BLASTX nr result

ID: Ephedra27_contig00021728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021728
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76233.1| unknown [Picea sitchensis]                             188   6e-46
ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Sela...   130   2e-28
ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Sela...   130   2e-28
ref|XP_001785617.1| predicted protein [Physcomitrella patens] gi...   112   5e-23
ref|XP_001760235.1| predicted protein [Physcomitrella patens] gi...   110   2e-22

>gb|ADE76233.1| unknown [Picea sitchensis]
          Length = 440

 Score =  188 bits (478), Expect = 6e-46
 Identities = 85/125 (68%), Positives = 103/125 (82%)
 Frame = +3

Query: 18  KKKGVPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNW 197
           +KKG+PGLSLVAD   LPYK+PNPHHEAEKIIPA+LFLQHY ++N++LY FS   E   W
Sbjct: 171 EKKGIPGLSLVADQRYLPYKKPNPHHEAEKIIPALLFLQHYEQSNHTLYWFSRPDEISEW 230

Query: 198 AKGLLEAFNRHMKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDTDTNDWLRQKVLQH 377
            KGLLEAF+    VKY++ P+ KN ++CFEDA+VFSAGT L+YVPD DTNDWLRQ +LQ+
Sbjct: 231 GKGLLEAFSMQTNVKYVEFPDKKNGTVCFEDAIVFSAGTSLHYVPDYDTNDWLRQHILQY 290

Query: 378 CSIPI 392
           CSIPI
Sbjct: 291 CSIPI 295


>ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Selaginella moellendorffii]
           gi|300144332|gb|EFJ11017.1| hypothetical protein
           SELMODRAFT_447140 [Selaginella moellendorffii]
          Length = 470

 Score =  130 bits (327), Expect = 2e-28
 Identities = 58/121 (47%), Positives = 83/121 (68%)
 Frame = +3

Query: 30  VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 209
           + G S++AD   LPY +PNPHHEAEK+IPA L   H+ +N+  LY F++  +  +WAKG 
Sbjct: 112 ITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHHLKNSTMLYWFASPADVSDWAKGF 171

Query: 210 LEAFNRHMKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDTDTNDWLRQKVLQHCSIP 389
           L+A     KV+Y+ LP+  ++S+CF+DA++FS  T + YVP    N WLR KVL +CS+P
Sbjct: 172 LQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSHHHNSWLRDKVLGYCSLP 231

Query: 390 I 392
           I
Sbjct: 232 I 232


>ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Selaginella moellendorffii]
           gi|300140898|gb|EFJ07616.1| hypothetical protein
           SELMODRAFT_448362 [Selaginella moellendorffii]
          Length = 256

 Score =  130 bits (327), Expect = 2e-28
 Identities = 58/121 (47%), Positives = 83/121 (68%)
 Frame = +3

Query: 30  VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 209
           + G S++AD   LPY +PNPHHEAEK+IPA L   H+ +N+  LY F++  +  +WAKG 
Sbjct: 108 ITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHHLKNSTMLYWFASPADVSDWAKGF 167

Query: 210 LEAFNRHMKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDTDTNDWLRQKVLQHCSIP 389
           L+A     KV+Y+ LP+  ++S+CF+DA++FS  T + YVP    N WLR KVL +CS+P
Sbjct: 168 LQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSYHHNSWLRDKVLGYCSLP 227

Query: 390 I 392
           I
Sbjct: 228 I 228


>ref|XP_001785617.1| predicted protein [Physcomitrella patens]
           gi|162662750|gb|EDQ49564.1| predicted protein
           [Physcomitrella patens]
          Length = 568

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/119 (48%), Positives = 80/119 (67%)
 Frame = +3

Query: 30  VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 209
           + GLSLVAD   LP  +PNPHHEAEK+IPA+L L+ +   + SL  F++  +   W  G 
Sbjct: 164 ISGLSLVADQRFLPAGKPNPHHEAEKLIPAVL-LKQFINQSASLQWFASKADVSVWGIGF 222

Query: 210 LEAFNRHMKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDTDTNDWLRQKVLQHCSI 386
           LEAF    KV++ +LP  K+DS+CF+DAV+FS  T   YVP+ +TN  LR +VL++C I
Sbjct: 223 LEAFGLQNKVRFHELPMHKDDSICFKDAVLFSPPTHSRYVPNKETNALLRTEVLRYCGI 281


>ref|XP_001760235.1| predicted protein [Physcomitrella patens]
           gi|162688615|gb|EDQ74991.1| predicted protein
           [Physcomitrella patens]
          Length = 603

 Score =  110 bits (275), Expect = 2e-22
 Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
 Frame = +3

Query: 30  VPGLSLVADLH*LPYKR---PNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEAL--N 194
           + GL +VAD+  +P+ +   PNPHHEAEK+IPA+L    Y   N++LY F++        
Sbjct: 189 IRGLQMVADVKLMPHGKKVGPNPHHEAEKLIPAVLLSHLYGLRNSTLYWFAHRDPKTISR 248

Query: 195 WAKGLLEAFNRHMKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDTDTNDWLRQKVLQ 374
           W+ GL++ F   MKV+++D+P      +CFEDA++FS  T   YVP  + N WLR+KVL 
Sbjct: 249 WSLGLIKVFLETMKVEFMDVPGPDEPQICFEDAILFSGLTNAGYVPGREANAWLREKVLG 308

Query: 375 HCSIPI 392
            C+IP+
Sbjct: 309 FCNIPV 314


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