BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022189
         (561 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004491574.1| PREDICTED: putative exosome complex componen...   143   3e-32
gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus...   140   2e-31
ref|XP_002318044.1| exonuclease-related family protein [Populus ...   140   2e-31
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   140   3e-31
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   139   6e-31
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809...   138   8e-31
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A...   137   1e-30
gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus...   137   2e-30
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   137   2e-30
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr...   136   3e-30
ref|XP_004969374.1| PREDICTED: putative exosome complex componen...   136   4e-30
ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [S...   136   4e-30
ref|XP_006476772.1| PREDICTED: putative exosome complex componen...   135   7e-30
ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative ...   135   7e-30
tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]     134   1e-29
gb|ACN36007.1| unknown [Zea mays]                                     134   1e-29
gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays]           134   1e-29
ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]...   133   3e-29
ref|XP_003611006.1| Exosome complex component rrp40 [Medicago tr...   132   6e-29
ref|XP_006644470.1| PREDICTED: putative exosome complex componen...   130   2e-28

>ref|XP_004491574.1| PREDICTED: putative exosome complex component rrp40-like [Cicer
           arietinum]
          Length = 104

 Score =  143 bits (361), Expect = 3e-32
 Identities = 69/91 (75%), Positives = 81/91 (89%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A EFG+LK GYMFECS+G++R LLS PTCPVL+ LGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 14  AGEFGALKEGYMFECSTGLSRMLLSSPTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPST 73

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI+V+NAIMN+E LSGVQQKIM E+LL+RVQ
Sbjct: 74  TIIVANAIMNSETLSGVQQKIMAEKLLQRVQ 104


>gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus vulgaris]
          Length = 240

 Score =  140 bits (354), Expect = 2e-31
 Identities = 66/91 (72%), Positives = 82/91 (90%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG+LK GYMFEC++G++R LLS PTCPVL+ALGK +SFEIAVG+NGRVWVNA ST T
Sbjct: 150 AAEFGALKDGYMFECTTGLSRRLLSSPTCPVLDALGKKISFEIAVGLNGRVWVNAASTQT 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI+V+NAIMN+E LS  QQ+IMVE+LL+R+Q
Sbjct: 210 TIIVANAIMNSETLSDAQQRIMVEKLLKRIQ 240


>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
           gi|118482713|gb|ABK93275.1| unknown [Populus
           trichocarpa] gi|222858717|gb|EEE96264.1|
           exonuclease-related family protein [Populus trichocarpa]
          Length = 242

 Score =  140 bits (354), Expect = 2e-31
 Identities = 67/92 (72%), Positives = 82/92 (89%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG+LK GYMFECS+G++R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNA S + 
Sbjct: 150 AAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNANSPSI 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQH 286
            I+V+NAIMN+E LSGVQQKIM E+LL+++Q+
Sbjct: 210 VIIVANAIMNSETLSGVQQKIMAEKLLQKIQN 241


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  140 bits (352), Expect = 3e-31
 Identities = 67/91 (73%), Positives = 81/91 (89%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A EFG+LK GYMFECS+G++R LLS PTCPVL+ LGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 150 AGEFGALKEGYMFECSTGLSRMLLSTPTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPST 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI+V+NA++N+E LSGVQQKIM E+LL+RVQ
Sbjct: 210 TIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Glycine max] gi|571439680|ref|XP_006574927.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Glycine max]
          Length = 240

 Score =  139 bits (349), Expect = 6e-31
 Identities = 66/90 (73%), Positives = 81/90 (90%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG+LK GYMFEC++G++R LLS PTCPVL+ALGK LSFEIAVG+NGRVWV+A S  T
Sbjct: 150 AAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSFEIAVGLNGRVWVSAASPQT 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
           TI+V+NAIMN+E LSG QQ+IMVE+LLER+
Sbjct: 210 TIVVANAIMNSETLSGAQQRIMVEKLLERI 239


