BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022317
         (525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18258.1| unknown [Picea sitchensis]                              63   5e-08
gb|EMT09150.1| Polyadenylate-binding protein 2 [Aegilops tauschii]     60   4e-07
ref|XP_006400562.1| hypothetical protein EUTSA_v10014075mg [Eutr...    59   7e-07
ref|XP_006400561.1| hypothetical protein EUTSA_v10014075mg [Eutr...    59   7e-07
gb|EMT29134.1| Polyadenylate-binding protein 2 [Aegilops tauschii]     57   2e-06
gb|EMS62491.1| Polyadenylate-binding protein 2 [Triticum urartu]       56   4e-06
ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845...    56   4e-06
ref|NP_568388.1| RNA recognition motif-containing protein [Arabi...    55   7e-06
ref|XP_006280024.1| hypothetical protein CARUB_v10025900mg [Caps...    55   7e-06
ref|XP_002961991.1| hypothetical protein SELMODRAFT_9008 [Selagi...    55   7e-06
gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsi...    55   7e-06
ref|XP_006409296.1| hypothetical protein EUTSA_v10022568mg [Eutr...    55   1e-05
ref|XP_006842180.1| hypothetical protein AMTR_s00078p00155240 [A...    55   1e-05
gb|EOY22839.1| Splicing factor-related [Theobroma cacao]               55   1e-05
ref|XP_006286523.1| hypothetical protein CARUB_v10001292mg [Caps...    55   1e-05
gb|EMT09148.1| Polyadenylate-binding protein, cytoplasmic and nu...    55   1e-05

>gb|ABR18258.1| unknown [Picea sitchensis]
          Length = 970

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/98 (36%), Positives = 56/98 (57%)
 Frame = +1

Query: 136 GVYKDHTLGEESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFA 315
           G + +H  G+E    T+YVG LP  +++EQLI LFS +G I+E K+  D  V G+ + + 
Sbjct: 682 GSHFEHNHGKEIDHSTVYVGYLPPTMEEEQLIKLFSSFGRIVEAKVIRDD-VKGSGKGYG 740

Query: 316 FIRFAEERSADRAATIMNGCMLKNSVLVVRVSSGYTSS 429
           F++F       +A   MNG  L+   L V ++SG+  S
Sbjct: 741 FVKFNNIHCTAQAIVHMNGYRLEGKTLAV-MASGWPPS 777


>gb|EMT09150.1| Polyadenylate-binding protein 2 [Aegilops tauschii]
          Length = 1066

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
 Frame = +1

Query: 4   KSFHRLQSEAFSTANLSYPLCATSSPSIEVEARIYTSDIYGMSQGVYKDHTLGEESKSQT 183
           K F +  S  F+T    Y     S  + ++E R    D         ++HT+     S T
Sbjct: 177 KPFKKRLSVRFATDVSCYTYSTESFGAAKLEKRKALFDDQDSHLCKRQEHTVSLSQDSVT 236

Query: 184 I--------YVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEER 339
           +        YVG LP  V   +LI LF  +G I+  K+  D    G  + + F+++AE R
Sbjct: 237 LKEVDDTNLYVGNLPTSVTSHKLIELFLPFGRIVRSKVADDRFT-GLSQGYGFVKYAEPR 295

Query: 340 SADRAATIMNGCMLKNSVLVVRVSSGYTSSFDPQI 444
           SA  A   MNG ++    L VRV+   TS F P +
Sbjct: 296 SATAAIERMNGRLVDGKTLEVRVAGPPTSVFYPSM 330


>ref|XP_006400562.1| hypothetical protein EUTSA_v10014075mg [Eutrema salsugineum]
           gi|557101652|gb|ESQ42015.1| hypothetical protein
           EUTSA_v10014075mg [Eutrema salsugineum]
          Length = 333

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
 Frame = +1

Query: 175 SQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRA 354
           + ++YVG LP DV  E L  +FS+YGS+L +KI +D  V G  + + F+ F+  RSAD A
Sbjct: 6   NNSVYVGGLPYDVTDEALRRVFSIYGSVLNIKIVNDRSVRG--KCYGFVTFSNRRSADDA 63

