BLASTX nr result
ID: Ephedra27_contig00021733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021733
(673 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16456.1| unknown [Picea sitchensis] 163 4e-38
gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis] 148 1e-33
ref|XP_006832827.1| hypothetical protein AMTR_s00095p00020800, p... 148 1e-33
ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [A... 147 3e-33
ref|XP_006832830.1| hypothetical protein AMTR_s00095p00027730 [A... 147 4e-33
ref|XP_002522167.1| pentatricopeptide repeat-containing protein,... 147 4e-33
emb|CBI30135.3| unnamed protein product [Vitis vinifera] 145 1e-32
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi... 145 1e-32
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu... 144 2e-32
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi... 143 6e-32
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi... 142 9e-32
gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo... 139 6e-31
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo... 139 6e-31
ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Caps... 139 1e-30
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs... 138 1e-30
ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containi... 138 2e-30
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi... 138 2e-30
gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana] 137 2e-30
tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea m... 137 2e-30
ref|NP_173001.2| pentatricopeptide repeat-containing protein [Ar... 137 2e-30
>gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 163 bits (413), Expect = 4e-38
Identities = 87/224 (38%), Positives = 140/224 (62%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E V S+ + +R ++ LL YA L + +V+R WK+ E+ +
Sbjct: 349 GLAEKAEVVLKELENV--SLKD----KRSRLKMLLPLYAELGKPTEVERIWKDFEAFPAL 402
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ +Y +G+ AWG LG I+KAE FE+LL +LS HY+ALL VYA+H+L K + L+
Sbjct: 403 RLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELV 462
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ NG + I L++L+VN G+L+KA+S+L + + +L+P Y +++ +L+KYAE
Sbjct: 463 KRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILFKACNQKQLRPKYWTMVTILEKYAE 522
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ A+KIF R+ GY + +L+K++ A +PAYG +
Sbjct: 523 RGDVANAEKIFDRMRQAGYTGSAGAFASLLKSYANARVPAYGFR 566
>gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]
Length = 623
Score = 148 bits (374), Expect = 1e-33
Identities = 84/224 (37%), Positives = 132/224 (58%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E +++NE RR+ LL YA L +V+R WK ES+
Sbjct: 374 GLKEKAEAVLKEMEG--DNLNEDPKVRRY----LLLLYAELGHADEVERVWKACESNPRT 427
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
++++ I AWG L + KAE FE++L+ + S HY+ALL VYANH + ++ ++L+
Sbjct: 428 --SEFLAAIEAWGKLKKVKKAEDAFEKMLKAVKKPSAVHYNALLRVYANHKMLTRGKDLI 485
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ MA+N K RM +VKLYV G+++KA+SVL + +LKP Y S + ++ +YA+
Sbjct: 486 KRMAENDGKISRMTLDSVVKLYVEAGEIEKADSVLQKATQQNQLKPLYVSYMAIMDEYAK 545
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GDI +K+F ++ GY + ALI+ ++ A PAYG++
Sbjct: 546 KGDIHNTEKMFLRMKQAGYDARFRQFQALIQAYVNAKTPAYGIR 589
>ref|XP_006832827.1| hypothetical protein AMTR_s00095p00020800, partial [Amborella
trichopoda] gi|548837327|gb|ERM98105.1| hypothetical
protein AMTR_s00095p00020800, partial [Amborella
trichopoda]
