BLASTX nr result
ID: Ephedra27_contig00021682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021682
(1930 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi... 290 1e-75
ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containi... 275 7e-71
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi... 271 6e-70
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,... 269 3e-69
gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus pe... 268 6e-69
gb|ESW04320.1| hypothetical protein PHAVU_011G085400g [Phaseolus... 267 1e-68
gb|ESW06704.1| hypothetical protein PHAVU_010G069800g [Phaseolus... 263 3e-67
gb|ESW06703.1| hypothetical protein PHAVU_010G069800g [Phaseolus... 263 3e-67
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|5... 261 8e-67
ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citr... 259 2e-66
ref|XP_006573403.1| PREDICTED: pentatricopeptide repeat-containi... 259 4e-66
gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis are... 258 8e-66
ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containi... 256 2e-65
ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containi... 256 2e-65
ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containi... 256 2e-65
gb|EOY32179.1| Pentatricopeptide repeat superfamily protein, put... 253 2e-64
ref|NP_566863.2| pentatricopeptide repeat-containing protein [Ar... 249 2e-63
ref|XP_002875580.1| pentatricopeptide repeat protein [Arabidopsi... 249 3e-63
emb|CAB86446.1| putative protein [Arabidopsis thaliana] 249 4e-63
gb|ABA18107.1| pentatricopeptide repeat protein [Capsella rubella] 248 5e-63
>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
protein product [Vitis vinifera]
Length = 423
Score = 290 bits (743), Expect = 1e-75
Identities = 154/383 (40%), Positives = 231/383 (60%)
Frame = -1
Query: 1555 QKKLLSYDDKKKCYIFFINSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNE 1376
Q++ + D Y I + ++P ++ELL +MKSEG P + L +ML YADN
Sbjct: 45 QERSVDGKDNYVDYTPLIQALSRKRLPHVAQELLFEMKSEGFLPNNSTLSALMLCYADNG 104
Query: 1375 LFEKAFKICHLILDTGLRPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYS 1196
LF KA + I+++ P + KLI A KM H EV +L ++ S++ VYS
Sbjct: 105 LFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYS 164
Query: 1195 AIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPY 1016
I C+ K GQL +M++ +EM+S +D+ T N ++Y+ GSL +++ +Y + K
Sbjct: 165 LAISCFGKGGQLEMMENALKEMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKS 224
Query: 1015 NFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNL 836
++ +E IR M+ YI+ ++++ LG+F+RD+GL R++VG +A FKMK+L
Sbjct: 225 RILIEEEGIRAMSFAYIKEKKYYRLGQFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSL 284
Query: 835 QGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDS 656
Q +FL MVE+GF PDL TFNIRALAFS+M ++WDL++S HMQ + V DLVTY VVD+
Sbjct: 285 QREFLEMVEAGFAPDLTTFNIRALAFSRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDA 344
Query: 655 YLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKC 476
YLD ++ L FA++KM M + P+ TD V+E GKG+F +E F+E + K
Sbjct: 345 YLDRRLGKNLDFALKKMNMDD-SPLVSTDHFVFEVLGKGDFHSSSEAFLE---SKRNGKW 400
Query: 475 TYAKLLRLYLKRHSRKGQLFWNH 407
TY KL+ YLK+ R Q+FWN+
Sbjct: 401 TYRKLIATYLKKKYRSNQIFWNY 423
>ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
[Fragaria vesca subsp. vesca]
Length = 424
Score = 275 bits (702), Expect = 7e-71
Identities = 145/376 (38%), Positives = 229/376 (60%), Gaps = 3/376 (0%)
Frame = -1
Query: 1525 KKCYIF---FINSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFK 1355
K CY+ I S +MP ++E+L MKSEG+ P+ + L VML +A N L +A
Sbjct: 53 KDCYVDCVPLIQSLSRQKMPHVAQEVLLVMKSEGLIPSNSTLSAVMLCHAKNGLLPQAEA 112
Query: 1354 ICHLILDTGLRPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYA 1175
I +L++ P + +L + +V ++ +++S+N+ + VYS I C+
Sbjct: 113 IWDEMLNSSFVPGIQVVSELFDVYGNVGSFGKVNEIVGQIRSRNLSLLPQVYSLAISCFG 172
Query: 1174 KAGQLVLMKSTFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKE 995
K GQL LM+ T +EM+S +D+ T N+ ++Y+ GSL +++ +Y + K F++ +E
Sbjct: 173 KGGQLELMEDTLKEMVSRGFPVDSATGNVFIRYYSIFGSLTEMETAYDRLKRSRFLIEEE 232