Query: 355 ATIMNGCMLKNSVLVV---------RVSSGYTSSFDPQ 441
              M+G  +   V+ V         R++ G    F PQ
Sbjct: 64  IQDMDGKSIGGRVVRVNEVTTRGGGRLNPGPQGRFQPQ 101


>ref|XP_006400561.1| hypothetical protein EUTSA_v10014075mg [Eutrema salsugineum]
           gi|557101651|gb|ESQ42014.1| hypothetical protein
           EUTSA_v10014075mg [Eutrema salsugineum]
          Length = 313

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
 Frame = +1

Query: 175 SQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRA 354
           + ++YVG LP DV  E L  +FS+YGS+L +KI +D  V G  + + F+ F+  RSAD A
Sbjct: 6   NNSVYVGGLPYDVTDEALRRVFSIYGSVLNIKIVNDRSVRG--KCYGFVTFSNRRSADDA 63

Query: 355 ATIMNGCMLKNSVLVV---------RVSSGYTSSFDPQ 441
              M+G  +   V+ V         R++ G    F PQ
Sbjct: 64  IQDMDGKSIGGRVVRVNEVTTRGGGRLNPGPQGRFQPQ 101


>gb|EMT29134.1| Polyadenylate-binding protein 2 [Aegilops tauschii]
          Length = 1074

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 51/98 (52%)
 Frame = +1

Query: 145 KDHTLGEESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIR 324
           KD +  +E     +YVG LP  V   +LI LF  +G I+  K+  D    G  + + F++
Sbjct: 240 KDGSKLKEVDDTNLYVGNLPASVSSHKLIELFLPFGRIVRSKVADDRFT-GVSQGYGFVK 298

Query: 325 FAEERSADRAATIMNGCMLKNSVLVVRVSSGYTSSFDP 438
           +AE RSA  A   MNG ++    L VRV+   TS  +P
Sbjct: 299 YAEPRSATTAIERMNGRLVDGKALEVRVAGPPTSVSNP 336


>gb|EMS62491.1| Polyadenylate-binding protein 2 [Triticum urartu]
          Length = 878

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
 Frame = +1

Query: 34   FSTANLSYPLCATSS----PSIEVEARIYTSDIYGMS--QGVYKDHTLGEESKS---QTI 186
            +     SYP CAT++       ++  R     + G+   +        G E +      +
Sbjct: 687  YGMVRYSYPSCATAAIDHMDGYQIGGRTLVVRVAGLPNPRDCLTLPAPGNEQRQIDMTNL 746

Query: 187  YVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRAATIM 366
            YV  LP+ V  E+LI +F   G I + K+  D    G  R F F++FA+   A  A T M
Sbjct: 747  YVFHLPLHVTTEKLIEIFLPCGQITQAKVVIDWHT-GASRGFGFVKFADAYGAAVALTHM 805

Query: 367  NGCMLKNSVLVVRVSSGYTSSFD 435
            NGC L+  +L VR++  + S  D
Sbjct: 806  NGCPLEGHILGVRIAGVHPSDMD 828



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/92 (35%), Positives = 48/92 (52%)
 Frame = +1

Query: 163 EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERS 342
           +E     +YVG LP  V   +LI LF  +G I+  K+  D    G  + + F+++AE RS
Sbjct: 245 KEVDDTNLYVGNLPASVSSHKLIELFLPFGRIVRSKVADDRFT-GVSQGYGFVKYAEPRS 303

Query: 343 ADRAATIMNGCMLKNSVLVVRVSSGYTSSFDP 438
           A  A   MNG ++    L VRV+   TS  +P
Sbjct: 304 ATAAIERMNGRLVDGKTLEVRVAGPPTSVSNP 335


>ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
           distachyon]
          Length = 929

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
 Frame = +1

Query: 4   KSFHRLQSEAFSTANLSYPLCATSSPSIEVEARIYTSDIYGMSQGVYKDHTLG------- 162
           K F +  S  F+T    Y     S  + ++E R    D      G  ++HTL        
Sbjct: 138 KPFKKRLSVRFATDVSCYTYNTESFGAGKLEKRKAQFDDQDKHLGKRQEHTLPLSQEGGK 197

Query: 163 -EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEER 339
            +E  +  +YVG LP  V   +LI LF  +G I+  K+ +D    G  + + F+++ +  
Sbjct: 198 LKEVDNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKV-ADECFTGLSKGYGFVKYDDPH 256

