 181  TDTILNQKGKNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAP 240

Query: 2584 YTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLE 2763
            YTGAALAEYFMY++QHT IIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF+LHSRLLE
Sbjct: 241  YTGAALAEYFMYREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 2764 RAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 2943
            RAAKL ++LGEGS+TALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 2944 GLSVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKGTQDQLARGQRLREL 3123
            G+SVSRVGSAAQIKAMKQVAGKLK                SDLDK TQ+QLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLREL 420

Query: 3124 LKQPQSAPLSVEEQIATIFIGTNGYLDRFEVQFVKKFLDQLREYLKNSKPQFGEIIRTTK 3303
            LKQ QS PL+VEEQ+ATI+ GTNG+LD FE+  VKKFL QLR YLK +KPQF EI+ +TK
Sbjct: 421  LKQSQSDPLTVEEQVATIYTGTNGFLDSFEIGQVKKFLIQLRTYLKKNKPQFQEILSSTK 480

Query: 3304 TLTEEAETMLREAIKEQIELFVLQLK 3381
            T TEEAET+L+EAI+EQ ELF+L+ K
Sbjct: 481  TFTEEAETLLKEAIQEQTELFLLEEK 506