Length = 425
Score = 148 bits (374), Expect = 1e-33
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 10/234 (4%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G I KAE L + E E R R + LL YA L + +V R WK +E +
Sbjct: 166 GFIDKAEAVLKDLE------GEDIERNRDACKALLPLYAALGKADEVSRIWKVVEPSPRL 219
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
++ ++ I AWG LG+ +KAE +FER+L+ +S +YSAL++VY H +K ++L+
Sbjct: 220 --EECLAVIEAWGKLGDTEKAEAVFERMLKTWKNISSRYYSALIKVYTTHKQLNKGKDLV 277
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSE----------DYDGTKLKPTYKS 163
+ MA NG+ + LV+LYV G+++KA+S+L++ +LKP Y S
Sbjct: 278 KRMADNGITIGPVTWDALVRLYVEAGEVEKADSILAKAAAQQNNSTSQSSKNRLKPLYSS 337
Query: 162 LLLVLQKYAEIGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
+++++KY E GDI A+KIF R+ GY+ + Y L++T++ AN PAYG +
Sbjct: 338 YMVIMEKYCERGDIHNAEKIFHRLRQAGYEGRMSDYQTLLQTYVNANTPAYGFR 391
>ref|XP_006832826.1| hypothetical protein AMTR_s00095p00019470 [Amborella trichopoda]
gi|548837326|gb|ERM98104.1| hypothetical protein
AMTR_s00095p00019470 [Amborella trichopoda]
Length = 637
Score = 147 bits (371), Expect = 3e-33
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G I KAE L + E E R R + LL YA L + +V R WK +E
Sbjct: 378 GFIDKAEAVLKDLE------GEDMERNRDACKALLPLYAALGKADEVSRIWKVVEPSPRF 431
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I AWG LG+ +KAE +FER+L+ +S +YSAL++VY H +K ++L+
Sbjct: 432 D--ECLAAIEAWGKLGDTEKAEAVFERMLKTWKNISSRYYSALIKVYTTHKQLNKGKDLV 489
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSE----------DYDGTKLKPTYKS 163
+ MA NG+ + LV+LYV G+++KA+S+L++ +LKP Y S
Sbjct: 490 KRMADNGITIGPVTWDALVRLYVEAGEVEKADSILAKAAAQQNNSTSQSSKNRLKPLYSS 549
Query: 162 LLLVLQKYAEIGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
+++++KY E GDI A+KIF ++ GY+ + Y L++T++ AN PAYG +
Sbjct: 550 YMVIMEKYCERGDIHNAEKIFHRLKQAGYEGRMSDYQTLLQTYVNANTPAYGFR 603
>ref|XP_006832830.1| hypothetical protein AMTR_s00095p00027730 [Amborella trichopoda]
gi|548837330|gb|ERM98108.1| hypothetical protein
AMTR_s00095p00027730 [Amborella trichopoda]
Length = 443
Score = 147 bits (370), Expect = 4e-33
Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G I KAE L + E E R R + LL YA L + +V R WK +E +
Sbjct: 184 GFIDKAEAVLKDLE------GEDIERNRDACKALLPLYAALGKADEVSRIWKVVEPSPRL 237
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I AWG LG+ +KAE +FER+L+ +S +YSAL++VY H +K ++L+
Sbjct: 238 D--ECLAVIEAWGKLGDTEKAEAVFERMLKTWKNISSRYYSALIKVYTTHKQLNKGKDLV 295
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSE----------DYDGTKLKPTYKS 163
+ MA NG+ + LV+LYV G+++KA+S+L++ +LKP Y S
Sbjct: 296 KRMADNGITIGPVTWDALVRLYVEAGEVEKADSILAKAAAQQNNWTSQSSKNRLKPLYSS 355
Query: 162 LLLVLQKYAEIGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
+++++KY E GDI A+KIF R+ GY + Y L++T++ AN PAYG +
Sbjct: 356 YMVIMEKYCERGDIHNAEKIFHRLRQAGYVGRMSHYQTLLQTYVNANTPAYGFR 409
>ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538605|gb|EEF40208.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 342
Score = 147 bits (370), Expect = 4e-33
Identities = 84/224 (37%), Positives = 134/224 (59%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E ++ E R R LL YA L + +V+R WK ES ++
Sbjct: 93 GLKEKAEAILKEMEG--GNLEE----HRWACRLLLPLYAALGKADEVERVWKVCESSPQL 146
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
++ ++ I AWG L IDKAE +F R+L +LS HYSALL+VYA+H + + ++L+
Sbjct: 147 --EECVAVIEAWGKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLI 204
