BLASTX nr result
ID: Ephedra27_contig00021844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021844
(818 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668... 168 2e-39
gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 168 2e-39
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab... 166 7e-39
emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] 163 8e-38
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 162 1e-37
ref|XP_004292511.1| PREDICTED: uncharacterized mitochondrial pro... 162 2e-37
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] 161 3e-37
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera] 160 5e-37
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum] 160 7e-37
emb|CAD29539.1| polyprotein [Ogataea angusta] 157 4e-36
gb|EOY14359.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 157 6e-36
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 157 6e-36
gb|AAT38797.2| Polyprotein, putative [Solanum demissum] 155 1e-35
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 155 2e-35
gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis] 155 2e-35
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 155 2e-35
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 154 3e-35
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 154 3e-35
emb|CAN74050.1| hypothetical protein VITISV_040588 [Vitis vinifera] 154 3e-35
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas... 154 3e-35
>ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668041 [Glycine max]
Length = 1176
Score = 168 bits (426), Expect = 2e-39
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 1/268 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDD-EN 640
DLGS +Y+LGI++ + GD +++ Q++Y +L+ + R + P+DP ++ D E
Sbjct: 888 DLGSLKYFLGIEVAQSGDGIVISQKKYALDILEETGMQNCRPVESPMDPNLKLMADQSEA 947
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
D E + L+G LIYLT TR DI F V + ++M++P + IL+YVK G
Sbjct: 948 YPDPERYRRLVGKLIYLTITRPDISFAVGVISQFMQNPHLDHWNAVMRILRYVKRAPGQG 1007
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ Y + + QL G+CDA++ D ++T+ Y V +GGN++SW ++K V S EA Y
Sbjct: 1008 LLYEDKGSTQLSGYCDADWAGCPMDRRSTSGYYVFIGGNLISWKSKKQTVVAWSSAEAEY 1067
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
R++ + E++ Q L++ + + DN+ A+ + NP+FHERTKHIEI HF
Sbjct: 1068 RSMAMVTCELMWIKQFLQELRFCEELQMKLYCDNQAALHIASNPVFHERTKHIEIDCHFI 1127
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
D P D TK+L
Sbjct: 1128 REKLLSKEIVTEFIGSNDQPADILTKSL 1155
>gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1494
Score = 168 bits (425), Expect = 2e-39
Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 1/273 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG +Y+LGI++ + ++L Q +Y+ +L L + P+D + + D
Sbjct: 1072 DLGKLKYFLGIEVARSPSGIVLSQHKYVLDILSECGLMGSKPLSFPIDQQHKLAYDTGPF 1131
Query: 636 -ADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
++ E + L+G L+YLT TR DI +VV L ++M +P + L + +L+Y+K G
Sbjct: 1132 CSNPELYRRLVGHLLYLTITRPDISYVVHLLSQFMHNPRQPHLNAVFRVLRYLKNAPGQG 1191
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ N++ L+ +CDA++V + ++TT YI+ LG + +SW ++K V++S EA Y
Sbjct: 1192 LLLPSNNSLSLRAYCDADWVGCPTTRRSTTGYIIFLGSSPISWQSKKQTVVSRSSAEAEY 1251
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
