BLASTX nr result

ID: Ephedra27_contig00022005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022005
         (2048 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305681.1| PREDICTED: uncharacterized protein LOC101310...    65   9e-08
gb|EXB34475.1| hypothetical protein L484_004865 [Morus notabilis]      60   4e-06
ref|XP_003619110.1| hypothetical protein MTR_6g042080 [Medicago ...    59   6e-06
ref|XP_001765058.1| predicted protein [Physcomitrella patens] gi...    59   6e-06

>ref|XP_004305681.1| PREDICTED: uncharacterized protein LOC101310541 [Fragaria vesca
            subsp. vesca]
          Length = 424

 Score = 65.5 bits (158), Expect = 9e-08
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
 Frame = +2

Query: 1301 VIVIDNIEKDVGPFDVMDMLDAVVSGVQKVVMPPALSYEHFTKAFVFFKDDSSLVEAYDT 1480
            +++++N+EK++ PF +M+ +   VS   +  +  + S E +T+A +   +  +L +  D 
Sbjct: 263  MVIVENLEKEISPFTIMEFIQQQVSITCQASVSASKSSELYTRAIILLDNKENLEKFSDF 322

Query: 1481 LLG-DFFIASSKGRPWVVLD----PMELEYKNDFIAFTAECSKGRRKSLRPLLSGTLGIV 1645
            L   D  I SS GRPW V +    P  L+  N      ++    R    R L S  L +V
Sbjct: 323  LESPDHVIISSAGRPWFVTEKKALPKTLKPSNQTFMLLSQTPLER----RTLSSNELSVV 378

Query: 1646 PQDSPEYPRAEKMKKHYLEFRRQYVLLNKQIKFFEGQVTQK 1768
               + EY  A +++  + EF +    L + +   EG+++QK
Sbjct: 379  LSGTREYMEARELQIMFKEFTKHQCGLQRGLHLEEGKISQK 419


>gb|EXB34475.1| hypothetical protein L484_004865 [Morus notabilis]
          Length = 426

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
 Frame = +2

Query: 1301 VIVIDNIEKDVGPFDVMDMLDAVVSGVQKVVMPPALSYEHFTKAFVFFKDDSSLVEAYDT 1480
            +IV++N+EKD+ P  +M+ +      + +  + P+LS ++ T+  +      +     D 
Sbjct: 259  LIVVENLEKDLTPLAMMEFISKEAKVLSQAFILPSLSSDYVTRGNILLDSRRNFERLCDF 318

Query: 1481 LLG-DFFIASSKGRPWVVLDPME----LEYKNDFIAFTAECSKGRRKSLRPLLSGT-LGI 1642
            L   D  + SS GRPWV+ + M     L    +  A  ++   G+ K++    SG+ L +
Sbjct: 319  LENPDQVVVSSNGRPWVITEKMSVRDALLVSIETFALISQKILGKTKNIG---SGSGLKV 375

Query: 1643 VPQDSPEYPRAEKMKKHYLEFRRQYVLLNKQIKFFEGQVTQK 1768
            V + + EY  A+K+   Y EF      L K++   EG++ Q+
Sbjct: 376  VRRGTVEYTIAKKLSNLYKEFSNHQKKLQKRLIVDEGKIWQE 417


>ref|XP_003619110.1| hypothetical protein MTR_6g042080 [Medicago truncatula]
            gi|355494125|gb|AES75328.1| hypothetical protein
            MTR_6g042080 [Medicago truncatula]
          Length = 275

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
 Frame = +2

Query: 1289 KNTKVIVIDNIEKDVGPFDVMDMLDAVVSGVQKVVMPPALSYEHFTKAFVFFKDDSSLVE 1468
            +N  +I+I N++K++ P   ++ L         + + P+LS+E +T+  +    +    +
Sbjct: 114  RNVCMILIGNVDKELCPSTAVEFLYKHTQVSASIFIFPSLSFEIYTRGAIMTHTEQDFQK 173

Query: 1469 AYDTLLG-DFFIASSKGRPWVVLD-PMELEYKNDFIAFTAECSKGRRKSLRPLLSGTLGI 1642
              D L   ++ I S  GRPWVV++  + L+     I      S+  ++  +   S TL I
Sbjct: 174  LCDFLTDQNYIITSLTGRPWVVIEKQVGLKNVKASIGTLFPKSENAKQEGKNKTSNTLRI 233

Query: 1643 VPQDSPEYPRAEKMKKHYLEFRRQYVLLNKQIKFFEGQVTQ 1765
            V   + E+  A   +  + EF    V L+K++ F EG V++
Sbjct: 234  VNSGTQEFKIASDKRDLFTEFADHQVRLHKKLAFLEGSVSE 274


>ref|XP_001765058.1| predicted protein [Physcomitrella patens] gi|162683645|gb|EDQ70053.1|
            predicted protein [Physcomitrella patens]
          Length = 883

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
 Frame = +2

Query: 1295 TKVIVIDNIEKDVGPFDVMDMLDAVVSGVQKVVMPPALSYEHFTKAFVFFKDDSSLVEAY 1474
            +++++I+N+E+DV  +DVM +L     GV  V + P L +  +T  ++ ++D SS  +A 
Sbjct: 718  SRLLLIENMEEDVSAYDVMQLLQENTPGVCAVHIMPRLRFGVWTSGYILYQDHSSAEKAL 777

Query: 1475 DTLLGDF---FIASSKGRPWVVLDPMELEYKNDFIAFTAECSKGRRKSLRPLLSGTLGIV 1645
              L  D+   F+ SS GRPW+V  P E  ++     F A  +      ++   SG +GI+
Sbjct: 778  KWLT-DYSVRFVISSNGRPWIV-SPSEDVHEPRLYGFAAHTA----FKIQVDNSGIIGII 831

Query: 1646 PQD--------------SPEYPRAEKMKKHYLEFRRQYVLLNKQI 1738
                             S  Y  A K ++ Y ++ + Y+ L ++I
Sbjct: 832  SDQPSAHCLSVVTKTSHSTAYSLALKKQEDYEKYNKWYMELREKI 876


Top