BLASTX nr result

ID: Ephedra27_contig00021903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021903
         (618 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40327.1| unknown [Picea sitchensis]                              92   4e-20
ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [A...    57   4e-06

>gb|ACN40327.1| unknown [Picea sitchensis]
          Length = 1070

 Score = 92.4 bits (228), Expect(2) = 4e-20
 Identities = 59/127 (46%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = -1

Query: 594  MLRPMSLSASPS*FTP-ISQM*GTTRSPIGSLGIYTPIPPANGGIHATSLGKAAIIGQFN 418
            MLRPMSL ASPS FTP  SQ+  ++ SPIGS G Y P  PA  GIH T LGKAA +GQ++
Sbjct: 630  MLRPMSLGASPSQFTPPSSQIQVSSGSPIGSPGRYGPTSPARSGIHVTGLGKAAAVGQYH 689

Query: 417  K*RGFEIPKNLHGQYQVIVLQPNKSPKKNMIASTNASVSS-SDGANHVGYMSSP*ISQLS 241
            K RGF I  + H   Q  + Q  +  + N+  + +    S  DG    GY  SP  SQ +
Sbjct: 690  KRRGFSISGSSHLSPQDNIPQHWQGHQNNLGVNMDVGAGSFVDGNTRGGYPGSPRNSQAT 749

Query: 240  PHFQASR 220
             H Q SR
Sbjct: 750  SHLQPSR 756



 Score = 32.0 bits (71), Expect(2) = 4e-20
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
 Frame = -2

Query: 218 NGVVVGMSISSTASKSPEIVYSS--------VLEAFLKGIKNNSSLLDPRDWDPNF 75
           NG+     +S+    S   VY S         +E   +G++++SS  DP DWDPN+
Sbjct: 761 NGIATASMVSNHQKNSS--VYGSGLFGESPTAMETCSEGLESSSSPPDPGDWDPNY 814


>ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [Amborella trichopoda]
           gi|548831991|gb|ERM94793.1| hypothetical protein
           AMTR_s00011p00264930 [Amborella trichopoda]
          Length = 963

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -1

Query: 591 LRPMSLSASPS*FTPISQM*GTTRSPIGSLGIYTPIPPANGGIHATSLGKAAIIGQFNK* 412
           +RPMSL  SPS FTP S      +    S G Y P  PA GG+H + LGKAA + Q+N+ 
Sbjct: 612 IRPMSLGVSPSQFTPPSSQMQAMQISACSPGRYGPTSPARGGVHGSPLGKAAAVAQYNRR 671

Query: 411 RGFEIPKNL 385
           R      N+
Sbjct: 672 RSLGYQGNM 680


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