BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022443
         (528 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   127   1e-27
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   117   2e-24
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     115   5e-24
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   115   6e-24
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   113   2e-23
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       107   2e-21
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   107   2e-21
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   103   2e-20
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   103   3e-20
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   103   3e-20
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   101   9e-20
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus...   100   2e-19
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19

>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322390|gb|EEF05766.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 486

 Score =  127 bits (320), Expect = 1e-27
 Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 3/178 (1%)
 Frame = +3

Query: 3   LDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKIT 173
           L G+  V  D+FV   LK L  YP  AL FF+W             YNA++R LG++   
Sbjct: 79  LVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNALVRVLGRDDSI 138

Query: 174 ENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYR 353
             FW V +EMK  G+ MD DT++ +  ++ K ++ ED+VRL+ +M + P +KP    CY 
Sbjct: 139 GEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDGP-FKPSVQDCYI 197

Query: 354 ILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +L +++     ++D    V+D +K+ G  + K VYDG HR  T+AG+FDEAEK+++ M
Sbjct: 198 LLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAM 255


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
 Frame = +3

Query: 18  DVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKV 191
           ++S++  ++ LK L  YP  AL FF W             YN +LR L + +   +FW V
Sbjct: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            EEMK  G+ MD DT++ +  ++ K +M ED+V+LF +M + P +KP    C  +L ++S
Sbjct: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP-YKPSVQDCSLLLRSIS 347

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
                ++     V + ++S G  + K VYDG HR LT  GRFDEAEK+M+ M
Sbjct: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKIMKAM 399


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  117 bits (293), Expect = 2e-24
 Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
 Frame = +3

Query: 18  DVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKV 191
           ++S++  ++ LK L  YP  AL FF W             YN +LR L + +   +FW V
Sbjct: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            EEMK  G+ MD DT++ +  ++ K ++ ED+V+LF +M + P +KP    C  +L ++S
Sbjct: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDGP-YKPSVQDCSLLLRSIS 347

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
                ++     V + ++S G  + K VYDG HR LT  GRFDEAEK+M+ M
Sbjct: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  115 bits (289), Expect = 5e-24
 Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
 Frame = +3

Query: 12  ISDVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFW 185
           I D+S++  +  LK L  YP  A +FF W             YNA  R L ++     FW
Sbjct: 225 IVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEHNSVTYNAAARVLSRDDSIGEFW 284

Query: 186 KVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCA 365
            + EEMKG G+ +D D ++ +  ++ K +M EDSV+L+ +M + P +KP A  C  +L +
Sbjct: 285 GMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYEFMMDGP-FKPSAQDCNLLLRS 343

Query: 366 LSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +S     +   A  V   ++S G  + K  YDG HR LT+AGRFDEAEK+M+ M
Sbjct: 344 ISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEAEKMMKVM 397


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  115 bits (288), Expect = 6e-24
 Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVA 194
           +S++  V  LK L   P  AL+FF W             YNA+ R L +      FW V 
Sbjct: 246 LSDNFVVRVLKELRICPSKALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWSVI 305

Query: 195 EEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSH 374
           EEMKG G  +D DT++ +  ++ K +M ED+V+L+  M + P +KP A  C  +L ++S 
Sbjct: 306 EEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYELMMDGP-YKPSAQDCSMLLRSISA 364

Query: 375 QQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
               ++D    V   F+S G  + K VYDG HR LT+AG FDEAEK+ + M
Sbjct: 365 NDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVM 415


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  113 bits (283), Expect = 2e-23
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 3/178 (1%)
 Frame = +3

Query: 3   LDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKIT 173
           L+G+  +  D+FV   LK L  YP  AL FF W             YNA+ R LG++   
Sbjct: 220 LEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSI 279

Query: 174 ENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYR 353
             FW V EEMK  G  MD DT++ +  ++ K ++  D+V+L+ +M + P +KP    C  
Sbjct: 280 GEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDGP-FKPSVQDCSM 338

Query: 354 ILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +L ++S     +++    V++ +++ G  + K VYDG HR LT+ G FDEA K+M+ M
Sbjct: 339 LLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCM 396


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  112 bits (280), Expect = 5e-23
 Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
 Frame = +3

Query: 21  VSEDDFVSALKTL----YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWK 188
           VS++  +  LK L    YP  A +FF+W             YN +LR L +E+  E FW 
Sbjct: 229 VSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWG 288

Query: 189 VAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCAL 368
           V +EM   GF +D DT++ +   + K +M +D+V L+  M +  Q+KP  G C  +L ++
Sbjct: 289 VVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDG-QFKPSLGECNILLRSI 347

Query: 369 SHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +     ++D    V++ F++ G    K++YD  HRCLT  GRF+EAEK+ E M
Sbjct: 348 AQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAM 400


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  110 bits (276), Expect = 1e-22
 Identities = 57/156 (36%), Positives = 85/156 (54%)
 Frame = +3

