BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022202
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citr...    59   5e-07
gb|EXB36250.1| hypothetical protein L484_013685 [Morus notabilis]      59   9e-07
ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Caps...    58   1e-06
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|ABK25122.1| unknown [Picea sitchensis]                              57   3e-06
ref|XP_002319140.2| pentatricopeptide repeat-containing family p...    56   4e-06
ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Popu...    56   4e-06
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar...    56   4e-06
ref|XP_002319139.1| predicted protein [Populus trichocarpa]            56   4e-06
emb|CAC01820.1| putative protein [Arabidopsis thaliana]                56   4e-06
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ...    55   1e-05

>ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citrus clementina]
           gi|568850720|ref|XP_006479049.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Citrus sinensis]
           gi|557545612|gb|ESR56590.1| hypothetical protein
           CICLE_v10019425mg [Citrus clementina]
          Length = 588

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/79 (35%), Positives = 43/79 (54%)
 Frame = -2

Query: 239 RDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFLWAASQ 60
           +D K  +  LR+     S+ R  + +CG+  +  L+ E L  +  DWEAA   FLWA  Q
Sbjct: 106 KDAKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ 165

Query: 59  QGFNHNGAAHHSIIFILCK 3
            G+ H+   +H++I IL K
Sbjct: 166 SGYAHSTREYHTMIAILGK 184


>gb|EXB36250.1| hypothetical protein L484_013685 [Morus notabilis]
          Length = 603

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = -2

Query: 242 DRDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFLWAAS 63
           DRD++  L  LRD     S+ R  L+ C V+ +  L+ + L  +  DWEAA   FLWA  
Sbjct: 120 DRDIEALLRILRDGTSC-SEMRRKLDQCVVVASSELVAQVLGRVRNDWEAAFTFFLWAGK 178

Query: 62  QQGFNHNGAAHHSIIFILCK 3
           Q G+ H+   +HS+I IL K
Sbjct: 179 QLGYAHSVREYHSMIAILGK 198


>ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Capsella rubella]
           gi|482555340|gb|EOA19532.1| hypothetical protein
           CARUB_v10002473mg [Capsella rubella]
          Length = 580

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/84 (35%), Positives = 43/84 (51%)
 Frame = -2

Query: 254 DRIQDRDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFL 75
           D++   D+      L+DC     + R  L  C V P++ L+ E L     DWEAA   F+
Sbjct: 95  DKVVSEDVGKISKLLKDCGSDRKELRDKLEGCDVKPSNELVVEILSQARNDWEAAFTFFV 154

Query: 74  WAASQQGFNHNGAAHHSIIFILCK 3
           WA  QQG+  +   +HS+I IL K
Sbjct: 155 WAGKQQGYVRSVREYHSMISILGK 178


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = -2

Query: 239 RDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFLWAASQ 60
           +D+K  LA + +     SQ +  L  C ++ +  L+ E L     DWEAA   FLWA  Q
Sbjct: 126 KDVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLWAGKQ 185

Query: 59  QGFNHNGAAHHSIIFILCK 3
            G+ H+   +HS+I IL K
Sbjct: 186 PGYAHSVREYHSMISILGK 204


>gb|ABK25122.1| unknown [Picea sitchensis]
          Length = 572

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
 Frame = -2

Query: 197 DVHS----QGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFLWAASQQGFNHNGAAH 30
           D+HS    + R AL+DCG IP+ NL+ + L+ L  D +AA  +F WA SQ  ++H  + +
Sbjct: 117 DLHSLPIEEARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVY 176

Query: 29  HSIIFIL 9
           H++I IL
Sbjct: 177 HTMISIL 183


>ref|XP_002319140.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550324994|gb|EEE95063.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 518

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = -2

Query: 263 RGVDRIQD---RDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEA 93
           RG++   D   +D K  +  L++  D   + +  +  CG+  +  L+ E L  +  DWEA
Sbjct: 12  RGLNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEA 71

Query: 92  ALIIFLWAASQQGFNHNGAAHHSIIFILCK 3
           A   FLWAA Q G+ H+   +HS+I IL K
Sbjct: 72  AFTFFLWAARQPGYAHSVREYHSMISILGK 101


>ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Populus trichocarpa]
           gi|550308165|gb|ERP46607.1| hypothetical protein
           POPTR_0671s00210g [Populus trichocarpa]
          Length = 599

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = -2

Query: 263 RGVDRIQD---RDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEA 93
           RG++   D   +D K  +  L++  D   + +  +  CG+  +  L+ E L  +  DWEA
Sbjct: 93  RGLNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEA 152

Query: 92  ALIIFLWAASQQGFNHNGAAHHSIIFILCK 3
           A   FLWAA Q G+ H+   +HS+I IL K
Sbjct: 153 AFTFFLWAARQPGYAHSVREYHSMISILGK 182


>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15010, mitochondrial; Flags: Precursor
           gi|332004721|gb|AED92104.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 572

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/84 (33%), Positives = 43/84 (51%)
 Frame = -2

Query: 254 DRIQDRDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFL 75
           D +   D+      ++DC     + R  L +C V P++ L+ E L  +  DWE A   F+
Sbjct: 90  DELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFV 149

Query: 74  WAASQQGFNHNGAAHHSIIFILCK 3
           WA  QQG+  +   +HS+I IL K
Sbjct: 150 WAGKQQGYVRSVREYHSMISILGK 173


>ref|XP_002319139.1| predicted protein [Populus trichocarpa]
          Length = 518

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = -2

Query: 263 RGVDRIQD---RDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEA 93
           RG++   D   +D K  +  L++  D   + +  +  CG+  +  L+ E L  +  DWEA
Sbjct: 12  RGLNLSDDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEA 71

Query: 92  ALIIFLWAASQQGFNHNGAAHHSIIFILCK 3
           A   FLWAA Q G+ H+   +HS+I IL K
Sbjct: 72  AFTFFLWAARQPGYAHSVREYHSMISILGK 101


>emb|CAC01820.1| putative protein [Arabidopsis thaliana]
          Length = 532

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/84 (33%), Positives = 43/84 (51%)
 Frame = -2

Query: 254 DRIQDRDLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFL 75
           D +   D+      ++DC     + R  L +C V P++ L+ E L  +  DWE A   F+
Sbjct: 50  DELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFV 109

Query: 74  WAASQQGFNHNGAAHHSIIFILCK 3
           WA  QQG+  +   +HS+I IL K
Sbjct: 110 WAGKQQGYVRSVREYHSMISILGK 133


>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317482|gb|EFH47904.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 524

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = -2

Query: 236 DLKCFLAALRDCDDVHSQGRVALNDCGVIPTHNLIHEALKCLVGDWEAALIIFLWAASQQ 57
           D+   +  L++C     + R  L +C V P++ L+ E L  +  DWE A   F+WA  QQ
Sbjct: 45  DVGTIVKLLKNCGSDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWAGKQQ 104

Query: 56  GFNHNGAAHHSIIFILCK 3
           G+  +   +HS+I IL K
Sbjct: 105 GYVRSVREYHSMISILGK 122