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ MA +G + + LVKLYV G+++KA+SVL + +KP + S ++++ +YA+
Sbjct: 205 KKMADSGCRIGPLTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAK 264
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ A+K+F R+ GY + + AL++T+I A PAYG++
Sbjct: 265 RGDVHNAEKMFHRMRQAGYVARLRQFQALVQTYINAKAPAYGIR 308
>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 145 bits (365), Expect = 1e-32
Identities = 79/224 (35%), Positives = 134/224 (59%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E ++ E R + R LL PYA L + DV+R WK ES+ +
Sbjct: 375 GLKEKAEAILKEMEG--GNLKE----NRWVCRVLLPPYAALGKADDVERIWKVCESNPRL 428
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
P ++++ I A+G L +++AE IF ++ + RLS HYSALL+VYA+H + K ++L+
Sbjct: 429 P--EFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLV 486
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ +G + + LVKLYV G+++KA+ +L + + +KP + + + ++ +YA+
Sbjct: 487 KQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAK 546
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GDI ++K+F R+ GY + + LI+ ++ A PAYG+K
Sbjct: 547 RGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIK 590
>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 145 bits (365), Expect = 1e-32
Identities = 79/224 (35%), Positives = 134/224 (59%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E ++ E R + R LL PYA L + DV+R WK ES+ +
Sbjct: 338 GLKEKAEAILKEMEG--GNLKE----NRWVCRVLLPPYAALGKADDVERIWKVCESNPRL 391
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
P ++++ I A+G L +++AE IF ++ + RLS HYSALL+VYA+H + K ++L+
Sbjct: 392 P--EFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLV 449
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ +G + + LVKLYV G+++KA+ +L + + +KP + + + ++ +YA+
Sbjct: 450 KQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAK 509
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GDI ++K+F R+ GY + + LI+ ++ A PAYG+K
Sbjct: 510 RGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIK 553
>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
gi|550335400|gb|EEE92411.2| hypothetical protein
POPTR_0006s03790g [Populus trichocarpa]
Length = 623
Score = 144 bits (364), Expect = 2e-32
Identities = 83/224 (37%), Positives = 128/224 (57%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E ++ E R R +L Y L + +V R WK E +
Sbjct: 374 GLKEKAEAILKEMEG--GNLEE----HRWACRFMLPLYGALGKADEVSRVWKFCEKSPRL 427
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ M+ I AWG L ID+AE +FE + + +LS HYS LL+VYANH + SK ++L+
Sbjct: 428 D--ECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLI 485
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M +G + + LVKLYV G+++KA+S+L++ K+KP Y S L+++++YA
Sbjct: 486 KRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAVQQNKIKPMYSSFLIIMERYAT 545
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GDI A+K+F R+ GY+ I + LI+ +I A P YG++
Sbjct: 546 KGDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKAPCYGMR 589
>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Oryza brachyantha]
Length = 594
Score = 143 bits (360), Expect = 6e-32
Identities = 80/220 (36%), Positives = 127/220 (57%)
Frame = -2
Query: 660 KAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKD 481
KAE LG+ E + N R + +L YALL + DV+RHWK E++ + ++
Sbjct: 348 KAEAILGQMEEDDITEN------RSACKFVLPLYALLGKSADVERHWKVCEANPRL--EE 399
Query: 480 YMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMA 301
+ I A+GMLG ++KAE IFE + + LS Y+A+L+VYAN L K + L + M