Query: 60  YPGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTF 239
           YP  AL FF+W             YN + R LG++     FW + EEMK  G  MD DT+
Sbjct: 244 YPLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTY 303

Query: 240 VPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDV 419
           + +  ++ K +M ED+V+L+  M + P +KP    C  +L ++S     ++     V + 
Sbjct: 304 IKISRQFQKNKMLEDAVKLYEIMMDGP-YKPSVQDCTMLLRSISLSSNPDLALVFRVTEK 362

Query: 420 FKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +++ G  + K VYDG HR LT+ GRFDEA K+ME M
Sbjct: 363 YEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESM 398


>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 641

 Score =  109 bits (272), Expect = 4e-22
 Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVA 194
           +S++  +  LK L   P  A  FF+W             YNA+ R L K    E FW + 
Sbjct: 230 LSDNFVIRVLKELRNCPLKAYKFFQWVGKQSSYQLNTVTYNAVARVLAKMDSIEEFWSIL 289

Query: 195 EEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSH 374
           EEMK  G  +D DT++ +  +  K +M ED+V+L+  M ++  +KP    C  +L  +S 
Sbjct: 290 EEMKSVGHQLDLDTYIKISRQLQKNRMMEDAVKLYELMMDS-LYKPTVVDCVVLLRTISA 348

Query: 375 QQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
               N+D    V   F+S G  + KVVYD  HR LT+AG+FDEAEK+++ M
Sbjct: 349 SDKPNIDLVFRVAKKFESTGYTISKVVYDSIHRSLTSAGKFDEAEKMVQTM 399


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  109 bits (272), Expect = 4e-22
 Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 4/173 (2%)
 Frame = +3

Query: 21  VSEDDFVSALKTLY----PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWK 188
           VS++  +  LK L     P  A +FF+W             YN +LR L +E+  E FW 
Sbjct: 229 VSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQHSTVTYNGILRVLCREESIEEFWG 288

Query: 189 VAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCAL 368
           V +EM   GF +D DT++ +   + K +M +D+V L+  M +  Q+KP  G C  +L ++
Sbjct: 289 VVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDG-QFKPSLGECNILLRSI 347

Query: 369 SHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +     ++D    V++ F++ G    K++YD  HRCLT  GRF+EAEK+ E M
Sbjct: 348 AQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAM 400


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/152 (36%), Positives = 82/152 (53%)
 Frame = +3

Query: 72  ALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVI 251
           A  FF+W             YN +LR L +E+  + FW V  EM   GF +D DT+V V 
Sbjct: 252 AYRFFKWIESSSDFEHTTVTYNGVLRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVS 311

Query: 252 SRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSR 431
             + K  M+ED V+L+  M ++P +KP    C  +L ALS     ++     VI+ F + 
Sbjct: 312 RSFQKNAMFEDGVKLYEHMMDSP-YKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAG 370

Query: 432 GGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           G  + K +YDG HR LT  G+F+EAE ++E+M
Sbjct: 371 GNSLSKTLYDGIHRSLTRLGKFEEAEGIVEKM 402


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
           gi|565465717|ref|XP_006290750.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559456|gb|EOA23647.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559457|gb|EOA23648.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  107 bits (267), Expect = 2e-21
 Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXV-YNAMLRALGKEKITENFWKV 191
           +S++  +  LK L  +P  AL FF W            V YNA LR L +      FW V
Sbjct: 223 LSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVAEFWNV 282

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + P +KP+   C  +L +LS
Sbjct: 283 VDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGP-FKPLVHDCSTLLRSLS 341

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
                ++D    V   F+S G  + K VYDG HR LT+ GRFDEAE++++ M
Sbjct: 342 AGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAM 393


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
           gi|548855973|gb|ERN13836.1| hypothetical protein
           AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/155 (34%), Positives = 84/155 (54%)
 Frame = +3

Query: 63  PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFV 242
           P  AL+F+ W             YN+++R LG+    + FW + +EMK  GF MD D++V
Sbjct: 187 PLKALDFYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYV 246

Query: 243 PVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVF 422
            +  R+ K  M +++V L+ +M+E P ++P    C  +L  L+       D    V+  F
Sbjct: 247 KLSRRFQKWNMLKEAVELYEFMSEGP-YQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKF 305

Query: 423 KSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           +  G  + K +YDG HR LT+ GRFDEA+ ++E M
Sbjct: 306 EGAGNSLTKSIYDGIHRSLTSMGRFDEAQNILEAM 340


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
           gi|557105401|gb|ESQ45735.1| hypothetical protein
           EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  103 bits (256), Expect = 3e-20
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXV-YNAMLRALGKEKITENFWKV 191
           +S++  +  LK L  +P  AL FF W            + YNA LR L +      FW V
Sbjct: 223 LSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYKHSTITYNAALRVLARPNSVAEFWSV 282