Query: 340 SADRAATIMNGCMLKNSVLVVRVSSGYTSSFDPQI 444
           SA  A   MNG ++   +L VRV+    S  +P I
Sbjct: 257 SATAAINRMNGRLVDGKILEVRVAGVPPSGSNPSI 291



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
 Frame = +1

Query: 127 MSQGVYKDHT---LGEESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFS-DGIVN 294
           +S    + HT   L +E     +YV  +P  +D ++LI +F  +G I   ++ +  G  +
Sbjct: 390 LSNSAVESHTDARLIKEIDMANLYVCNIPTSIDTKKLIEIFLPFGKITHARVAAHQGTYS 449

Query: 295 GTIRTFAFIRFAEERSADRAATIMNGCMLKNSVLVVRVSSGYTSSFDPQISG 450
           G  R + F++FA+ + A  A T+M+G +++   LVVRV+   +S+  P + G
Sbjct: 450 GKGR-YGFVKFADSQCAAEAITLMDGALVEGETLVVRVAGLSSSASSPAVHG 500


>ref|NP_568388.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|20260444|gb|AAM13120.1| glycine-rich RNA-binding
           protein, putative [Arabidopsis thaliana]
           gi|28059296|gb|AAO30045.1| glycine-rich RNA-binding
           protein, putative [Arabidopsis thaliana]
           gi|332005391|gb|AED92774.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 337

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +1

Query: 181 TIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRAAT 360
           ++YVG LP D+ +E +  +FS+YGS+L VKI +D  V G  + + F+ F+  RSAD A  
Sbjct: 8   SVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRG--KCYGFVTFSNRRSADDAIE 65

Query: 361 IMNG 372
            M+G
Sbjct: 66  DMDG 69


>ref|XP_006280024.1| hypothetical protein CARUB_v10025900mg [Capsella rubella]
           gi|387169546|gb|AFJ66205.1| hypothetical protein 34G24.3
           [Capsella rubella] gi|482548728|gb|EOA12922.1|
           hypothetical protein CARUB_v10025900mg [Capsella
           rubella]
          Length = 806

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/83 (33%), Positives = 47/83 (56%)
 Frame = +1

Query: 163 EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERS 342
           +E     +Y+G LP  +D + LI LFS +G I+  K+  D  V G  +T+ F+++A+ + 
Sbjct: 474 KEYDETNLYIGFLPPMLDDDGLINLFSSFGEIVMAKVIKDR-VTGLSKTYGFVKYADVQM 532

Query: 343 ADRAATIMNGCMLKNSVLVVRVS 411
           A+ A   MNG   +   L VR++
Sbjct: 533 ANTAVQAMNGYRFEGRTLAVRIA 555


>ref|XP_002961991.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
           gi|302775356|ref|XP_002971095.1| hypothetical protein
           SELMODRAFT_9010 [Selaginella moellendorffii]
           gi|300161077|gb|EFJ27693.1| hypothetical protein
           SELMODRAFT_9010 [Selaginella moellendorffii]
           gi|300170650|gb|EFJ37251.1| hypothetical protein
           SELMODRAFT_9008 [Selaginella moellendorffii]
          Length = 80

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = +1

Query: 184 IYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRAATI 363
           +YVG LP   D E L  LFS +G I EVK+  D    G  + + F++F +  +A +A   
Sbjct: 6   LYVGYLPATYDDESLKRLFSSFGQIEEVKVIKDR-TTGASKGYGFVKFTDPAAASQAVFS 64

Query: 364 MNGCMLKNSVLVVRVS 411
           MNG  +++  L VR++
Sbjct: 65  MNGWKIEDKTLAVRIA 80


>gb|AAM62695.1| glycine-rich RNA-binding protein-like [Arabidopsis thaliana]
          Length = 337

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = +1

Query: 181 TIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRAAT 360
           ++YVG LP D+ +E +  +FS+YGS+L VKI +D  V G  + + F+ F+  RSAD A  
Sbjct: 8   SVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRG--KCYGFVTFSNRRSADDAIE 65

