BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00022000
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...    99   9e-19
emb|CBI36234.3| unnamed protein product [Vitis vinifera]               99   9e-19
gb|EXC45444.1| hypothetical protein L484_000697 [Morus notabilis]      94   3e-17
gb|EXB23110.1| hypothetical protein L484_016122 [Morus notabilis]      94   3e-17
ref|XP_004506979.1| PREDICTED: putative pentatricopeptide repeat...    80   9e-17
gb|EMT13280.1| hypothetical protein F775_05245 [Aegilops tauschii]     91   3e-16
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    90   3e-16
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-16
ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group] g...    90   3e-16
gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japo...    90   3e-16
gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indi...    90   3e-16
gb|ABR16520.1| unknown [Picea sitchensis]                              87   3e-16
gb|AEW07833.1| hypothetical protein 0_12580_02, partial [Pinus r...    87   8e-16
ref|XP_006341663.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-15
ref|XP_006306315.1| hypothetical protein CARUB_v10012185mg [Caps...    89   1e-15
ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-15
ref|NP_173004.1| pentatricopeptide repeat-containing protein [Ar...    88   1e-15
tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea m...    88   1e-15
ref|XP_004956000.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat...    87   2e-15

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 44/67 (65%), Positives = 58/67 (86%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG L+DAY+FI KMPI+PD +IWG+ LNACR+Y NV+LGELAA+H+FE+D+K+
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKS 698

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 699 VGYYILL 705


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 44/67 (65%), Positives = 58/67 (86%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG L+DAY+FI KMPI+PD +IWG+ LNACR+Y NV+LGELAA+H+FE+D+K+
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKS 698

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 699 VGYYILL 705


>gb|EXC45444.1| hypothetical protein L484_000697 [Morus notabilis]
          Length = 880

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 42/67 (62%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG LDDA++FI KMPINPD++IWG+ LNACR++  V LGELAA+H+FE+D ++
Sbjct: 647 VVDLLGRAGRLDDAHEFIRKMPINPDAAIWGALLNACRLHRRVDLGELAAQHIFEMDEES 706

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 707 VGYYILL 713


>gb|EXB23110.1| hypothetical protein L484_016122 [Morus notabilis]
          Length = 880

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 42/67 (62%), Positives = 56/67 (83%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG LDDA++FI KMPINPD++IWG+ LNACR++  V LGELAA+H+FE+D ++
Sbjct: 647 VVDLLGRAGRLDDAHEFIRKMPINPDAAIWGALLNACRLHRRVDLGELAAQHIFEMDEES 706

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 707 VGYYILL 713


>ref|XP_004506979.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cicer arietinum]
          Length = 682

 Score = 80.1 bits (196), Expect(2) = 9e-17
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG L +A + I+ MP+ P+S +WGS L ACR++ NVQL E+AAK + EL+ KN
Sbjct: 453 IVDLLGRAGHLKEALEVILNMPLKPNSIVWGSLLGACRVHKNVQLAEVAAKEILELEPKN 512

Query: 382 SVPYVAL 362
              YV L
Sbjct: 513 GAVYVLL 519



 Score = 32.3 bits (72), Expect(2) = 9e-17
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = -3

Query: 363 SKRWDGMHLATQNMSERKVKKQP--------*TVFAFVAGDGIQSQAENT*VYSFLDS 214
           SK+W+ +H   + M ER +KK P          V+ FVAGD  QS  +   +Y+ L++
Sbjct: 526 SKKWENLHKVRRLMMERGIKKTPGCSLMEMKGIVYEFVAGD--QSHPQCKEIYAKLEN 581


>gb|EMT13280.1| hypothetical protein F775_05245 [Aegilops tauschii]
          Length = 641

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD++IWG+ L+ACR++ NV+L E++AK LFELD+ N
Sbjct: 252 MVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRVHKNVELAEISAKRLFELDATN 311

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 312 SGYYVLL 318


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VD+LGRAG LDDAY FI  MPI PD++IWG+ LNACR++ NV+LGE+AAK +FE D+K+
Sbjct: 642 VVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKS 701

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 702 VGYYILL 708


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VD+LGRAG LDDAY FI  MPI PD++IWG+ LNACR++ NV+LGE+AAK +FE D+K+
Sbjct: 642 VVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKS 701

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 702 VGYYILL 708


>ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
           gi|34394298|dbj|BAC84780.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza
           sativa Japonica Group]
          Length = 673

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD++IWG+ L+ACR++ NV+L E++ K LFELD+ N
Sbjct: 444 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 503

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 504 SGYYVLL 510


>gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD++IWG+ L+ACR++ NV+L E++ K LFELD+ N
Sbjct: 445 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 504

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 505 SGYYVLL 511


>gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD++IWG+ L+ACR++ NV+L E++ K LFELD+ N
Sbjct: 299 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 358

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 359 SGYYVLL 365


>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score = 87.0 bits (214), Expect(2) = 3e-16
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           M+DLLGRAGC D+A   I KMPI PD+ +WGS L+ACR ++N+ LGE  A+HL  L+ +N
Sbjct: 531 MIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQN 590