Sbjct: 400 CLPAIEAFGMLGEVEKAEEIFENMFKTWKTLSSRFYNAMLKVYANKKLFDKGKELAKRMG 459
Query: 300 KNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDI 121
+G + LVKLY+N G+++KA+S+L + K+KP Y + L++L Y++ GDI
Sbjct: 460 DDGCRVGPSTLDSLVKLYLNAGEVEKADSILHKLSHKDKIKPMYNTYLMLLDSYSKKGDI 519
Query: 120 VIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
A+K+F+ R++GY I Y L++ ++ A P YG +
Sbjct: 520 HNAEKLFSKIRQMGYTGRIRQYQLLLEAYLNAKAPIYGFR 559
>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 142 bits (358), Expect = 9e-32
Identities = 73/213 (34%), Positives = 125/213 (58%)
Frame = -2
Query: 639 EAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKDYMSGISA 460
+AE + SM R+ + ++ YA L ++ DV+R WK +S+ + + +S I A
Sbjct: 367 KAEAILESMEGDMKENRNACKMVMPLYAFLGKKDDVERIWKVCQSNTRLD--ECLSAIEA 424
Query: 459 WGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMAKNGVKED 280
+G LG+++KAE +F + + LS +Y+A++ VYAN NL K + L + M ++G +
Sbjct: 425 FGRLGDVEKAEEVFGNMFKTWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLG 484
Query: 279 RMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDIVIAQKIF 100
LVKLYV+ G+++KAES+L + K+KP Y S L++L Y++IGD+ ++K+F
Sbjct: 485 ISTLDSLVKLYVDAGEVEKAESLLHKLSVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVF 544
Query: 99 AATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
+ R++GY I Y L+ ++ A P YG +
Sbjct: 545 SKLRQMGYNGRIRQYQLLLHAYLHAKAPVYGFR 577
>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
[Theobroma cacao]
Length = 621
Score = 139 bits (351), Expect = 6e-31
Identities = 69/197 (35%), Positives = 124/197 (62%)
Frame = -2
Query: 591 RHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKDYMSGISAWGMLGNIDKAERIFER 412
R R LL YA L + +V+R WK ES+ + ++YM+ I AWG L I++AE +FE
Sbjct: 393 RWACRFLLPLYADLGKAVEVERVWKVCESNPRL--EEYMAAIEAWGKLNKIEEAEAVFEM 450
Query: 411 LLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMAKNGVKEDRMIRSLLVKLYVNMGD 232
+L+ +L +Y++LL+VY+NH + K ++L++ MA +G + + LVKLYV G+
Sbjct: 451 MLKTWKKLPARYYASLLKVYSNHKMLQKGKDLVKRMADDGCQIGPLTWDALVKLYVEAGE 510
Query: 231 LQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDIVIAQKIFAATRKLGYKRDIPMYM 52
++KA+S+L + ++KP + S + V+++Y++ GDI ++K+F R+ GY + +
Sbjct: 511 VEKADSILQKACQQNQVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQ 570
Query: 51 ALIKTHIKANIPAYGLK 1
+L++ ++ A PAYG++
Sbjct: 571 SLVQAYVNAKAPAYGIR 587
>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao]
Length = 623
Score = 139 bits (351), Expect = 6e-31
Identities = 69/197 (35%), Positives = 124/197 (62%)
Frame = -2
Query: 591 RHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKDYMSGISAWGMLGNIDKAERIFER 412
R R LL YA L + +V+R WK ES+ + ++YM+ I AWG L I++AE +FE
Sbjct: 395 RWACRFLLPLYADLGKAVEVERVWKVCESNPRL--EEYMAAIEAWGKLNKIEEAEAVFEM 452
Query: 411 LLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMAKNGVKEDRMIRSLLVKLYVNMGD 232
+L+ +L +Y++LL+VY+NH + K ++L++ MA +G + + LVKLYV G+
Sbjct: 453 MLKTWKKLPARYYASLLKVYSNHKMLQKGKDLVKRMADDGCQIGPLTWDALVKLYVEAGE 512
Query: 231 LQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDIVIAQKIFAATRKLGYKRDIPMYM 52
++KA+S+L + ++KP + S + V+++Y++ GDI ++K+F R+ GY + +
Sbjct: 513 VEKADSILQKACQQNQVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQ 572
Query: 51 ALIKTHIKANIPAYGLK 1
+L++ ++ A PAYG++
Sbjct: 573 SLVQAYVNAKAPAYGIR 589
>ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Capsella rubella]
gi|482575766|gb|EOA39953.1| hypothetical protein
CARUB_v10008643mg [Capsella rubella]