Query: 994 TIREMALVYIQHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSM 815
IR M+L Y++ ++F+ L EF++ +GL RR++G +A FKMK LQ +FL M
Sbjct: 233 GIRAMSLAYLKKRKFYSLAEFLKSVGLGRRNLGNLLWNLLLLSYAANFKMKTLQREFLRM 292
Query: 814 VESGFVPDLMTFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMD 635
VE+GF PDL TFNIRALAFS+M + WDL+++ HM+ + V PDLVT +VD+YLD ++
Sbjct: 293 VEAGFHPDLTTFNIRALAFSRMSLLWDLHLTLEHMKHVKVVPDLVTCGCIVDAYLDRRLG 352
Query: 634 NKLMFAIEKMGMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLR 455
L FA+ KM + + PV +TD V+E GKG+F +E F+E R + + TY KL+
Sbjct: 353 RNLYFALNKMNLDD-SPVVLTDPFVFEVLGKGDFHASSEAFLEF---RKQKEWTYQKLIS 408
Query: 454 LYLKRHSRKGQLFWNH 407
+YLK+ R+ Q+FWN+
Sbjct: 409 VYLKKQYRRDQIFWNY 424
>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
[Cucumis sativus] gi|449507537|ref|XP_004163059.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g42630-like [Cucumis sativus]
Length = 388
Score = 271 bits (694), Expect = 6e-70
Identities = 143/366 (39%), Positives = 225/366 (61%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I +MP ++E+ ++KSEG + L T+M+ Y D+ +A + +L++
Sbjct: 27 IKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCF 86
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKS 1145
P + KL A KM H + +L+++K + + YS I C+ K QL LM+S
Sbjct: 87 EPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMES 146
Query: 1144 TFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYI 965
T EM+S+ +++ T N + Y+ GSL++++ +Y + K F++ K+ I MA YI
Sbjct: 147 TLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYI 206
Query: 964 QHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLM 785
+ ++F+ LGEF+RD+GL R++VG +A FKMK+LQ +FL MV++GF PDL
Sbjct: 207 RKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLT 266
Query: 784 TFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKM 605
TFNIRALAFS+M + WDL++S HM+ +N+ PDLVTY VVD+Y+D ++ L F + KM
Sbjct: 267 TFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKM 326
Query: 604 GMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKG 425
+ PV++TDS V+EA GKG+F + +E F++ R + K TY +L+ LYLK+H R+
Sbjct: 327 N-PDQPPVSLTDSFVFEALGKGDFHMSSEAFMQF---RKQKKWTYRELISLYLKKHHRRN 382
Query: 424 QLFWNH 407
Q+FWN+
Sbjct: 383 QVFWNY 388
>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 427
Score = 269 bits (688), Expect = 3e-69
Identities = 140/357 (39%), Positives = 219/357 (61%)
Frame = -1
Query: 1477 PFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVK 1298
P ++E+L +MKS+G L ++L YADN L +A I +L+ P + +
Sbjct: 75 PHLAQEILLEMKSQGYVLNNPTLSAILLCYADNGLLPQAQAIWKHMLNGSFTPSIQIVSR 134
Query: 1297 LIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNV 1118
LI A +K H +EV +L+++ N + YS I C+ K GQL LM++ ++M+
Sbjct: 135 LIDAYSKKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLMENALKDMVLRG 194
Query: 1117 SRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLG 938
+D T N ++Y+ GSL D++++Y + K ++ +E IR ++L Y++ ++F+ LG
Sbjct: 195 FPVDYATGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVKERKFYRLG 254
Query: 937 EFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAF 758
EF+RD+GL R+DVG +A FKMK+LQ +FL M+E+GF PD+ TFNIRALAF
Sbjct: 255 EFLRDVGLGRKDVGNLIWNFLLLSFAANFKMKSLQREFLRMLEAGFHPDVTTFNIRALAF 314
Query: 757 SKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVA 578
S+M + WDL+++ HM+ V+PD+VTY +VD+YLD ++ L FAI+KM + PV
Sbjct: 315 SRMSLLWDLHLTLEHMKHEKVSPDIVTYGCIVDAYLDRRLGKNLDFAIKKMNLDG-SPVL 373
Query: 577 VTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
+TD V+E GKG+F AE F+E +R K TY +L+ +YL++ R Q+FWN+
Sbjct: 374 LTDPFVFEVLGKGDFHSSAEAFLEFKRQR---KWTYRELVSIYLRKQYRSNQIFWNY 427
>gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus persica]
Length = 423
Score = 268 bits (685), Expect = 6e-69
Identities = 139/366 (37%), Positives = 226/366 (61%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I S +MP ++EL+ +MKS+G+ P+ + L +ML +A+N LF +A I +L +
Sbjct: 62 IRSLSRQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSF 121
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKS 1145