Query: 382 SVPYVAL 362
             PYV L
Sbjct: 591 PAPYVLL 597



 Score = 23.5 bits (49), Expect(2) = 3e-16
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 357 RWDGMHLATQNMSERKVKKQ 298
           RWD +      M +RKVKK+
Sbjct: 606 RWDDIGSVRNRMKDRKVKKK 625


>gb|AEW07833.1| hypothetical protein 0_12580_02, partial [Pinus radiata]
           gi|383171280|gb|AFG68936.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171281|gb|AFG68937.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171282|gb|AFG68938.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171283|gb|AFG68939.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171284|gb|AFG68940.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171285|gb|AFG68941.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171286|gb|AFG68942.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171287|gb|AFG68943.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171288|gb|AFG68944.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171289|gb|AFG68945.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171290|gb|AFG68946.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171291|gb|AFG68947.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171292|gb|AFG68948.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171293|gb|AFG68949.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171294|gb|AFG68950.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171295|gb|AFG68951.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171296|gb|AFG68952.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
           gi|383171297|gb|AFG68953.1| hypothetical protein
           0_12580_02, partial [Pinus taeda]
          Length = 146

 Score = 87.4 bits (215), Expect(2) = 8e-16
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDL GRAG LD+A  FI KMPI PD+++WG  L ACR+++N++LG+ AA+HLF L  ++
Sbjct: 27  MVDLFGRAGYLDEALDFINKMPIKPDATVWGCLLGACRVHNNIELGKQAAEHLFHLTPRS 86

Query: 382 SVPYVAL 362
           + PYV L
Sbjct: 87  AAPYVLL 93



 Score = 21.9 bits (45), Expect(2) = 8e-16
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
 Frame = -3

Query: 354 WDGMHLATQNMSERKVKKQP--------*TVFAFVAGD 265
           WD +    + M +R VKK P          V AF+ GD
Sbjct: 103 WDEIEKVRKMMRDRDVKKMPGCSWIEVNKQVHAFLVGD 140


>ref|XP_006341663.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Solanum tuberosum]
          Length = 876

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG +DDAY FI+ +P+ PDS+IWG+ LNACR++  V+LGELAA+H+ E D + 
Sbjct: 643 VVDLLGRAGLVDDAYDFILSLPVKPDSAIWGALLNACRIHRQVELGELAARHILETDERG 702

Query: 382 SVPYVAL 362
              YV L
Sbjct: 703 VGYYVLL 709


>ref|XP_006306315.1| hypothetical protein CARUB_v10012185mg [Capsella rubella]
           gi|482575026|gb|EOA39213.1| hypothetical protein
           CARUB_v10012185mg [Capsella rubella]
          Length = 866

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAG L++A+KFI KMP+ PD ++WG+ LNACR++ N+ LGEL+A+ +FELD K+
Sbjct: 639 MVDLLGRAGELEEAHKFIQKMPVTPDPAVWGALLNACRIHRNIDLGELSAQRIFELD-KD 697

Query: 382 SVPYVAL 362
           SV Y  L
Sbjct: 698 SVGYYIL 704


>ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD++IWG+ L+ACR++ NV+L E++AK LFELD+ N
Sbjct: 440 MVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATN 499

Query: 382 SVPYVAL 362
              YV L
Sbjct: 500 CGYYVLL 506


>ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
           gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein
           [Arabidopsis thaliana] gi|300825685|gb|ADK35876.1|
           chloroplast vanilla cream 1 [Arabidopsis thaliana]
           gi|332191210|gb|AEE29331.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 38/67 (56%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           +VDLLGRAG L +A+KFI KMP+ PD ++WG+ LNACR++  + LGEL+A+H+FELD K+
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKS 698

Query: 382 SVPYVAL 362
              Y+ L
Sbjct: 699 VGYYILL 705


>tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 53/67 (79%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD+++WG+ L+ACR+Y NV+L ++ A+ LFELD+ N
Sbjct: 439 MVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATN 498

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 499 SGYYVLL 505


>ref|XP_004956000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X1 [Setaria italica]
           gi|514726520|ref|XP_004956001.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X2 [Setaria italica]
           gi|514726524|ref|XP_004956002.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X3 [Setaria italica]
           gi|514726528|ref|XP_004956003.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X4 [Setaria italica]
           gi|514726532|ref|XP_004956004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X5 [Setaria italica]
          Length = 668

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCLD+AY  I +M + PD+++WG+ L+ACR++ NV+L E AA  LFELD+ N
Sbjct: 439 MVDLLGRAGCLDEAYGLIKEMKVKPDAAMWGALLSACRIHKNVELAETAANRLFELDATN 498

Query: 382 SVPYVAL 362
           S  YV L
Sbjct: 499 SGYYVLL 505


>ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/67 (62%), Positives = 50/67 (74%)
 Frame = -2

Query: 562 MVDLLGRAGCLDDAYKFIMKMPINPDSSIWGSFLNACRMYDNVQLGELAAKHLFELDSKN 383
           MVDLLGRAGCL +AYKFI +MP+ PD  IWG+ L+ACR+Y NV+L EL A HL ELD   
Sbjct: 396 MVDLLGRAGCLLEAYKFIERMPVEPDVGIWGALLSACRIYGNVELAELVAAHLSELDP-- 453

Query: 382 SVPYVAL 362
             PYV +
Sbjct: 454 --PYVLM 458