BLASTX nr result
ID: Ephedra27_contig00021735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00021735 (479 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu... 58 1e-06 gb|EOY08735.1| Transcription elongation factor family protein, p... 58 2e-06 gb|EOY08734.1| Transcription elongation factor family protein, p... 58 2e-06 gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays] 56 4e-06 ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu... 56 6e-06 >ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa] gi|222867860|gb|EEF04991.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa] Length = 474 Score = 58.2 bits (139), Expect = 1e-06 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 3/89 (3%) Frame = +2 Query: 59 ATTVERTSQGQNESVN---CDFEEGLPSVPLDEGAFLSTAVSTQDIAELFETLDEDGNIV 229 A V R ++G +SVN D EEGLPS PLDEGAF +T ++ ++++ F+ +D+DGN Sbjct: 243 AANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGN-- 300 Query: 230 SSRNKVEYDDTKKPARVKHHSSQNDNMGR 316 RN E+ K + S++N N+ + Sbjct: 301 -PRNNGEF--IKNHVSRRRPSAENQNISK 326 >gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2 [Theobroma cacao] Length = 324 Score = 57.8 bits (138), Expect = 2e-06 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 47/206 (22%) Frame = +2 Query: 2 DEWVENGQQV----PISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTA 169 DEWV + + P S N + + E+ + + E EEGLPS PLD GAF +T Sbjct: 77 DEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEE-----EEGLPSPPLDVGAFFATQ 131 Query: 170 VSTQDIAELFETLDEDGNIVSSRNKVEY----DDTKKPARVKHHSS-------------- 295 ++ ++++ F+ +D+DGN RN E+ D+ +KP++ + S Sbjct: 132 PTSMELSQFFDGMDDDGN---PRNSGEFIKNLDNRRKPSQENQNVSKRKQQTSSEAVLLT 188 Query: 296 ---------------------QNDNM--GRPIYHDRHQXXXXXXXXXXYEHRVLNRSKPT 406 Q NM GRP HD Q ++ KP Sbjct: 189 KDDKSRQMKRQEPVDNPNNKPQRKNMGSGRPPKHDMEQKANFESKLLLKSDKMAVPKKPL 248 Query: 407 MSNY-KFGSQRE-TEQRKFEASKRRI 478 S KF + + QRK EA+KR++ Sbjct: 249 SSQQDKFKTSDDIAVQRKLEATKRKL 274 >gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1 [Theobroma cacao] Length = 464 Score = 57.8 bits (138), Expect = 2e-06 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 47/206 (22%) Frame = +2 Query: 2 DEWVENGQQV----PISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTA 169 DEWV + + P S N + + E+ + + E EEGLPS PLD GAF +T Sbjct: 217 DEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEE-----EEGLPSPPLDVGAFFATQ 271 Query: 170 VSTQDIAELFETLDEDGNIVSSRNKVEY----DDTKKPARVKHHSS-------------- 295 ++ ++++ F+ +D+DGN RN E+ D+ +KP++ + S Sbjct: 272 PTSMELSQFFDGMDDDGN---PRNSGEFIKNLDNRRKPSQENQNVSKRKQQTSSEAVLLT 328 Query: 296 ---------------------QNDNM--GRPIYHDRHQXXXXXXXXXXYEHRVLNRSKPT 406 Q NM GRP HD Q ++ KP Sbjct: 329 KDDKSRQMKRQEPVDNPNNKPQRKNMGSGRPPKHDMEQKANFESKLLLKSDKMAVPKKPL 388 Query: 407 MSNY-KFGSQRE-TEQRKFEASKRRI 478 S KF + + QRK EA+KR++ Sbjct: 389 SSQQDKFKTSDDIAVQRKLEATKRKL 414 >gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays] Length = 535 Score = 56.2 bits (134), Expect = 4e-06 Identities = 31/80 (38%), Positives = 42/80 (52%) Frame = +2 Query: 2 DEWVENGQQVPISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTAVSTQ 181 DEWV A E + N SV + EEGLPS PLDEGAF +T ++ Sbjct: 257 DEWVSTTN-----------AALTENSPGSSNPSVVDEEEEGLPSPPLDEGAFFATQTTSI 305 Query: 182 DIAELFETLDEDGNIVSSRN 241 ++E F+ +DEDGN+ S + Sbjct: 306 QLSEFFDEMDEDGNLRHSND 325 >ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa] gi|550320725|gb|EEF04988.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa] Length = 480 Score = 55.8 bits (133), Expect = 6e-06 Identities = 35/105 (33%), Positives = 54/105 (51%) Frame = +2 Query: 2 DEWVENGQQVPISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTAVSTQ 181 DEW + + + E T N SV D EEGLPS PLDEGAF +T ++ Sbjct: 238 DEWYSAANVI----RGRNLLASNEGTPDSVNPSV-VDEEEGLPSPPLDEGAFFATQPTSM 292 Query: 182 DIAELFETLDEDGNIVSSRNKVEYDDTKKPARVKHHSSQNDNMGR 316 ++++ F+ +D+DGN RN E+ K + S++N N+ + Sbjct: 293 ELSQFFDGMDDDGN---PRNNGEF--IKNHVSRRRPSAENQNISK 332