P + +L A + +V +L +++S+N+ + VYS I C+ K GQL LM+
Sbjct: 122 VPSIQVVSELFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEG 181
Query: 1144 TFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYI 965
T +EM+S +D+ T N ++Y+ GSL +++ +Y + K F++ +E IR M+ Y+
Sbjct: 182 TLKEMISRGFPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYL 241
Query: 964 QHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLM 785
+ ++F+ L E ++++GL RR++G +A FKMK+LQ +FL MVE+GF PDL
Sbjct: 242 KKRKFYRLAELLKNVGLGRRNLGNLSWNLLLLSYAADFKMKSLQREFLRMVEAGFHPDLT 301
Query: 784 TFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKM 605
TFNIRALAFS+M + WDL++S HM+ V PDLVT VVD+YL+ ++ + FA+ KM
Sbjct: 302 TFNIRALAFSRMSLLWDLHLSLEHMKHEKVFPDLVTCGCVVDAYLERRLGKNMYFALNKM 361
Query: 604 GMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKG 425
+ + P+ +TD V+E GKG+F +E F+E +R + TY +L+ +YLK+ R+
Sbjct: 362 NLDD-SPLILTDPFVFEVLGKGDFHASSEAFLEFQSQR---EWTYRRLISVYLKKQYRRN 417
Query: 424 QLFWNH 407
Q+FWN+
Sbjct: 418 QIFWNY 423
>gb|ESW04320.1| hypothetical protein PHAVU_011G085400g [Phaseolus vulgaris]
gi|561005327|gb|ESW04321.1| hypothetical protein
PHAVU_011G085400g [Phaseolus vulgaris]
Length = 411
Score = 267 bits (682), Expect = 1e-68
Identities = 146/354 (41%), Positives = 210/354 (59%)
Frame = -1
Query: 1468 SEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIK 1289
S+ + K +G P +L +ML Y +N LF +A +L + P + +L
Sbjct: 62 SDGVFHDTKDDGYMPKQTSLCVLMLYYTENGLFPQAQTTWEQLLYSSFVPSVEFISRLFD 121
Query: 1288 ASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRM 1109
A AK EV +L + +N + VYS I C+ + GQL LM+ +EM S +
Sbjct: 122 AYAKHGKFDEVVNILRYVDMRNFSILPNVYSLAISCFGREGQLELMEDMAKEMASRGVHI 181
Query: 1108 DTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFV 929
+ T N + Y+ GSL D++N+Y + K F++ +E IR MA Y + ++F+ LGEF+
Sbjct: 182 SSKTANAFVLYYSIFGSLKDMENAYGRLKKSRFLIEREVIRAMASAYTRERQFYELGEFL 241
Query: 928 RDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKM 749
RD+GL R+DVG +A FKMK+LQ +FL MVESGF PD+ TFNIRALAFS+M
Sbjct: 242 RDVGLVRKDVGNLLWNLMLLSYAANFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRM 301
Query: 748 HMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTD 569
++WDL++S HM+ NV PDLVT+ VVD+YLD + L FA+ KM + + P+ +TD
Sbjct: 302 ALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRGLGKNLNFALNKMNLDD-SPMLLTD 360
Query: 568 SLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
VYEA GKG+FQ+ +E F E R K TY L++ YLK+H R+ Q+FWN+
Sbjct: 361 PFVYEALGKGDFQMSSEAFFEFKTHR---KWTYRALIQKYLKKHYRRNQIFWNY 411
>gb|ESW06704.1| hypothetical protein PHAVU_010G069800g [Phaseolus vulgaris]
gi|561007757|gb|ESW06706.1| hypothetical protein
PHAVU_010G069800g [Phaseolus vulgaris]
Length = 423
Score = 263 bits (671), Expect = 3e-67
Identities = 144/354 (40%), Positives = 208/354 (58%)
Frame = -1
Query: 1468 SEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIK 1289
S+ + K +G P +L +ML Y +N LF A +L + P + +L
Sbjct: 74 SDGVFPDTKDDGYMPKQTSLCVLMLYYTENGLFPLAQTTWEQLLYSSFVPSVEFISRLFD 133
Query: 1288 ASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRM 1109
A AK EV +L + +N + VYS I C+ + GQL LM+ +EM S +
Sbjct: 134 AYAKHGKFDEVVNILRYVDMRNFSILPNVYSLAICCFGREGQLELMEDMAKEMASRGVHV 193
Query: 1108 DTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFV 929
+ T N + Y+ GSL D++N+Y + K F++ +E IR MA Y + ++F+ LGEF+
Sbjct: 194 SSKTGNAFVLYYSIFGSLKDMENAYGRLKKSRFLIEREVIRAMASAYTRERQFYELGEFI 253
Query: 928 RDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKM 749
RD+GL R+D+G + FKMK+LQ +FL MVESGF PD+ TFNIRALAFS+M
Sbjct: 254 RDVGLGRKDLGNLLWNLMLLSYAVNFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRM 313
Query: 748 HMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTD 569
++WDL++S HM+ NV PDLVT+ VVD+YLD + L FA+ KM + + P+ +TD
Sbjct: 314 ALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRGLGRNLNFALNKMNLDD-SPMLLTD 372
Query: 568 SLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
VYEA GKG+FQ+ +E F E R K TY L++ YLK+H R+ Q+FWN+
Sbjct: 373 PFVYEALGKGDFQMSSEAFFEFKTHR---KWTYRALIQKYLKKHYRRNQIFWNY 423
>gb|ESW06703.1| hypothetical protein PHAVU_010G069800g [Phaseolus vulgaris]