Length = 597
Score = 139 bits (349), Expect = 1e-30
Identities = 75/223 (33%), Positives = 126/223 (56%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE+ L E E E RH+ ++LL Y L R +V R WK E
Sbjct: 348 GLKEKAEKVLKEME------GESLEENRHVCKDLLSIYGFLQRADEVTRIWKICEEKPRY 401
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I A+G + + +AE IFE++L++ HR+S YS LL+VY +H + S+ ++L+
Sbjct: 402 --NESLAAILAFGKIDKVKEAEAIFEKILKMGHRVSSNVYSVLLKVYIDHKMVSEGKDLV 459
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ +G + ++KLYV +G+++KAES LS+ ++KP S + V+ +Y +
Sbjct: 460 KQMSDSGCSIGALTWDAVIKLYVEVGEVEKAESALSKATQSKQIKPLMSSFMHVMDEYVK 519
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGL 4
GD+ +KIF ++ GY+ Y ALI+ ++ A PAYG+
Sbjct: 520 RGDVHNTEKIFERMKQAGYQSRFRAYQALIQAYVNAKAPAYGM 562
Score = 60.1 bits (144), Expect = 6e-07
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Frame = -2
Query: 657 AEETLGEAERVCNSMNEFS-PRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKD 481
A + + E V N M + P +L Y +N++K D + +++ +
Sbjct: 242 ATSNVRKTEEVFNKMRDLGFPLSTFACDQMLILYRRVNKKKIADVLLLMEKENLKPSLNT 301
Query: 480 YMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMA 301
Y I G++ +I E+I E + L S + YA+ L+ KAE +++ M
Sbjct: 302 YKILIDIKGLMNDITGMEQILETMKSEGVELDLRAQSIIARNYASAGLKEKAEKVLKEME 361
Query: 300 KNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDI 121
++E+R + L+ +Y G LQ+A+ V + + + KP Y L + + +I +
Sbjct: 362 GESLEENRHVCKDLLSIY---GFLQRADEV-TRIWKICEEKPRYNESLAAILAFGKIDKV 417
Query: 120 VIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYG 7
A+ IF K+G++ +Y L+K +I + + G
Sbjct: 418 KEAEAIFEKILKMGHRVSSNVYSVLLKVYIDHKMVSEG 455
>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 138 bits (348), Expect = 1e-30
Identities = 74/224 (33%), Positives = 124/224 (55%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE+ L E E E RH+ ++LL Y L R +V R WK E
Sbjct: 345 GLKEKAEKVLKEME------GESLEENRHVYKDLLSVYGFLQRADEVTRIWKICEEKPRY 398
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I A+G + + +AE +FE++L+++HR+S YS LL VY +H + S+ ++L+
Sbjct: 399 --NESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLV 456
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M +G + ++KLY+ G+++KAES LS+ ++KP S + V+ +Y
Sbjct: 457 KQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSKAIQSKQIKPLMSSFMYVMGEYVR 516
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ +KIF ++ GY+ Y ALI+ ++ A PAYG+K
Sbjct: 517 RGDVHNTEKIFQRMKQFGYQSRFRTYQALIQAYVNAKAPAYGMK 560
>ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Solanum tuberosum]
Length = 624
Score = 138 bits (347), Expect = 2e-30
Identities = 78/223 (34%), Positives = 126/223 (56%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E + R R+LL YA L R +V R W+ ES+ +
Sbjct: 375 GLNEKAENVLKEME------GGDTKSTRWACRSLLPHYAALGRADEVARIWQVCESNPRL 428
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
++ ++ + AWG L NI++AE IF+++ LS HYS LL +YANH + SK ++L+
Sbjct: 429 --EECVAAVDAWGKLHNIEEAEAIFDKMAAKWPTLSSKHYSVLLNIYANHKMLSKGKDLV 486
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ MA +G + + LV+LY+ G+++KA+S+L + + +L+P S L+++ +YA+
Sbjct: 487 KRMADSGCRIGPVTWDALVRLYIEAGEVEKADSILHKAGEQNRLRPMINSYLMIMDQYAK 546
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGL 4
GDI +K+F R+ GY Y LI+ +I A P YG+
Sbjct: 547 KGDIHNTEKMFHRMRQAGYVSRATQYQHLIRAYINAKAPCYGI 589
>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 138 bits (347), Expect = 2e-30
