BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021735
         (479 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...    58   1e-06
gb|EOY08735.1| Transcription elongation factor family protein, p...    58   2e-06
gb|EOY08734.1| Transcription elongation factor family protein, p...    58   2e-06
gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays]         56   4e-06
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...    56   6e-06

>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|222867860|gb|EEF04991.1| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = +2

Query: 59  ATTVERTSQGQNESVN---CDFEEGLPSVPLDEGAFLSTAVSTQDIAELFETLDEDGNIV 229
           A  V R ++G  +SVN    D EEGLPS PLDEGAF +T  ++ ++++ F+ +D+DGN  
Sbjct: 243 AANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGN-- 300

Query: 230 SSRNKVEYDDTKKPARVKHHSSQNDNMGR 316
             RN  E+   K     +  S++N N+ +
Sbjct: 301 -PRNNGEF--IKNHVSRRRPSAENQNISK 326


>gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2
           [Theobroma cacao]
          Length = 324

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 47/206 (22%)
 Frame = +2

Query: 2   DEWVENGQQV----PISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTA 169
           DEWV   + +    P S N + +    E+  + + E      EEGLPS PLD GAF +T 
Sbjct: 77  DEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEE-----EEGLPSPPLDVGAFFATQ 131

Query: 170 VSTQDIAELFETLDEDGNIVSSRNKVEY----DDTKKPARVKHHSS-------------- 295
            ++ ++++ F+ +D+DGN    RN  E+    D+ +KP++   + S              
Sbjct: 132 PTSMELSQFFDGMDDDGN---PRNSGEFIKNLDNRRKPSQENQNVSKRKQQTSSEAVLLT 188

Query: 296 ---------------------QNDNM--GRPIYHDRHQXXXXXXXXXXYEHRVLNRSKPT 406
                                Q  NM  GRP  HD  Q             ++    KP 
Sbjct: 189 KDDKSRQMKRQEPVDNPNNKPQRKNMGSGRPPKHDMEQKANFESKLLLKSDKMAVPKKPL 248

Query: 407 MSNY-KFGSQRE-TEQRKFEASKRRI 478
            S   KF +  +   QRK EA+KR++
Sbjct: 249 SSQQDKFKTSDDIAVQRKLEATKRKL 274


>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
           [Theobroma cacao]
          Length = 464

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 47/206 (22%)
 Frame = +2

Query: 2   DEWVENGQQV----PISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTA 169
           DEWV   + +    P S N + +    E+  + + E      EEGLPS PLD GAF +T 
Sbjct: 217 DEWVNAAKAIAEGTPESVNPSVLDNEEEKEEEEEEEE-----EEGLPSPPLDVGAFFATQ 271

Query: 170 VSTQDIAELFETLDEDGNIVSSRNKVEY----DDTKKPARVKHHSS-------------- 295
            ++ ++++ F+ +D+DGN    RN  E+    D+ +KP++   + S              
Sbjct: 272 PTSMELSQFFDGMDDDGN---PRNSGEFIKNLDNRRKPSQENQNVSKRKQQTSSEAVLLT 328

Query: 296 ---------------------QNDNM--GRPIYHDRHQXXXXXXXXXXYEHRVLNRSKPT 406
                                Q  NM  GRP  HD  Q             ++    KP 
Sbjct: 329 KDDKSRQMKRQEPVDNPNNKPQRKNMGSGRPPKHDMEQKANFESKLLLKSDKMAVPKKPL 388

Query: 407 MSNY-KFGSQRE-TEQRKFEASKRRI 478
            S   KF +  +   QRK EA+KR++
Sbjct: 389 SSQQDKFKTSDDIAVQRKLEATKRKL 414


>gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays]
          Length = 535

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/80 (38%), Positives = 42/80 (52%)
 Frame = +2

Query: 2   DEWVENGQQVPISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTAVSTQ 181
           DEWV               A   E +    N SV  + EEGLPS PLDEGAF +T  ++ 
Sbjct: 257 DEWVSTTN-----------AALTENSPGSSNPSVVDEEEEGLPSPPLDEGAFFATQTTSI 305

Query: 182 DIAELFETLDEDGNIVSSRN 241
            ++E F+ +DEDGN+  S +
Sbjct: 306 QLSEFFDEMDEDGNLRHSND 325


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|550320725|gb|EEF04988.2| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/105 (33%), Positives = 54/105 (51%)
 Frame = +2

Query: 2   DEWVENGQQVPISQNANEIATTVERTSQGQNESVNCDFEEGLPSVPLDEGAFLSTAVSTQ 181
           DEW      +        +  + E T    N SV  D EEGLPS PLDEGAF +T  ++ 
Sbjct: 238 DEWYSAANVI----RGRNLLASNEGTPDSVNPSV-VDEEEGLPSPPLDEGAFFATQPTSM 292

Query: 182 DIAELFETLDEDGNIVSSRNKVEYDDTKKPARVKHHSSQNDNMGR 316
           ++++ F+ +D+DGN    RN  E+   K     +  S++N N+ +
Sbjct: 293 ELSQFFDGMDDDGN---PRNNGEF--IKNHVSRRRPSAENQNISK 332