gi|561007756|gb|ESW06705.1| hypothetical protein
PHAVU_010G069800g [Phaseolus vulgaris]
Length = 372
Score = 263 bits (671), Expect = 3e-67
Identities = 144/354 (40%), Positives = 208/354 (58%)
Frame = -1
Query: 1468 SEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIK 1289
S+ + K +G P +L +ML Y +N LF A +L + P + +L
Sbjct: 23 SDGVFPDTKDDGYMPKQTSLCVLMLYYTENGLFPLAQTTWEQLLYSSFVPSVEFISRLFD 82
Query: 1288 ASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRM 1109
A AK EV +L + +N + VYS I C+ + GQL LM+ +EM S +
Sbjct: 83 AYAKHGKFDEVVNILRYVDMRNFSILPNVYSLAICCFGREGQLELMEDMAKEMASRGVHV 142
Query: 1108 DTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFV 929
+ T N + Y+ GSL D++N+Y + K F++ +E IR MA Y + ++F+ LGEF+
Sbjct: 143 SSKTGNAFVLYYSIFGSLKDMENAYGRLKKSRFLIEREVIRAMASAYTRERQFYELGEFI 202
Query: 928 RDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKM 749
RD+GL R+D+G + FKMK+LQ +FL MVESGF PD+ TFNIRALAFS+M
Sbjct: 203 RDVGLGRKDLGNLLWNLMLLSYAVNFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRM 262
Query: 748 HMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTD 569
++WDL++S HM+ NV PDLVT+ VVD+YLD + L FA+ KM + + P+ +TD
Sbjct: 263 ALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRGLGRNLNFALNKMNLDD-SPMLLTD 321
Query: 568 SLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
VYEA GKG+FQ+ +E F E R K TY L++ YLK+H R+ Q+FWN+
Sbjct: 322 PFVYEALGKGDFQMSSEAFFEFKTHR---KWTYRALIQKYLKKHYRRNQIFWNY 372
>ref|XP_002331436.1| predicted protein [Populus trichocarpa]
gi|566215849|ref|XP_006372219.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550318750|gb|ERP50016.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 428
Score = 261 bits (667), Expect = 8e-67
Identities = 145/367 (39%), Positives = 217/367 (59%), Gaps = 1/367 (0%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I + C+ + P +EELL ++K EG P L +ML YAD+ L +A I +L +
Sbjct: 66 IQTLCKHRRPHLAEELLLELKCEGFLPDNRTLSAMMLCYADSGLLPQAQAIWEEMLYSSF 125
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKS-KNIIVSKLVYSAIIFCYAKAGQLVLMK 1148
P + LI AK EV +L+++ S + VYS I C+ K GQL LM+
Sbjct: 126 VPSVQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELME 185
Query: 1147 STFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVY 968
T ++M+S +D+ T N + Y+ GSL +++ +Y + K ++ +E IR M+ Y
Sbjct: 186 DTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFAY 245
Query: 967 IQHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDL 788
I+ ++F+ L EF+RD+GL R+++G SA FKMK LQ +FL+M+E+GF PDL
Sbjct: 246 IKERKFYGLSEFLRDVGLGRKNLGNLIWNLLLLSYSANFKMKTLQREFLNMLEAGFHPDL 305
Query: 787 MTFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEK 608
TFNIRALAFS+M + WDL++ HM+ V PDLVTY +VD+YLD ++ L FA+ K
Sbjct: 306 TTFNIRALAFSRMSLLWDLHLGLEHMKHDKVAPDLVTYGCIVDAYLDRRLVRNLEFALSK 365
Query: 607 MGMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRK 428
M + N PV TD V+E FGKG+F +E F+E +R K TY +L+++YL++ R
Sbjct: 366 MHVDN-SPVLSTDPFVFEVFGKGDFHSSSEAFMEFKRQR---KWTYRELIKIYLRKQHRS 421
Query: 427 GQLFWNH 407
+FWN+
Sbjct: 422 KHIFWNY 428
>ref|XP_006453186.1| hypothetical protein CICLE_v10010414mg [Citrus clementina]
gi|568840749|ref|XP_006474328.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X1 [Citrus sinensis]
gi|568840751|ref|XP_006474329.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X2 [Citrus sinensis]
gi|568840753|ref|XP_006474330.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X3 [Citrus sinensis]
gi|568840755|ref|XP_006474331.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X4 [Citrus sinensis]
gi|568840757|ref|XP_006474332.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X5 [Citrus sinensis]
gi|568840759|ref|XP_006474333.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X6 [Citrus sinensis]
gi|557556412|gb|ESR66426.1| hypothetical protein
CICLE_v10010414mg [Citrus clementina]
Length = 412
Score = 259 bits (663), Expect = 2e-66
Identities = 138/357 (38%), Positives = 218/357 (61%)
Frame = -1
Query: 1477 PFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVK 1298