RA+ + +II ++LL+D + S PVP+ DN+ AI + NP+FHERTKHIEI HF
Sbjct: 1252 RAMATTSSKIIWLIRLLRDLQVPCSNPVPLFCDNQAAIHIAANPVFHERTKHIEIDCHFV 1311
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
+ D FTKALGR+ F
Sbjct: 1312 RQHIQSQTLIPRPITSKFQLADIFTKALGRDRF 1344
>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 166 bits (421), Expect = 7e-39
Identities = 98/270 (36%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNIL----KD 649
DLG +Y+LGI++C+ L L Q +Y LL + + PL+ GY + K+
Sbjct: 1114 DLGELKYFLGIEVCRSNAGLFLSQRKYTLDLLNETGFMDAKPARTPLEDGYKVNRKGEKE 1173
Query: 648 DENKADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIM 469
DE DA + L+G LIYLT TR DI F V + ++MK P IL+Y+K
Sbjct: 1174 DEKFGDAPLYRKLVGKLIYLTNTRPDICFAVNQVSQHMKVPMVYHWNMVERILRYLKGSS 1233
Query: 468 NLGIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITE 289
GI K ++ ++ G+CDA+Y D ++ T Y +GGN+ +W T+K + V+ S E
Sbjct: 1234 GQGIWMGKNSSTEIVGYCDADYAGDRGDRRSKTGYCTFIGGNLATWKTKKQKVVSCSSAE 1293
Query: 288 A*YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQA 109
+ YRA+ L E+ LLKD GIE P+ + DN+ AI + N +FHERTKHIE+
Sbjct: 1294 SEYRAMRKLTNELTWLKALLKDLGIEQHMPITMHCDNKAAIYIASNSVFHERTKHIEVDC 1353
Query: 108 HFXXXXXXXXXXXXXXXXXEDNPTDGFTKA 19
H ED D FTKA
Sbjct: 1354 HKVREKIIEGVTLPCYTRSEDQLADIFTKA 1383
>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
Length = 1355
Score = 163 bits (412), Expect = 8e-38
Identities = 91/272 (33%), Positives = 138/272 (50%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG +Y+LGI++ L L Q +Y LL+ N+ + P D + K +
Sbjct: 1068 DLGPLKYFLGIEVATSRKGLFLNQRKYTIDLLRDSNMLNSKPANTPFDSKLQLDKLGDPL 1127
Query: 636 ADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLGI 457
+ L+G LIYLT TR DI F V + +YM +P+ + L IL+Y+K+ + GI
Sbjct: 1128 DSPNYYQKLVGKLIYLTITRPDISFAVSLVSQYMHAPTVVHLCMVKRILRYLKKTIGRGI 1187
Query: 456 PYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*YR 277
R+ + GF D+++ T D ++TT Y + +GGN++SW ++K V +S EA YR
Sbjct: 1188 VMRRNGHXDIIGFSDSDWAGNTIDRRSTTGYCMFVGGNLVSWKSKKQPVVARSSAEAEYR 1247
Query: 276 AVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFXX 97
A+ + E++ LL D G + P+ + DN+ A+ + NP+FHERTKHIE+ HF
Sbjct: 1248 AMAAASCEMVWLKNLLTDLGFSPTSPMKLFCDNQAAMHIAANPVFHERTKHIEVDCHFIR 1307
Query: 96 XXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
D D FTK L F
Sbjct: 1308 QQVQSKVIQTHYIRSSDQLADAFTKVLSSTVF 1339
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 162 bits (411), Expect = 1e-37
Identities = 88/273 (32%), Positives = 151/273 (55%), Gaps = 1/273 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDD-EN 640
+LG +++LG+++ + + + L Q++Y + LL+ F + + + P++P + + + ++
Sbjct: 1007 ELGQLKHFLGLEVDRTNEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKD 1066
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
DA + L+GSL+YLT T DI + V + RYM++P K L++ IL++VK ++ G
Sbjct: 1067 LKDATMYRQLVGSLLYLTLTXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYG 1126
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ Y+K +L G+CDA+Y +TT Y+ LG +SW +++ TV+ S TEA Y
Sbjct: 1127 LLYKKXEDCKLVGYCDADYAGDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEY 1186
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
RA E + ++L+ D + VP+ DN+ A++L +NP+FH RTKH+E+ HF
Sbjct: 1187 RAAAMATQESMWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFI 1246