Identities = 75/224 (33%), Positives = 132/224 (58%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE L E E E + + LL+ YA L + +V+R WK ES +
Sbjct: 361 GLKEKAEAMLKEME------GENLKENQWVCATLLRLYANLGKADEVERIWKVCESKPRV 414
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+D ++ + AWG L I++AE +FE ++ +L+ +YS LL++YAN+ + +K + L+
Sbjct: 415 --EDCLAAVEAWGKLNKIEEAEAVFE-MVSKKWKLNSKNYSVLLKIYANNKMLTKGKELV 471
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ MA +GV+ + LVKLY+ G+++KA+S+L + +L+P + + L +L++YA+
Sbjct: 472 KLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQNQLQPMFTTYLAILEQYAK 531
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ ++KIF R+ GY I + LI+ ++ A +PAYG++
Sbjct: 532 RGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIR 575
>gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 137 bits (346), Expect = 2e-30
Identities = 74/224 (33%), Positives = 125/224 (55%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE+ L E E E RH+ ++LL Y L RE +V R WK E +
Sbjct: 374 GLKEKAEKVLKEME------GESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRY 427
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I A+G + + AE +FE++L+++HR+S YS LL VY +H + S+ ++L+
Sbjct: 428 --NEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLV 485
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ +G + ++KLYV G+++KAES LS+ ++KP S + ++ +Y
Sbjct: 486 KQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVR 545
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ +KIF ++ GY+ Y LI+ ++ A PAYG+K
Sbjct: 546 RGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMK 589
>tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 137 bits (346), Expect = 2e-30
Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 1/214 (0%)
Frame = -2
Query: 639 EAERVCNSMN-EFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEIPMKDYMSGIS 463
+AE + SM + + R + LL YA L V+R WK E + I + +S I
Sbjct: 367 KAETLLESMEGDDIQKNRAACKFLLPLYAFLGNGDAVERIWKVCEDNTRID--ECLSAID 424
Query: 462 AWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLMEHMAKNGVKE 283
A+G LGN++KAE++FE + LS +Y+ALL+VYAN NL K E L + M + G K
Sbjct: 425 AFGKLGNVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGAKF 484
Query: 282 DRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAEIGDIVIAQKI 103
+ LVKLY + G+++KAES+L + +KP+Y S + +L Y++ GD+ ++K+
Sbjct: 485 GTPTLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKV 544
Query: 102 FAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
F R++GY I MY L+ +++ A PAYG K
Sbjct: 545 FNKLRQIGYTGRIRMYQFLLHSYLHAKAPAYGFK 578
>ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 137 bits (346), Expect = 2e-30
Identities = 74/224 (33%), Positives = 125/224 (55%)
Frame = -2
Query: 672 GMIGKAEETLGEAERVCNSMNEFSPRRRHIIRNLLQPYALLNREKDVDRHWKEIESDVEI 493
G+ KAE+ L E E E RH+ ++LL Y L RE +V R WK E +
Sbjct: 345 GLKEKAEKVLKEME------GESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRY 398
Query: 492 PMKDYMSGISAWGMLGNIDKAERIFERLLELNHRLSGFHYSALLEVYANHNLQSKAENLM 313
+ ++ I A+G + + AE +FE++L+++HR+S YS LL VY +H + S+ ++L+
Sbjct: 399 --NEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLV 456
Query: 312 EHMAKNGVKEDRMIRSLLVKLYVNMGDLQKAESVLSEDYDGTKLKPTYKSLLLVLQKYAE 133
+ M+ +G + ++KLYV G+++KAES LS+ ++KP S + ++ +Y
Sbjct: 457 KQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVR 516
Query: 132 IGDIVIAQKIFAATRKLGYKRDIPMYMALIKTHIKANIPAYGLK 1
GD+ +KIF ++ GY+ Y LI+ ++ A PAYG+K
Sbjct: 517 RGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMK 560