P + +L+ +KSEG+ P + L +ML YA+N +A + +L + L
Sbjct: 60 PHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQVVWEELLSSSFVLSVQVLSD 119
Query: 1297 LIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNV 1118
L+ A ++ +E+ +++++ +N + VYS I C+ K GQL LM++T +EM+S
Sbjct: 120 LMDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRG 179
Query: 1117 SRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLG 938
+D+ T N + Y+ GSL +++ +Y + K ++ KE IR ++ Y++ ++F +LG
Sbjct: 180 FSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLG 239
Query: 937 EFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAF 758
EF+RD+GL R+D+G + FKMK+LQ +F+ M E+GF PDL TFNIRA+AF
Sbjct: 240 EFLRDVGLGRKDLGNLLWNLLLLSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAF 299
Query: 757 SKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVA 578
S+M M+WDL++S HM+ +V PDLVTY VVD+YLD ++ L F + KM + + PV
Sbjct: 300 SRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDD-SPVV 358
Query: 577 VTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
TD V+EAFGKG+F +E F+E +R K TY KL+ +YLK+ R+ Q+FWN+
Sbjct: 359 STDPYVFEAFGKGDFHSSSEAFLEFKRQR---KWTYRKLIAVYLKKQLRRNQIFWNY 412
>ref|XP_006573403.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
[Glycine max]
Length = 415
Score = 259 bits (661), Expect = 4e-66
Identities = 142/359 (39%), Positives = 212/359 (59%)
Frame = -1
Query: 1483 QMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTL 1304
+M S+ L +K EG P +L ML Y +N F +A + ++++ P +
Sbjct: 61 RMIHQSDGSLHDIKVEGYMPKQTSLCVSMLYYTENGFFPQAQTLWEQLVNSSFVPSVQFI 120
Query: 1303 VKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMS 1124
+L A AK V +L + +N + VY I C+ + GQL LM+ EM S
Sbjct: 121 SRLFDAYAKHRKFDVVIDILRYVDMRNFSILPDVYWLAISCFGREGQLELMEDMANEMAS 180
Query: 1123 NVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHL 944
+ + + T N L Y+ G+L +++N+Y + K F++ KE IR +A YI+ ++F+
Sbjct: 181 SGVHIYSRTANAFLLYYSLFGTLEEMENTYGRLKKSRFLIEKEVIRAVASAYIKERKFYE 240
Query: 943 LGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRAL 764
LGEF+RD+GL+R++VG +A FKMK+LQ +F+ MVESGF PD+ TFNIRAL
Sbjct: 241 LGEFLRDVGLRRKNVGNLLWNLMLLSYAANFKMKSLQREFIGMVESGFRPDITTFNIRAL 300
Query: 763 AFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIP 584
AFS+M ++WDL++S HM+ + PDLVT+ VVD+YLD ++ L FA+ KM + + P
Sbjct: 301 AFSRMALFWDLHLSIEHMEHTKIIPDLVTFGCVVDAYLDRRLGRNLDFALNKMNLDD-SP 359
Query: 583 VAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
+TD VYEA GKG FQ+ +E F E +R K TY L++ YLK+H RK Q+FWN+
Sbjct: 360 RLLTDPFVYEALGKGGFQMSSEAFFEYKTQR---KWTYRSLIQKYLKKHYRKNQIFWNY 415
>gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis arenosa]
Length = 419
Score = 258 bits (658), Expect = 8e-66
Identities = 139/408 (34%), Positives = 240/408 (58%)
Frame = -1
Query: 1630 STFKTIFKFLVNSNRLEEAFQVFQLQKKLLSYDDKKKCYIFFINSFCEAQMPFASEELLC 1451
S+ +I + L+ ++L F +K+ D Y + + + ++P + E+
Sbjct: 26 SSAPSIARKLIKESKLSREFS-----RKIQIVD-----YAPLVQTLSQRRLPDVAHEIFI 75
Query: 1450 QMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIKASAKME 1271
Q KS + P L +ML +A+N +A I IL++ P+ + KLI A ++
Sbjct: 76 QTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEILNSSFVPDVFVVSKLISAYEQLG 135
Query: 1270 HVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVN 1091
EV + +++ +++ + +VYS I C+ K GQL LM+ EEM S +D+ T N
Sbjct: 136 FFDEVAKITKDVAARHSTLLPVVYSLAISCFGKNGQLELMEGVIEEMDSKGMSLDSATAN 195
Query: 1090 IILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLK 911
I++Y + G+L ++++Y + K + V+ +E IR + L Y++ ++F+ L EF+ D+GL
Sbjct: 196 AIVRYFSFFGTLDKIEHAYGRLKKFGIVIEEEEIRAVLLAYLKQRKFYRLREFLSDVGLG 255
Query: 910 RRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDL 731
RR++G +A FKMK+LQ +F+ M+++GF PDL TFNIRALAFS+M ++WDL
Sbjct: 256 RRNLGNMLWNSVLLSYAAEFKMKSLQREFIEMLDAGFSPDLTTFNIRALAFSRMALFWDL 315
Query: 730 YVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEA 551
+++ HM++LN+ PDLVT+ VVD+Y+D ++ L F +M + + PV +TD L +E
Sbjct: 316 HLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFVYNQMNLDD-SPVVLTDPLAFEV 374
Query: 550 FGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