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
ED D FTK L + F
Sbjct: 1247 REKVLKEEVELNQIKSEDQVADLFTKGLSGSKF 1279
>ref|XP_004292511.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 291
Score = 162 bits (409), Expect = 2e-37
Identities = 88/267 (32%), Positives = 139/267 (52%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG +Y+LGI+I + +L L Q +Y+ LL + + + PLD + EN
Sbjct: 19 DLGPLKYFLGIEIDQSPHSLFLNQRKYVVDLLDEAGMKDIKPARTPLDSKLKLDITGENL 78
Query: 636 ADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLGI 457
D ++ L+G LIYLT TR D+ + V + +++ SP+ L IL+Y+K ++ GI
Sbjct: 79 TDVCSYQRLVGKLIYLTITRPDLTYAVSLVSQFLHSPTTHHLSIVKRILRYLKGTVSRGI 138
Query: 456 PYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*YR 277
R + ++ G+ D+++ D K+T Y +GGN+++W ++K V +S EA YR
Sbjct: 139 VMRNNSHFKMAGYSDSDWAGNAIDRKSTAGYCTFIGGNLVTWKSKKQTVVARSSAEAEYR 198
Query: 276 AVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFXX 97
A+ E+I LL D G + + +P+ DN+ A+ + NP+FHERTKHIE+ HF
Sbjct: 199 AMASTTCELIWLKSLLADLGFQTTAHIPLHCDNQAAMHIAANPVFHERTKHIEVDCHFVR 258
Query: 96 XXXXXXXXXXXXXXXEDNPTDGFTKAL 16
D D FTK L
Sbjct: 259 NQVQAKLIETVYTRSCDQLADVFTKVL 285
>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
Length = 1012
Score = 161 bits (407), Expect = 3e-37
Identities = 95/270 (35%), Positives = 143/270 (52%), Gaps = 3/270 (1%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG Y+LGI++ + +++L QE Y ++L+ ++K PL + +D NK
Sbjct: 726 DLGDLHYFLGIEVKRGNTSMLLTQERYATEVLKRSGMDKCHPVDTPLCSSEKLSIEDGNK 785
Query: 636 A---DAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMN 466
DA + S++G+L YLT TR DI F V + +++ SP+ I + IL+Y+K
Sbjct: 786 LGSEDATKYCSVVGALQYLTLTRPDISFAVNKVCQFLHSPTTIHWSAVKRILRYIKGTTK 845
Query: 465 LGIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA 286
LGI + K +M + F DA++ D ++T + V LG N++SW +K TV++S TEA
Sbjct: 846 LGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLGNNLISWTAKKQPTVSRSSTEA 905
Query: 285 *YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAH 106
Y+A+ + E+I +LL + G+ + DN GA L NP+FH RTKHIEI H
Sbjct: 906 EYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNLGATYLSANPIFHARTKHIEIDFH 965
Query: 105 FXXXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
F D DGFTKAL
Sbjct: 966 FVRERVAQKLLEVRFISTGDQLADGFTKAL 995
>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
Length = 973
Score = 160 bits (405), Expect = 5e-37
Identities = 87/273 (31%), Positives = 150/273 (54%), Gaps = 1/273 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDD-EN 640
+LG +++LG+++ + + L Q++Y + LL+ F + + + P++P + + + ++
Sbjct: 680 ELGQLKHFLGLEVDCTHEGIFLCQQKYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKD 739
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
DA + L+GSL+YLT TR DI + V + RYM++P K L++ IL++VK ++ G
Sbjct: 740 LKDATMYRQLVGSLVYLTLTRPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYG 799
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ Y+K +L G+CDA+Y ++TT Y+ LG +SW +++ TV+ TEA Y
Sbjct: 800 LLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEY 859
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
RA E ++L+ D + VP+ DN+ A++L +NP+FH RTKH+E+ HF
Sbjct: 860 RAAAMAAQESTWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFI 919
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
