BLASTX nr result
ID: Ephedra27_contig00022553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00022553
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 137 2e-30
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 136 3e-30
ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [A... 130 2e-28
ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I an... 124 1e-26
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 123 2e-26
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 122 4e-26
ref|XP_001773900.1| predicted protein [Physcomitrella patens] gi... 122 5e-26
ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I an... 121 8e-26
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 121 1e-25
gb|ACU18498.1| unknown [Glycine max] 121 1e-25
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 120 1e-25
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 120 1e-25
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 120 1e-25
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma... 120 1e-25
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 120 2e-25
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 120 2e-25
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 119 3e-25
ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I an... 119 5e-25
ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [S... 118 7e-25
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 117 2e-24
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 137 bits (344), Expect = 2e-30
Identities = 65/92 (70%), Positives = 74/92 (80%)
Frame = -1
Query: 277 KKKPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSE 98
KKK D+ DVP G+LPPHLELQRTRV+C DAPIHTE V YSGAYA+ GVDNSLRL
Sbjct: 12 KKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDH 71
Query: 97 FCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
FC NFR+EV L +E +EFDM+GIDA+IANAF
Sbjct: 72 FCHNFRVEVVRLTEEDMEFDMIGIDAAIANAF 103
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 136 bits (342), Expect = 3e-30
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = -1
Query: 262 AMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNF 83
A+DM DVPKG+LPPH+ELQRTRV+C DAP HTE VQYSGAY++ GVDNSLR+ +FC NF
Sbjct: 6 ALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNF 65
Query: 82 RIEVTTLNDETVEFDMVGIDASIANAF 2
R+EV L+++ +EFDM+GID SIANAF
Sbjct: 66 RVEVIRLSEDDMEFDMIGIDPSIANAF 92
>ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [Amborella trichopoda]
gi|548861841|gb|ERN19212.1| hypothetical protein
AMTR_s00061p00192780 [Amborella trichopoda]
Length = 304
Score = 130 bits (326), Expect = 2e-28
Identities = 62/98 (63%), Positives = 76/98 (77%), Gaps = 11/98 (11%)
Frame = -1
Query: 262 AMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNF 83
A+DM DVPKG+LP HL QRTRV+CASDA +HTEG+QYSGAYA+ GVDNSL L +FC+NF
Sbjct: 6 ALDMPDVPKGQLPEHLNFQRTRVLCASDAALHTEGIQYSGAYASMGVDNSLNLEKFCENF 65
Query: 82 RIEVTTLNDE-----------TVEFDMVGIDASIANAF 2
++EV + DE ++EFDMVGIDAS+ANAF
Sbjct: 66 KVEVIDIKDEESSGTDWDKENSIEFDMVGIDASLANAF 103
>ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Setaria italica]
Length = 372
Score = 124 bits (311), Expect = 1e-26
Identities = 56/93 (60%), Positives = 73/93 (78%)
Frame = -1
Query: 280 SKKKPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLS 101
+K K D+ D + KLP HLELQRTRVVC +DAPIHT+G QYSG YA +GVDNS+ +
Sbjct: 6 TKSKNQVGDVPDQQENKLPDHLELQRTRVVCNADAPIHTQGFQYSGTYAATGVDNSVSVE 65
Query: 100 EFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
+FCKNF+I++ L ++ +EFDM+G+DASIANAF
Sbjct: 66 KFCKNFKIDIKHLTEDDMEFDMIGVDASIANAF 98
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 123 bits (309), Expect = 2e-26
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = -1
Query: 274 KKPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEF 95
KK D+ DVP G+LPPHL+LQRTRVVC SDAPIHT+ + YSGAYA+ GVDNSL+L F
Sbjct: 12 KKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCF 71
Query: 94 CKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NF++EV L + +EFDM+GIDA+IANAF