GKG+F + +E +E + E++ TY KL+ +Y+K+ R+ Q+FWN+
Sbjct: 375 LGKGDFHLSSEAVLEFSTEKN---WTYRKLIGVYVKKKLRRDQIFWNY 419
>ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
[Solanum lycopersicum]
Length = 381
Score = 256 bits (655), Expect = 2e-65
Identities = 142/366 (38%), Positives = 221/366 (60%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I ++P A+E L+ +MKSEG P + L +ML YA N LF KA I+++
Sbjct: 20 IQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYATNGLFCKALAAWDEIMNSSF 79
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKS 1145
P+ + +LI ++ +L +++ K+ + + VY+ I + K GQL LM+
Sbjct: 80 LPDVHVIAELIDIYGCKGYLDVAVRILHQIQLKDSNLLRDVYAQAISRFGKKGQLELMEV 139
Query: 1144 TFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYI 965
EEM+S +D+ T N + Y+ G+L +++ +Y + K ++ +E IR ++L Y+
Sbjct: 140 MLEEMVSMGFPVDSTTGNAYVIYYSNFGTLSEMEVAYGRLKMSRILIEEEAIRSISLAYL 199
Query: 964 QHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLM 785
+ ++F+ LG+FVRD+GL RR+VG +A FKMK+LQ +F+ MVESGF PDL
Sbjct: 200 KKEKFYSLGQFVRDVGLCRRNVGNLLWNLLLLSYAANFKMKSLQREFVRMVESGFFPDLN 259
Query: 784 TFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKM 605
TFNIRALAFSKM ++WDL+V+ HM+ V PDLVTY +VVD+YLD + L FA+ K+
Sbjct: 260 TFNIRALAFSKMSLFWDLHVTLEHMKHEKVVPDLVTYGSVVDAYLDRGLGRNLDFALRKL 319
Query: 604 GMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKG 425
+ + VA T+ LV+EA GKG+F + +E +E + + TY L+ YLK++ R+
Sbjct: 320 NTNDCVTVA-TEPLVFEAMGKGDFHLSSEARLEFS---KKTNWTYEVLITTYLKKYFRRN 375
Query: 424 QLFWNH 407
Q+FWN+
Sbjct: 376 QIFWNY 381
>ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
isoform X3 [Solanum tuberosum]
Length = 409
Score = 256 bits (654), Expect = 2e-65
Identities = 140/366 (38%), Positives = 223/366 (60%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I ++P A+E L+ +MKSEG P + L +ML YA N LF KA I+++
Sbjct: 48 IQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYASNGLFYKALAAWDEIMNSSF 107
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKS 1145
P+ + +LI ++ +L +++ K+ + + VY+ I + K GQL LM+
Sbjct: 108 LPDVHVIAELIDIYVCKGYLDVAVRILHQIQLKDSNLLRDVYAQAISRFGKKGQLELMEV 167
Query: 1144 TFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYI 965
+EM+S +D+ T N + Y+ G L +++ +Y + K ++ +E IR ++L Y+
Sbjct: 168 MLKEMVSMGFPVDSTTGNAYVIYYSNFGMLSEMEVAYGRLKMSRILIEEEAIRSISLAYL 227
Query: 964 QHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLM 785
+ ++F+ LG+FVRD+GL RR+VG +A FKMK+LQ +F+ MVESGF PDL
Sbjct: 228 KKEKFYSLGQFVRDVGLCRRNVGNLLWNLLLLSYAANFKMKSLQREFVRMVESGFFPDLN 287
Query: 784 TFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKM 605
TFNIRALAFSKM ++WDL+V+ HM+ V PDLVTY +VVD+YLD + L FA+ K+
Sbjct: 288 TFNIRALAFSKMSLFWDLHVTLEHMKHEKVVPDLVTYGSVVDAYLDRGLGRNLDFALRKL 347
Query: 604 GMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKG 425
+ + + VA T+ LV+EA GKG+F + ++ +E + ++ TY +L+ YLK++ R+
Sbjct: 348 NINDCVIVA-TEPLVFEAIGKGDFHLSSDARLEFSKNKN---WTYEELITTYLKKYFRRN 403
Query: 424 QLFWNH 407
Q+FWN+
Sbjct: 404 QIFWNY 409
>ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
isoform X1 [Solanum tuberosum]
gi|565389826|ref|XP_006360649.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g42630-like isoform X2 [Solanum tuberosum]
Length = 416
Score = 256 bits (654), Expect = 2e-65
Identities = 140/366 (38%), Positives = 223/366 (60%)
Frame = -1
Query: 1504 INSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGL 1325
I ++P A+E L+ +MKSEG P + L +ML YA N LF KA I+++
Sbjct: 55 IQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYASNGLFYKALAAWDEIMNSSF 114
Query: 1324 RPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKS 1145
P+ + +LI ++ +L +++ K+ + + VY+ I + K GQL LM+
Sbjct: 115 LPDVHVIAELIDIYVCKGYLDVAVRILHQIQLKDSNLLRDVYAQAISRFGKKGQLELMEV 174
Query: 1144 TFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYI 965
+EM+S +D+ T N + Y+ G L +++ +Y + K ++ +E IR ++L Y+
Sbjct: 175 MLKEMVSMGFPVDSTTGNAYVIYYSNFGMLSEMEVAYGRLKMSRILIEEEAIRSISLAYL 234
Query: 964 QHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLM 785
+ ++F+ LG+FVRD+GL RR+VG +A FKMK+LQ +F+ MVESGF PDL