>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
           max] gi|571433381|ref|XP_006572880.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X2 [Glycine
           max] gi|571433383|ref|XP_006572881.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X3 [Glycine
           max] gi|571433385|ref|XP_006572882.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X4 [Glycine
           max]
          Length = 240

 Score =  138 bits (348), Expect = 8e-31
 Identities = 66/91 (72%), Positives = 81/91 (89%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG+LK GYMFEC++G +R LLS PTCPVL+ALGK LSFEIAVG+NGRVWV+A S  T
Sbjct: 150 AAEFGALKDGYMFECTTGQSRMLLSSPTCPVLDALGKKLSFEIAVGLNGRVWVDAASPHT 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI+V+NAIMN+E LSG QQ+IMVE+LL+R+Q
Sbjct: 210 TIVVANAIMNSETLSGAQQRIMVEKLLQRIQ 240


>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
           gi|548832362|gb|ERM95158.1| hypothetical protein
           AMTR_s00009p00262150 [Amborella trichopoda]
          Length = 240

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/91 (74%), Positives = 81/91 (89%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           ASEFG +K GYMFE S+G+AR LLS+PTCPVL+ALGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 150 ASEFGPIKDGYMFESSTGLARLLLSRPTCPVLDALGKKLSFEIAVGLNGRVWVNASSPST 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
            ILV+NAIM+AE LSG QQ+I+VE+LL+RVQ
Sbjct: 210 VILVANAIMSAEFLSGAQQRILVEKLLQRVQ 240


>gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
          Length = 240

 Score =  137 bits (345), Expect = 2e-30
 Identities = 65/91 (71%), Positives = 80/91 (87%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG+LK GYMFEC++G++R LLS PTCPVL+ALGK +SFEIAVG+NGRVWVNA S  T
Sbjct: 150 AAEFGALKDGYMFECTTGLSRRLLSSPTCPVLDALGKKISFEIAVGLNGRVWVNAASPQT 209

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI V+NAIMN+E LS  QQ+IMVE+LL+R+Q
Sbjct: 210 TITVANAIMNSETLSDAQQRIMVEKLLKRIQ 240


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  137 bits (345), Expect = 2e-30
 Identities = 68/91 (74%), Positives = 80/91 (87%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMFE S+G++R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 147 AAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNASSPST 206

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
            ILV+NAIMN+E LS VQQKIMV++LL+R+Q
Sbjct: 207 VILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
           gi|567894648|ref|XP_006439812.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542073|gb|ESR53051.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542074|gb|ESR53052.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
          Length = 238

 Score =  136 bits (343), Expect = 3e-30
 Identities = 67/91 (73%), Positives = 79/91 (86%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMFE SSG++R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 148 AAEFGLLKDGYMFETSSGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPST 207

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
            +LVSNAIMN+E LS VQQKIMV++LL+R++
Sbjct: 208 VVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238


>ref|XP_004969374.1| PREDICTED: putative exosome complex component rrp40-like [Setaria
           italica]
          Length = 239

 Score =  136 bits (342), Expect = 4e-30
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMF+ S+GM+R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNAP+  T
Sbjct: 149 AAEFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPAPNT 208

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG+QQ+ MVE LLER+
Sbjct: 209 VILVSNAIMRSESLSGIQQRAMVENLLERL 238


>ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [Sorghum bicolor]
           gi|241928063|gb|EES01208.1| hypothetical protein
           SORBIDRAFT_03g030230 [Sorghum bicolor]
          Length = 239

 Score =  136 bits (342), Expect = 4e-30
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMF+ S+GM+R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNAP+ +T
Sbjct: 149 AAEFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPAAST 208

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG++Q+ MVE LLER+
Sbjct: 209 VILVSNAIMRSESLSGIKQRAMVENLLERL 238


>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Citrus sinensis] gi|568845839|ref|XP_006476773.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Citrus sinensis]
          Length = 238

 Score =  135 bits (340), Expect = 7e-30
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMFE S+G++R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 148 AAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPST 207