Sbjct: 72 RDNFKVEVIQLTKDDMEFDMIGIDAAIANAF 102
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 122 bits (307), Expect = 4e-26
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = -1
Query: 253 MDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFRIE 74
+ DVP GKLPPHLE QRT V C +DAP+HT+ +QYSGAYA+ GVDNS+R+ FC NFR+E
Sbjct: 49 LSDVPMGKLPPHLEFQRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVE 108
Query: 73 VTTLNDETVEFDMVGIDASIANAF 2
V L ++ +EFDM+GID ++ANAF
Sbjct: 109 VMRLTEDDMEFDMIGIDPALANAF 132
>ref|XP_001773900.1| predicted protein [Physcomitrella patens]
gi|162674744|gb|EDQ61248.1| predicted protein
[Physcomitrella patens]
Length = 360
Score = 122 bits (306), Expect = 5e-26
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = -1
Query: 232 KLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFRIEVTTLNDE 53
+LPPHLELQRTRVVCA DAP +TE VQYSGAY GVDNSLR+ +FCKN R+E+ ++N+E
Sbjct: 12 ELPPHLELQRTRVVCAPDAPSYTESVQYSGAYMAYGVDNSLRIEDFCKNLRVEIISMNEE 71
Query: 52 TVEFDMVGIDASIANAF 2
+EFD+VGIDA+IANAF
Sbjct: 72 DIEFDIVGIDAAIANAF 88
>ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
rpac1-like [Setaria italica]
Length = 372
Score = 121 bits (304), Expect = 8e-26
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = -1
Query: 280 SKKKPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLS 101
+K K D+ D + KLP HLELQRTRVVC +DAPIHT+G QYSGA+ GVDNS+ +
Sbjct: 6 TKSKKQVDDVLDQQENKLPDHLELQRTRVVCNADAPIHTQGYQYSGAFTVMGVDNSVSVE 65
Query: 100 EFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
+FCKNF+I++ L ++ +EFDM+G+DASIANAF
Sbjct: 66 KFCKNFKIDIKRLTEDDMEFDMIGVDASIANAF 98
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 121 bits (303), Expect = 1e-25
Identities = 58/99 (58%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = -1
Query: 286 MSSKKKPMAMD----MDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVD 119
MS + + +D +D+VP KLPPHLEL +TRV+C +DAP+HT+ VQYSGAYA GVD
Sbjct: 16 MSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVD 74
Query: 118 NSLRLSEFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NS+RL FC+NF++EV L D +EFDM+GID +IANAF
Sbjct: 75 NSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAF 113
>gb|ACU18498.1| unknown [Glycine max]
Length = 233
Score = 121 bits (303), Expect = 1e-25
Identities = 58/99 (58%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = -1
Query: 286 MSSKKKPMAMD----MDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVD 119
MS + + +D +D+VP KLPPHLEL +TRV+C +DAP+HT+ VQYSGAYA GVD
Sbjct: 16 MSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVD 74
Query: 118 NSLRLSEFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NS+RL FC+NF++EV L D +EFDM+GID +IANAF
Sbjct: 75 NSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAF 113
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Citrus sinensis]
Length = 382
Score = 120 bits (302), Expect = 1e-25
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = -1
Query: 256 DMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFRI 77
D+ DVP+ KLPPH+E QRTRV C DAPIHTE V YSGAYA+ GVDNSL+L FC NFR+
Sbjct: 20 DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 78
Query: 76 EVTTLNDETVEFDMVGIDASIANAF 2
EV L + +EFD++GIDA+IANAF
Sbjct: 79 EVIRLTKDDMEFDLIGIDAAIANAF 103
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 120 bits (302), Expect = 1e-25
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = -1
Query: 256 DMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFRI 77
D+ DVP+ KLPPH+E QRTRV C DAPIHTE V YSGAYA+ GVDNSL+L FC NFR+
Sbjct: 59 DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 117
Query: 76 EVTTLNDETVEFDMVGIDASIANAF 2
EV L + +EFD++GIDA+IANAF
Sbjct: 118 EVIRLTKDDMEFDLIGIDAAIANAF 142
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 120 bits (302), Expect = 1e-25
Identities = 58/99 (58%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = -1
Query: 286 MSSKKKPMAMD----MDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVD 119
MS + + +D +D+VP KLPPHLEL +TRV+C +DAP+HT+ VQYSGAYA GVD
Sbjct: 11 MSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVD 69