Sbjct: 235 KKEKFYSLGQFVRDVGLCRRNVGNLLWNLLLLSYAANFKMKSLQREFVRMVESGFFPDLN 294
Query: 784 TFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKM 605
TFNIRALAFSKM ++WDL+V+ HM+ V PDLVTY +VVD+YLD + L FA+ K+
Sbjct: 295 TFNIRALAFSKMSLFWDLHVTLEHMKHEKVVPDLVTYGSVVDAYLDRGLGRNLDFALRKL 354
Query: 604 GMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKG 425
+ + + VA T+ LV+EA GKG+F + ++ +E + ++ TY +L+ YLK++ R+
Sbjct: 355 NINDCVIVA-TEPLVFEAIGKGDFHLSSDARLEFSKNKN---WTYEELITTYLKKYFRRN 410
Query: 424 QLFWNH 407
Q+FWN+
Sbjct: 411 QIFWNY 416
>gb|EOY32179.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 429
Score = 253 bits (646), Expect = 2e-64
Identities = 139/345 (40%), Positives = 210/345 (60%), Gaps = 1/345 (0%)
Frame = -1
Query: 1438 EGIRPTLAALETVMLSYADNELFEKAFKICHLILDT-GLRPETPTLVKLIKASAKMEHVH 1262
+G+ P + L +ML YADN LF +A I +L+T P + K + A KM H H
Sbjct: 88 QGLIPNNSTLSEIMLWYADNGLFPQAQAIWEEMLNTTSFTPSIQVVSKFMDAYGKMGHFH 147
Query: 1261 EVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVNIIL 1082
+V +L+ + + + VY I C+ K G+L LM++T +EM+S +D+ T N +
Sbjct: 148 KVHKILDRVILLRVNLLPEVYPVAISCFGKHGRLDLMENTLKEMVSRGLPVDSATGNAFV 207
Query: 1081 QYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLKRRD 902
+Y+ GSL +++ +Y + K ++ +E IR M+ YI+ +F+ LGEF+ D+GL RR+
Sbjct: 208 RYYSIFGSLSEMEIAYARLKRSRHLIEEEGIRAMSSAYIKEGKFYRLGEFLNDLGLGRRN 267
Query: 901 VGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDLYVS 722
+G +A FKMK +Q FL M++SGF PDL TFNIRA AFS+M M+WDL++S
Sbjct: 268 LGNLLWNLLLLSYAANFKMKTMQRLFLKMMDSGFRPDLTTFNIRAWAFSRMSMFWDLHLS 327
Query: 721 FLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEAFGK 542
HM+ +V DLVTY VVD+YLD ++ L FA+ M + P+ +TD LV+EA GK
Sbjct: 328 LEHMKHESVVSDLVTYGCVVDAYLDRRLARNLDFALNHMNADD-SPLVLTDPLVFEALGK 386
Query: 541 GEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
G+F AE F+E +R + K TY +L+ +YLK+ R+ Q+FWN+
Sbjct: 387 GDFHSSAEAFLEF--KRQKKKWTYRQLIAVYLKKQLRRNQIFWNY 429
>ref|NP_566863.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546757|sp|Q9M2A1.2|PP263_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g42630 gi|332644221|gb|AEE77742.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 415
Score = 249 bits (637), Expect = 2e-63
Identities = 138/408 (33%), Positives = 236/408 (57%)
Frame = -1
Query: 1630 STFKTIFKFLVNSNRLEEAFQVFQLQKKLLSYDDKKKCYIFFINSFCEAQMPFASEELLC 1451
S+ +I K L+ ++L F +K+ D Y + + + ++P + E+
Sbjct: 22 SSAPSIAKKLIKESKLSRDFS-----QKIQIVD-----YAPLVQTLSQRRLPDVAHEIFL 71
Query: 1450 QMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIKASAKME 1271
Q KS + P L +ML +A+N +A I I+++ P+ + KLI A +
Sbjct: 72 QTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVFVVSKLISAYEQFG 131
Query: 1270 HVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVN 1091
EV + +++ +++ + +V S I C+ K GQL LM+ EEM S ++ T N
Sbjct: 132 CFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSKGVLLEAETAN 191
Query: 1090 IILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLK 911
+I++Y+ + GSL ++ +Y + K + V+ +E IR + L Y++ ++F+ L EF+ D+GL
Sbjct: 192 VIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRLREFLSDVGLG 251
Query: 910 RRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDL 731
RR++G +A FKMK+LQ +F+ M+++GF PDL TFNIRALAFS+M ++WDL
Sbjct: 252 RRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGFSPDLTTFNIRALAFSRMALFWDL 311
Query: 730 YVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEA 551
+++ HM++LN+ PDLVT+ VVD+Y+D ++ L F +M + + P+ +TD L +E
Sbjct: 312 HLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFVYNRMNLDD-SPLVLTDPLAFEV 370
Query: 550 FGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
GKG+F + +E +E + R TY KL+ +YLK+ R+ Q+FWN+
Sbjct: 371 LGKGDFHLSSEAVLEFS---PRKNWTYRKLIGVYLKKKLRRDQIFWNY 415
>ref|XP_002875580.1| pentatricopeptide repeat protein [Arabidopsis lyrata subsp. lyrata]
gi|297321418|gb|EFH51839.1| pentatricopeptide repeat
protein [Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 249 bits (636), Expect = 3e-63
Identities = 134/388 (34%), Positives = 228/388 (58%), Gaps = 4/388 (1%)
Frame = -1