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
            +LVSNAIMN+E LS VQQKIMV++LL+R++
Sbjct: 208 VVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238


>ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative [Ricinus communis]
           gi|223550521|gb|EEF52008.1| Exosome complex exonuclease
           RRP40, putative [Ricinus communis]
          Length = 234

 Score =  135 bits (340), Expect = 7e-30
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A EFG LK GYMFECS+G++R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNA S +T
Sbjct: 122 AVEFGVLKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGINGRVWVNATSPST 181

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
            I+V+NAIMN+E LS VQQKIMV+ LL++++
Sbjct: 182 IIVVANAIMNSETLSAVQQKIMVDNLLDKIR 212


>tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/90 (72%), Positives = 77/90 (85%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMF+ S+GM+R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T
Sbjct: 149 AAEFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAAST 208

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG++Q+ MVE LLER+
Sbjct: 209 VILVSNAIMRSESLSGIKQRAMVENLLERL 238


>gb|ACN36007.1| unknown [Zea mays]
          Length = 104

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/90 (72%), Positives = 77/90 (85%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMF+ S+GM+R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T
Sbjct: 14  AAEFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAAST 73

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG++Q+ MVE LLER+
Sbjct: 74  VILVSNAIMRSESLSGIKQRAMVENLLERL 103


>gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/90 (72%), Positives = 77/90 (85%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMF+ S+GM+R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T
Sbjct: 149 AAEFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEVLGKXLSFEIAVGLNGRVWVNAPAAST 208

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG++Q+ MVE LLER+
Sbjct: 209 VILVSNAIMRSESLSGIKQRAMVENLLERL 238


>ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]
           gi|195622378|gb|ACG33019.1| exosome complex exonuclease
           RRP40 [Zea mays] gi|238006308|gb|ACR34189.1| unknown
           [Zea mays] gi|414881121|tpg|DAA58252.1| TPA: exosome
           complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  133 bits (334), Expect = 3e-29
 Identities = 64/90 (71%), Positives = 77/90 (85%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A++FG LK GYMF+ S+GM+R LLS PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T
Sbjct: 149 AAKFGQLKDGYMFDTSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAAST 208

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            ILVSNAIM +E LSG++Q+ MVE LLER+
Sbjct: 209 VILVSNAIMRSESLSGIKQRAMVENLLERL 238


>ref|XP_003611006.1| Exosome complex component rrp40 [Medicago truncatula]
           gi|355512341|gb|AES93964.1| Exosome complex component
           rrp40 [Medicago truncatula]
          Length = 142

 Score =  132 bits (332), Expect = 6e-29
 Identities = 63/91 (69%), Positives = 79/91 (86%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A EFG+LK GYMFECS+G++R +LS PTCPVL+  GK LSFEIAVG+NGRV VNA S +T
Sbjct: 52  AGEFGALKEGYMFECSTGLSRMVLSTPTCPVLDTFGKKLSFEIAVGLNGRVSVNASSPST 111

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERVQ 289
           TI+++NA++N+E LSGVQQKIM E+L+ERVQ
Sbjct: 112 TIIIANALINSEALSGVQQKIMAEKLVERVQ 142


>ref|XP_006644470.1| PREDICTED: putative exosome complex component rrp40-like [Oryza
           brachyantha]
          Length = 220

 Score =  130 bits (327), Expect = 2e-28
 Identities = 64/90 (71%), Positives = 76/90 (84%)
 Frame = -1

Query: 561 ASEFGSLKSGYMFECSSGMARGLLSKPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTAT 382
           A+EFG LK GYMFE S+G++R LLS PTCPVLEALGK LSFEIAVG+NGRVWVNAPS + 
Sbjct: 130 AAEFGQLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPSPSN 189

Query: 381 TILVSNAIMNAERLSGVQQKIMVERLLERV 292
            I+VSNAI+ +E LSG+ Q+ MVE LLER+
Sbjct: 190 VIVVSNAIIKSESLSGIGQRSMVESLLERL 219