Query: 118 NSLRLSEFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NS+RL FC+NF++EV L D +EFDM+GID +IANAF
Sbjct: 70 NSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAF 108
>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
gi|194690246|gb|ACF79207.1| unknown [Zea mays]
gi|413926820|gb|AFW66752.1| hypothetical protein
ZEAMMB73_992882 [Zea mays]
Length = 372
Score = 120 bits (302), Expect = 1e-25
Identities = 56/87 (64%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Frame = -1
Query: 253 MDDVP---KGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNF 83
+DDVP + KLP +LELQRTRVVC +DAPIHT+G QYSGA+A G+DNS+ + +FCKNF
Sbjct: 13 VDDVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNSVSVDKFCKNF 72
Query: 82 RIEVTTLNDETVEFDMVGIDASIANAF 2
+IE+ L ++ +EFDM+GIDASIANAF
Sbjct: 73 KIEINRLTEDYMEFDMIGIDASIANAF 99
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Solanum tuberosum]
Length = 393
Score = 120 bits (300), Expect = 2e-25
Identities = 54/90 (60%), Positives = 69/90 (76%)
Frame = -1
Query: 271 KPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFC 92
K D+ D+PKGKLPPH+ELQRTRV+C S AP +TE V YSGAYA GVDNS+R +F
Sbjct: 24 KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83
Query: 91 KNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NF++E+ L ++ +EFDM+GID S+ANAF
Sbjct: 84 NNFKVEIVRLEEDELEFDMIGIDPSLANAF 113
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 120 bits (300), Expect = 2e-25
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = -1
Query: 256 DMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFRI 77
D+ DVP G+LPPHL+LQRTRV+C S+AP +TE +QYSGAYA GVDNSL F +NFR+
Sbjct: 3 DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62
Query: 76 EVTTLNDETVEFDMVGIDASIANAF 2
E+ ++++ +EFD++GIDA+IANAF
Sbjct: 63 EIVSMDEHDIEFDLIGIDAAIANAF 87
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Solanum lycopersicum]
Length = 393
Score = 119 bits (299), Expect = 3e-25
Identities = 54/90 (60%), Positives = 69/90 (76%)
Frame = -1
Query: 271 KPMAMDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFC 92
K D+ D+PKGKLPPH+ELQRTRV+C S AP +TE V YSGAYA GVDNS+R +F
Sbjct: 24 KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83
Query: 91 KNFRIEVTTLNDETVEFDMVGIDASIANAF 2
NF++E+ L ++ +EFDM+GID S+ANAF
Sbjct: 84 DNFKVEIVRLEEDELEFDMIGIDPSLANAF 113
>ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
rpac1-like [Brachypodium distachyon]
Length = 360
Score = 119 bits (297), Expect = 5e-25
Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
Frame = -1
Query: 259 MDMDDVP---KGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCK 89
MDMDDVP + KLP HLE QRTRV C +DAP HT+G QYSGA+A GVDNS+ + +FC
Sbjct: 1 MDMDDVPTQQRNKLPDHLERQRTRVTCKADAPTHTQGFQYSGAFAAMGVDNSVSVEKFCN 60
Query: 88 NFRIEVTTLNDETVEFDMVGIDASIANAF 2
+F+I++ L ++ +EFDM+G+DASIANAF
Sbjct: 61 SFKIKINRLTEDDMEFDMIGVDASIANAF 89
>ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor]
gi|241933300|gb|EES06445.1| hypothetical protein
SORBIDRAFT_04g006420 [Sorghum bicolor]
Length = 370
Score = 118 bits (296), Expect = 7e-25
Identities = 55/95 (57%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
Frame = -1
Query: 277 KKKPMAMDMDDVP---KGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLR 107
KK + ++D+ P + KLP +LE+QRTRVVC +DAPIHT+G QYSG +A GVDNS+
Sbjct: 3 KKGTKSKEVDNAPNQQENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVS 62
Query: 106 LSEFCKNFRIEVTTLNDETVEFDMVGIDASIANAF 2
+ +FCKNF+IE+ L ++ +EFDM+GIDASIANAF
Sbjct: 63 VEKFCKNFKIEINRLTEDDMEFDMIGIDASIANAF 97
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cicer arietinum]
Length = 388
Score = 117 bits (293), Expect = 2e-24
Identities = 54/86 (62%), Positives = 69/86 (80%)
Frame = -1
Query: 259 MDMDDVPKGKLPPHLELQRTRVVCASDAPIHTEGVQYSGAYATSGVDNSLRLSEFCKNFR 80
M+++DVP KL PHLEL +TRVVC+ DAP HT+ + YSGAYA GVDNS+RL FC+NF+
Sbjct: 24 MNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNFK 82
Query: 79 IEVTTLNDETVEFDMVGIDASIANAF 2
+EV L D+ +EFDM+GID S+ANAF
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAF 108