Query: 361 IMNG 372
            M+G
Sbjct: 66  DMDG 69


>ref|XP_006409296.1| hypothetical protein EUTSA_v10022568mg [Eutrema salsugineum]
           gi|557110458|gb|ESQ50749.1| hypothetical protein
           EUTSA_v10022568mg [Eutrema salsugineum]
          Length = 776

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = +1

Query: 163 EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERS 342
           +E     +Y+G LP  ++ + LI LFS +G I+  K+  D  V+G  R + F+++A+ + 
Sbjct: 449 KEYDETNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDR-VSGLSRGYGFVKYADVQM 507

Query: 343 ADRAATIMNGCMLKNSVLVVRVS 411
           A+ A   MNG  L+   L VR++
Sbjct: 508 ANTATQAMNGYWLEGKTLAVRIA 530


>ref|XP_006842180.1| hypothetical protein AMTR_s00078p00155240 [Amborella trichopoda]
           gi|548844229|gb|ERN03855.1| hypothetical protein
           AMTR_s00078p00155240 [Amborella trichopoda]
          Length = 805

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/86 (33%), Positives = 49/86 (56%)
 Frame = +1

Query: 154 TLGEESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAE 333
           T  +E     +Y+G LP ++D + LI LFS +G I+  K+  D I  G  + + F+++++
Sbjct: 525 TAVKEYDDTNLYIGYLPPNLDDDGLIRLFSPFGEIVMAKVIKDRI-TGLSKGYGFVKYSD 583

Query: 334 ERSADRAATIMNGCMLKNSVLVVRVS 411
              A +A   MNG  L+  V+ VRV+
Sbjct: 584 VTQAIQATASMNGYRLEGRVIAVRVA 609


>gb|EOY22839.1| Splicing factor-related [Theobroma cacao]
          Length = 801

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = +1

Query: 163 EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERS 342
           +E     +Y+G LP ++D + LI+LFS YG I+  K+  D  V G  + + F+++A    
Sbjct: 496 KEYDDTNLYIGYLPPNLDDDGLISLFSSYGDIVMAKVIKDR-VTGLSKGYGFVKYANVDM 554

Query: 343 ADRAATIMNGCMLKNSVLVVRVS 411
           A+ A   MNG  L+   + VRV+
Sbjct: 555 ANNAIKGMNGYRLEGRTIAVRVA 577


>ref|XP_006286523.1| hypothetical protein CARUB_v10001292mg [Capsella rubella]
           gi|482555229|gb|EOA19421.1| hypothetical protein
           CARUB_v10001292mg [Capsella rubella]
          Length = 352

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +1

Query: 181 TIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEERSADRAAT 360
           ++YVG LP D+ +E +  +FS+YGS+L VKI +D  V G  + + F+ FA  RS D A  
Sbjct: 8   SVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSVRG--KCYGFVTFANRRSVDDAIE 65

Query: 361 IMNG 372
            M+G
Sbjct: 66  DMDG 69


>gb|EMT09148.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Aegilops
           tauschii]
          Length = 962

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
 Frame = +1

Query: 4   KSFHRLQSEAFSTANLSYPLCATSSPSIEVEARIYTSDIYGMSQGVYKDHTLG------- 162
           K F +  S  F+T    Y     S  + ++E R    D         ++HT+        
Sbjct: 181 KPFKKRLSVRFATDVSCYTYSTESFGAAKLEKRKAQFDDQDSRLCKRQEHTVSLPQEGVK 240

Query: 163 -EESKSQTIYVGCLPIDVDKEQLIALFSMYGSILEVKIFSDGIVNGTIRTFAFIRFAEER 339
            +E     +YVG LP  V   +L  LF  +G I++ ++  D    G  R + F+++AE R
Sbjct: 241 LKEVDDTNLYVGNLPASVTSNKLKELFLPFGRIVQSRVADDRFT-GVSRGYGFVKYAEPR 299

Query: 340 SADRAATIMNGCMLKNSVLVVRVSSGYTSSFDPQISGGYFSMQQQHKDFGCHS 498
           SA  A   MNG ++    L VRV+     S  P +S    SMQ   + +G  S
Sbjct: 300 SATAAIGRMNGRLVDGKTLEVRVAE---VSVPPSVSNP--SMQSVSETYGLPS 347