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            +EMK  G  +D DT++ V+ ++ K +M  ++V+L+  M + P +KP A  C  +L +LS
Sbjct: 283 VDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMMDGP-FKPSAQDCSLLLRSLS 341

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
                ++D    V   ++S G  + K VYDG HR LT+ GRFDEAE++++ M
Sbjct: 342 AGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAM 393


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  103 bits (256), Expect = 3e-20
 Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVA 194
           +S++  +  LK L   P  A  FF W             YNA+ R L + +  E FW V 
Sbjct: 228 LSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVI 287

Query: 195 EEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSH 374
           EEMK  G  +D DT++ +  +  + +M ED+V+L+  M +    KP+   C  +L ++S 
Sbjct: 288 EEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMMDG-SCKPLVQDCNMLLKSISA 346

Query: 375 QQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
               N+D    V   ++S G  + K +YDG HR LT+AG FDEAE ++  M
Sbjct: 347 NDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTM 397


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  103 bits (256), Expect = 3e-20
 Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXXV-YNAMLRALGKEKITENFWKV 191
           +S++  +  LK L  +P  AL FF W            V YNA LR L +      FW V
Sbjct: 223 LSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 282

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            +EMK  G  MD DT++ V  ++ K +M  ++V+L+ +M + P +KP    C  +L  LS
Sbjct: 283 VDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGP-FKPSIQDCSLLLRYLS 341

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
            +   ++D    V   ++S G  + K VYDG HR LT+ GRFDEAE++ + M
Sbjct: 342 ARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 393


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  101 bits (252), Expect = 9e-20
 Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
 Frame = +3

Query: 21  VSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXX---VYNAMLRALGKEKITENFW 185
           +S++  +  LK L  +P  AL FF W                YNA LR L +      FW
Sbjct: 224 LSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFW 283

Query: 186 KVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCA 365
            V +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + P +KP    C  +L  
Sbjct: 284 SVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGP-FKPSIQDCSLLLRY 342

Query: 366 LSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
           LS     ++D    V   ++S G  + K VYDG HR LT+ GRFDEAE++ + M
Sbjct: 343 LSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 396


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  100 bits (250), Expect = 2e-19
 Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
 Frame = +3

Query: 30  DDFVS-ALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVAEE 200
           D FV+  LK L   P  A  FF W             YNA+ R L +    + FW + EE
Sbjct: 233 DSFVTRVLKELQNCPLKAYKFFHWVGSQSVYEHNTVTYNAVARVLARPGSIKEFWSILEE 292

Query: 201 MKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSHQQ 380
           MK   + +D DT+  +  +  K QM E++V L+  M +   +KP    C  +L A+S   
Sbjct: 293 MKSVRYQLDIDTYTTITMQLVKNQMIENAVELYELMMDG-SYKPSTHDCCVLLNAISTSD 351

Query: 381 CLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
             N D A  V   ++S G  + K +YDG HR LT+AG+FDEAEK+++ M
Sbjct: 352 FPNSDLAFRVAKKYESVGHTLTKEIYDGIHRSLTSAGKFDEAEKIVKTM 400


>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score =  100 bits (249), Expect = 2e-19
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
 Frame = +3

Query: 21  VSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKVA 194
           +S++  +  LK L   P  +  FF W             YNA+   L +    + FW V 
Sbjct: 226 LSDNFVIRVLKDLRNTPLKSYKFFHWVGTQPGYEHNTVTYNAVASVLARNDSIQEFWSVI 285

Query: 195 EEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALSH 374
           EE+K  G  +D DT++ +  +  K +M ED+V+L+  M +   +KP+   C  +L ++S 
Sbjct: 286 EELKSVGHELDIDTYIKISRQLQKNRMMEDAVKLYEHMMDG-SYKPLVQDCSLLLKSISA 344

Query: 375 QQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
               N+D    V   ++S G  + K +YDG HR LT AG+FDEAE ++  M
Sbjct: 345 SDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRSLTGAGKFDEAENIVRTM 395


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
 Frame = +3

Query: 18  DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXXVYNAMLRALGKEKITENFWKV 191
           ++SE   V  L+ L   P  AL FF W             YN M   LG+      FW V
Sbjct: 227 ELSEKFVVRVLRDLRVCPLKALRFFRWVEQCAGYEHNSVTYNGMSLVLGQASSIGEFWSV 286

Query: 192 AEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILCALS 371
            EEMK  G  +D DT++ +  ++ K +M ED+V+L+  M + P +KP       +L ++S
Sbjct: 287 IEEMKVAGQELDLDTYIKLSRQFQKSKMVEDAVKLYELMMDGP-YKPSVQDVSILLRSIS 345

Query: 372 HQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEM 527
             +  ++D    V+  F+S G  + K VYDG HR LT  GRFDEAE  +  M
Sbjct: 346 ANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEAEDTLIAM 397