+D D FTK L + F
Sbjct: 920 REKVLEEEVELKQIKSKDQVADLFTKGLSGSKF 952
>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1140
Score = 160 bits (404), Expect = 7e-37
Identities = 91/273 (33%), Positives = 149/273 (54%), Gaps = 1/273 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG Y+LG+++ + + + Q++Y ++L+ F L+K + P G ++K+DE+
Sbjct: 850 DLGKMTYFLGMEVNQSSQGIFVSQKKYATEILKKFCLDKCKPVSTPAVQGEKLMKEDESG 909
Query: 636 -ADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
DA + SLIGSL+YL+ TR DI + L R+M P+K LK+A IL+Y++ ++ G
Sbjct: 910 LVDASIYRSLIGSLLYLSATRPDIMYATSVLSRFMHLPTKTHLKAAKRILRYIRGTIDYG 969
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ Y++ +M+L GF D+++ D K+T+ Y LG ++ W T+K +V +S EA Y
Sbjct: 970 VFYKRTTSMKLLGFTDSDWAGSQDDMKSTSGYCFTLGSGVICWCTKKQGSVAQSTAEAEY 1029
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
A + + ++L D G S + DN+ + ++KNP+FH RTKHI+I+ H
Sbjct: 1030 VAASGAVNQALWLRKILIDLGFHPSKATEVLCDNKSVVAMVKNPVFHGRTKHIKIKYHSI 1089
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
ED D FTKAL + F
Sbjct: 1090 REAERENEVHILYCCGEDQLADIFTKALQKQRF 1122
>emb|CAD29539.1| polyprotein [Ogataea angusta]
Length = 1417
Score = 157 bits (397), Expect = 4e-36
Identities = 94/270 (34%), Positives = 145/270 (53%), Gaps = 1/270 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG+A ++LG+ I + ++ L YI ++L +NL+ P D +L DD
Sbjct: 1133 DLGTASHFLGLDIHQSLPSIALSASTYIHQMLDDYNLSACNPVSTPCDTQSWVLSDDPPL 1192
Query: 636 ADAENFWSLIGSLIYLTYT-RLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
++ F S++G L++ T R+DI FVV L R++++P K L A +++Y+K +LG
Sbjct: 1193 SNPTEFRSMVGKLLFAANTVRIDIAFVVSKLSRFLQNPRKSHLAKARHVMRYLKGTADLG 1252
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
I Y K + +L GFCD+++ +D + T Y+ L G ++W ++K TV S TEA Y
Sbjct: 1253 IVYSKDSHFKLSGFCDSDWGTDPNDRISVTGYVFILAGAPITWRSKKQTTVALSSTEAEY 1312
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
A+GD E++ QLL I+ S P + DN GA+ L+K+P FH RTKHI+I+ HF
Sbjct: 1313 MALGDALRELLWLKQLLDQLEIKSSEPPTLYCDNTGALSLMKHPAFHPRTKHIDIRHHFI 1372
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGR 10
N D TKAL +
Sbjct: 1373 RQHLTSNDFISKHVSSGMNLADPLTKALDK 1402
>gb|EOY14359.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative
[Theobroma cacao]
Length = 442
Score = 157 bits (396), Expect = 6e-36
Identities = 86/240 (35%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILK--DDE 643
DLG +Y+LG+++ + + + Q +Y LL + + + P+D + + K D +
Sbjct: 183 DLGKLKYFLGLEVAQSEAGISICQRKYAFDLLAEYGVLGCKPITTPIDYNHRLNKATDTD 242
Query: 642 NKADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNL 463
A+A N+ L+G L+YLT++R DI + V L +YM P++ L +A +L+Y+K
Sbjct: 243 QLANATNYRQLVGKLLYLTFSRPDISYAVHILSQYMDKPTQSHLHAAFRVLKYIKGAPGK 302
Query: 462 GIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA* 283
GI R+++QLK + D+++ ++ T + V LG +++SW ++K V +S TEA
Sbjct: 303 GILLSSRSSLQLKAYSDSDWGGYPDTRRSVTGFCVFLGDSLISWKSKKQMVVARSSTEAK 362
Query: 282 YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHF 103
YRA+ E+I L LLKD GI V + DN+ A+ L KNP+FHERTKHI+I HF
Sbjct: 363 YRAMAATTCEVIWLLCLLKDLGINHMQAVSLHCDNQFALHLCKNPIFHERTKHIKIDCHF 422
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 157 bits (396), Expect = 6e-36
Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 3/270 (1%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG Y+LGI++ K ++L QE Y ++++ ++ + PL + + K
