BLASTX nr result

ID: Ephedra27_contig00022309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022309
         (651 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16154.1| unknown [Picea sitchensis]                              65   2e-08

>gb|ABR16154.1| unknown [Picea sitchensis]
          Length = 565

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 70/211 (33%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
 Frame = -3

Query: 565 MSRSRKVENWWHREG---DYHNCHDSPTSIAYQKPTALEGGSDDPVVMTCTKGASYHSGG 395
           M  S+K +  WH E     +H      T+IA Q     +  S+ P        +S+    
Sbjct: 1   MMSSQKADRLWHGESAIEPHHAVQAVSTTIASQISNTSK--SEGPTF--AKDNSSFQR-- 54

Query: 394 LIPQSVAXXXXXXXXXXXN----AFSHMRERGSMPSLPPCS--FPNPNPVVDPTHQVSST 233
           L+PQ+V+                 FS       + S P  S   P  + VV+P + +SST
Sbjct: 55  LVPQAVSSDSPEPVDSGQENPFPRFSLSSSSKKLNSSPMSSNIIPALSNVVNPEN-ISST 113

Query: 232 SSTFCTNLHFSHPSTT----AAALPFLPHPTK-----------QSCLSQTLFSGDYMRQP 98
           SSTFCT+LHFS  S +       LPFLPHP++           QS  SQ+LFSGDYM+  
Sbjct: 114 SSTFCTDLHFSPSSISQHHPPGILPFLPHPSECSLRASVMPPSQSAFSQSLFSGDYMK-- 171

Query: 97  PQGYHDSSHCAPSSFEEIFTMFDGGVSEGSQ 5
            Q Y D+    P   ++IF  F    SE SQ
Sbjct: 172 -QSYGDTHTGDP--LQDIFN-FPDVASECSQ 198


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