Sbjct: 765 DLGELHYFLGIEVKKASGNILLNQERYASEIVKRVSMENCKSVGTPLSTVEKLSAYEGEK 824
Query: 636 A---DAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMN 466
DA + S++G+L YLT TR DI F V + +++++P+ + + IL+YVK +
Sbjct: 825 LGEKDATQYRSVVGALQYLTLTRPDISFSVNKVCQFLQNPTTVHWATVKRILRYVKGTLG 884
Query: 465 LGIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA 286
LG+ K ++ + + DA++ D D ++T + V LG N++SW +K TV++S TEA
Sbjct: 885 LGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNLISWNARKQATVSRSSTEA 944
Query: 285 *YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAH 106
Y+A+ + EI+ +LL++ GI GP + DN GA L NP+FH RTKHIEI H
Sbjct: 945 EYKALANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYLSVNPVFHARTKHIEIDYH 1004
Query: 105 FXXXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
F +D DGFTKAL
Sbjct: 1005 FVREQVAQKQLALQFVPSQDQVADGFTKAL 1034
>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 155 bits (393), Expect = 1e-35
Identities = 94/275 (34%), Positives = 140/275 (50%), Gaps = 3/275 (1%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKD-DEN 640
DLG +Y+LG+++ + D + + Q++YI +L F + + P+ G + KD D
Sbjct: 1063 DLGVMKYFLGMEVLQSSDGIFICQQKYILDILNRFKMQDCKPVSTPISTGVKLGKDEDSK 1122
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
K D + SLIG+L+YLT +RLDI FVV L R+M SP +A +L+Y+K G
Sbjct: 1123 KVDDSMYRSLIGNLLYLTASRLDILFVVSLLSRFMHSPRDTHFTTAKRVLRYIKGTSKFG 1182
Query: 459 --IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA 286
P TM L G+ D+++ D + T+ Y+ LG + SW ++K T + I EA
Sbjct: 1183 TFFPTSAEVTMNLIGYSDSDWGGGVDDSRITSGYLFCLGTSWFSWSSRKQETTAQPIVEA 1242
Query: 285 *YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAH 106
Y A + I +LKD G E + I DN A+ + KNP+FH RTKHI+I+ H
Sbjct: 1243 EYIAAASTVNQAIWLRNMLKDLGYEQTKATKIMCDNSSAVSISKNPVFHGRTKHIKIKFH 1302
Query: 105 FXXXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
F E+ D FTK+L + F
Sbjct: 1303 FIREVQQSNEVLLVHCSSENQLADIFTKSLPKERF 1337
Score = 76.3 bits (186), Expect = 1e-11
Identities = 51/182 (28%), Positives = 91/182 (50%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DL + Y+LGI++ + D +++ Q Y R +L+ N+ + K P+ +LK E
Sbjct: 1606 DLEALTYFLGIEVIRSVDGIIMTQSTYKRDILREENMADCKLAKTPMSTT-EVLKIHEGD 1664
Query: 636 ADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLGI 457
+A F ++ + + IY + SKI K +L+Y++ +LG+
Sbjct: 1665 REAPIFVFHSSRHLFCSKQTVTIY----------ANSSKIHWKIVKRVLRYLQGTAHLGL 1714
Query: 456 PYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*YR 277
+ N L + DA++V +D +T Y++ +G N +SW ++K RT+ +S EA YR
Sbjct: 1715 RLMRHNDFSLHMYSDADWVGDVNDRASTIGYLLFIGQNPVSWSSKKQRTIARSSIEAEYR 1774
Query: 276 AV 271
AV
Sbjct: 1775 AV 1776
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 155 bits (392), Expect = 2e-35
Identities = 89/273 (32%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDD-EN 640
DLG +Y+LGI+ + + + Q +Y +LQ L + K P++ + +D E
Sbjct: 1441 DLGELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGEL 1500
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
D + L+G LIYLT TR DI + V L ++M +P K ++A +L+Y+K G
Sbjct: 1501 LHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQG 1560
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ N + L FCD+++ ++ + Y V LG +++SW ++K V++S EA Y
Sbjct: 1561 LFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEY 1620
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
RA+ + E+ +LKD +E+ P P+ DN+ A+ + NP+FHERTKHIEI H
Sbjct: 1621 RAMANTCLELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIV 1680
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKALGRN*F 1
+ D FTKALGR F
Sbjct: 1681 REKLQAGVIRPCYVSTKMQLADVFTKALGREQF 1713
>gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]
Length = 1545
Score = 155 bits (391), Expect = 2e-35
Identities = 84/242 (34%), Positives = 137/242 (56%), Gaps = 5/242 (2%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNI-----LK 652
DLG +Y+LGI++C+ + L + Q +YI LL+ G+ K P++ GY L+
Sbjct: 1230 DLGEMKYFLGIELCRSEEGLFISQRKYILDLLKEAGAYGGKTAKMPMEDGYKAPREGELE 1289
Query: 651 DDENKADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEI 472
D + D + + L+G LIYLT TR DI F V + ++M++P + + +L Y+
Sbjct: 1290 DSKVFHDPKLYRKLVGKLIYLTITRPDICFAVNQVSQHMQAPREHHWRMVERVLMYLNGT 1349
Query: 471 MNLGIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSIT 292
LGI + + G+CDA++ +D ++TT Y +GGN+++W ++K + V+ S
Sbjct: 1350 QGLGIWMGCNGSTEAVGYCDADWAGDRTDRRSTTGYCTFIGGNMVTWKSKKQKVVSCSSA 1409
Query: 291 EA*YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQ 112
EA YRA+ L E++ +LK IE + P+ + DN+ AI + N +FHERTKHIE+
Sbjct: 1410 EAEYRAMLKLTNELVWIKGILKHLEIEQATPMTMHCDNQAAIHIATNSVFHERTKHIEVD 1469
Query: 111 AH 106
H
Sbjct: 1470 CH 1471
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 155 bits (391), Expect = 2e-35
Identities = 91/270 (33%), Positives = 139/270 (51%), Gaps = 3/270 (1%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPG---YNILKDD 646
DLG Y+LG+++ + + L QE+Y KL+ F + + + PL P + DD
Sbjct: 1059 DLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDD 1118
Query: 645 ENKADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMN 466
+ AD + ++G L+YL +R D+ + YL RYM SPS + A +L+YVK N
Sbjct: 1119 KEFADPTKYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSN 1178
Query: 465 LGIPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA 286
G+ + + T +L G+ D+++ D K+TT Y+ LG + W + K +TV +S EA
Sbjct: 1179 FGVLFTSKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEA 1238
Query: 285 *YRAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAH 106
Y AV + I +L +D G++ +PI DN+ AI + +NP+ H RTKHIEI+ H
Sbjct: 1239 EYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYH 1298
Query: 105 FXXXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
F ED D TKAL
Sbjct: 1299 FVREAEHKGLIQLEYCKGEDQLADVLTKAL 1328
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 154 bits (390), Expect = 3e-35
Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 1/268 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDD-EN 640
DLG RY+LGI++ + +++ Q +Y +L+ L + P+DP +L + E
Sbjct: 1099 DLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLMNSKSVDTPMDPNVKLLPNQGEP 1158
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
+D E + L+G L YLT TR DI F V + +++ SP + + IL+Y+K G
Sbjct: 1159 LSDPEKYRRLVGKLNYLTVTRPDISFAVSVVSQFLNSPCEDHWNAVIRILKYIKGSPGKG 1218
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
+ Y N ++ + DA++ SD ++T+ Y V +G N++SW ++K V +S EA Y
Sbjct: 1219 LLYGHNNHTKVVCYSDADWAGSPSDRRSTSGYCVSIGDNLISWKSKKQSVVARSSAEAEY 1278
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
RA+ E+I QLLK+ + + DN+ A+ + NP+FHERTKHIEI HF
Sbjct: 1279 RAMASATCELIWLKQLLKELQFGDVTQMTLICDNQAALHISSNPVFHERTKHIEIDCHFI 1338
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
+ D FTK+L
Sbjct: 1339 REKIISGDIKTEFVNSNNQLADIFTKSL 1366
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 154 bits (390), Expect = 3e-35
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 1/267 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
D+G Y+LGI++ + +++ Q++Y LL+ F + P+D + KDD +
Sbjct: 997 DMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDANLKLCKDDIGE 1056
Query: 636 A-DAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
A D + SL+GSL+YLT TR DI FVV L R+M +P + ++ +L+Y+ +N G
Sbjct: 1057 AVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFG 1116
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
I Y+K + L GFCD+++ D ++T+ Y+ +G + SW ++K VT S TEA Y
Sbjct: 1117 IYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQSVVTLSTTEAEY 1176
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
++ + + +LK+ + DN AI L KNP+FH R+KHI I+ HF
Sbjct: 1177 ISLAAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFI 1236
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKA 19
+D D FTKA
Sbjct: 1237 KDLVKDGEVIVKYCKTQDQVADIFTKA 1263
>emb|CAN74050.1| hypothetical protein VITISV_040588 [Vitis vinifera]
Length = 1067
Score = 154 bits (390), Expect = 3e-35
Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 1/239 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILKDDENK 637
DLG R++LGI++ +K D + + Q Y ++L+ F + + P+ PG+ + +DD+
Sbjct: 779 DLGRMRFFLGIEVLQKSDGIFICQRRYDTEVLKHFGMFDSKPVSSPIVPGFKMSRDDDGV 838
Query: 636 A-DAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
A + NF ++GSL+YLT TR DI F V + RYM P+++ L+ IL+Y+K N G
Sbjct: 839 AVNTTNFKQMVGSLMYLTTTRPDIMFSVSLISRYMAKPTELHLQVTKRILRYLKGTTNYG 898
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
I Y+K +L F D++Y D K+T+ Y+ L ++SW+++K VT S TEA +
Sbjct: 899 ILYKKGGEEELLAFTDSDYASDIDDRKSTSGYVFLLSSGVISWLSKKQPIVTLSTTEAEF 958
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHF 103
A + I ++LK E G I DN IKL +N + H R+KHI+++ F
Sbjct: 959 VAATVCACQAIWMRKVLKKLSHEQKGCTAIMCDNNSTIKLSRNQVMHGRSKHIDVRFQF 1017
>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
x hybrida]
Length = 389
Score = 154 bits (390), Expect = 3e-35
Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
Frame = -3
Query: 816 DLGSARYYLGIKICKKGDALMLYQEEYIRKLLQTFNLNKGRGRKKPLDPGYNILK-DDEN 640
DLG Y+LG++I + D L++ Q ++ LL ++ R PLDP + E
Sbjct: 98 DLGEVSYFLGMEILHEPDGLIVTQRKFAMDLLSEYSSLSPRTVTTPLDPSLKLSSISGEL 157
Query: 639 KADAENFWSLIGSLIYLTYTRLDIYFVVCYLLRYMKSPSKIQLKSATTILQYVKEIMNLG 460
D + L+G L YLT+TR DI F V L ++M+SP L++A L+Y++ LG
Sbjct: 158 LQDPTFYRRLVGKLNYLTHTRPDISFAVQTLSQHMQSPRSGHLEAAYHTLRYIRNNPGLG 217
Query: 459 IPYRKRNTMQLKGFCDANYVDKTSDGKATT*YIVKLGGNILSWVTQK*RTVTKSITEA*Y 280
I + QL GFCDA++ ++ + + + +GG LSW ++K + V+ S EA Y
Sbjct: 218 IFLSSEQSFQLTGFCDADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVSLSSAEAEY 277
Query: 279 RAVGDLNFEII*FLQLLKDCGIEISGPVPISSDNEGAIKLLKNPMFHERTKHIEIQAHFX 100
R++ L EI ++LL D ++ S PV + DN+ AI + KNP+FHERTKHIE+ HF
Sbjct: 278 RSLRRLVAEIAWIVRLLHDLSVDFSLPVSVHCDNQSAIHIAKNPVFHERTKHIELDCHFV 337
Query: 99 XXXXXXXXXXXXXXXXEDNPTDGFTKAL 16
D FTK+L
Sbjct: 338 REKLLDGLISLSFVPSSSQIADIFTKSL 365