Query: 1558 LQKKLLSYDDKKKCYIF----FINSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLS 1391
+++ LS D +K I + + + ++P + E+ Q KS + P L + L
Sbjct: 36 IKESKLSRDFSRKIQIVDYAPLVQTLSQRRLPDVAHEIFIQTKSVNLLPNYRTLCALTLC 95
Query: 1390 YADNELFEKAFKICHLILDTGLRPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVS 1211
+A+N +A I IL++ P+ + KL+ A ++ EV + +++ +++ +
Sbjct: 96 FAENGFVLRARMIWDGILNSSFVPDVFVVSKLMSAYEQVGCFDEVAKITKDVAARHSKLL 155
Query: 1210 KLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYK 1031
+VYS I C+ K GQL LM+ EEM +D+ T N I++Y + G+L L+ +Y
Sbjct: 156 PVVYSVAISCFGKNGQLELMEGVIEEMDLKGISLDSATANAIVRYFSFFGTLDKLEQAYG 215
Query: 1030 KCKPYNFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATF 851
+ K + V+ +E IR + L Y++ ++F+ L EF+ D+GL RR++G +A F
Sbjct: 216 RLKKFGIVIEEEEIRAVLLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADF 275
Query: 850 KMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYS 671
KMK+LQ +F+ M+++GF PDL TFNIRALAFS+M ++WD++++ HM++LN+ PDLVT+
Sbjct: 276 KMKSLQREFIGMLDAGFSPDLTTFNIRALAFSRMALFWDIHLTLEHMRRLNIVPDLVTFG 335
Query: 670 AVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGER 491
VVD+Y+D ++ L F +M + + PV +TD L +E GKG+F + +E +E +
Sbjct: 336 CVVDAYMDKRLARNLEFVYNQMNLDD-SPVVLTDPLAFEVLGKGDFHLSSEAVLEFS--- 391
Query: 490 HRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
R TY KL+ +YLK+ R+ Q+FWN+
Sbjct: 392 PRKNWTYRKLIGVYLKKKLRRDQIFWNY 419
>emb|CAB86446.1| putative protein [Arabidopsis thaliana]
Length = 412
Score = 249 bits (635), Expect = 4e-63
Identities = 130/370 (35%), Positives = 221/370 (59%)
Frame = -1
Query: 1516 YIFFINSFCEAQMPFASEELLCQMKSEGIRPTLAALETVMLSYADNELFEKAFKICHLIL 1337
Y + + + ++P + E+ Q KS + P L +ML +A+N +A I I+
Sbjct: 47 YAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEII 106
Query: 1336 DTGLRPETPTLVKLIKASAKMEHVHEVRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLV 1157
++ P+ + KLI A + EV + +++ +++ + +V S I C+ K GQL
Sbjct: 107 NSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQLE 166
Query: 1156 LMKSTFEEMMSNVSRMDTLTVNIILQYHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMA 977
LM+ EEM S ++ T N+I++Y+ + GSL ++ +Y + K + V+ +E IR +
Sbjct: 167 LMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAVV 226
Query: 976 LVYIQHQRFHLLGEFVRDIGLKRRDVGTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFV 797
L Y++ ++F+ L EF+ D+GL RR++G +A FKMK+LQ +F+ M+++GF
Sbjct: 227 LAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGFS 286
Query: 796 PDLMTFNIRALAFSKMHMYWDLYVSFLHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFA 617
PDL TFNIRALAFS+M ++WDL+++ HM++LN+ PDLVT+ VVD+Y+D ++ L F
Sbjct: 287 PDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFV 346
Query: 616 IEKMGMQNLIPVAVTDSLVYEAFGKGEFQVFAENFVELTGERHRHKCTYAKLLRLYLKRH 437
+M + + P+ +TD L +E GKG+F + +E +E + R TY KL+ +YLK+
Sbjct: 347 YNRMNLDD-SPLVLTDPLAFEVLGKGDFHLSSEAVLEFS---PRKNWTYRKLIGVYLKKK 402
Query: 436 SRKGQLFWNH 407
R+ Q+FWN+
Sbjct: 403 LRRDQIFWNY 412
>gb|ABA18107.1| pentatricopeptide repeat protein [Capsella rubella]
Length = 411
Score = 248 bits (634), Expect = 5e-63
Identities = 134/404 (33%), Positives = 235/404 (58%)
Frame = -1
Query: 1618 TIFKFLVNSNRLEEAFQVFQLQKKLLSYDDKKKCYIFFINSFCEAQMPFASEELLCQMKS 1439
+I + L+ ++L F +K+ S D Y + + + +P + E+ Q KS
Sbjct: 22 SIARKLIKESKLSRVFS-----RKIQSVD-----YAPLVQNLSQRTLPDVAYEIFIQSKS 71
Query: 1438 EGIRPTLAALETVMLSYADNELFEKAFKICHLILDTGLRPETPTLVKLIKASAKMEHVHE 1259
+ + P L +ML +A+N +A I +L++ L P+ + KLI A K+ + E
Sbjct: 72 DNLLPNYRTLCALMLCFAENGFVNRARTIWDEMLNSSLEPDLIFISKLISAYVKVGSLDE 131
Query: 1258 VRILLEEMKSKNIIVSKLVYSAIIFCYAKAGQLVLMKSTFEEMMSNVSRMDTLTVNIILQ 1079
V ++++++++ + VYS + C+ + GQ LM EE+ +D+ T N I++
Sbjct: 132 VAKIIKDVEARYSKLLPSVYSLAVSCFGENGQFELMDGIIEELDIRGMPLDSATANAIVR 191
Query: 1078 YHCYAGSLIDLQNSYKKCKPYNFVLFKETIREMALVYIQHQRFHLLGEFVRDIGLKRRDV 899
++ G+L ++++Y + + + V+ E IR + L Y++ ++F+ L EF+ D+GL RR++
Sbjct: 192 HYSSFGTLDKMEHAYGRLRKFGIVIEDEEIRAVLLAYLKLRKFYRLREFLSDVGLCRRNL 251
Query: 898 GTXXXXXXXXXXSATFKMKNLQGDFLSMVESGFVPDLMTFNIRALAFSKMHMYWDLYVSF 719
G +A FKMK+LQ +F+ M+++GF PDL TFNIRALAFS+M ++WDL+++
Sbjct: 252 GNLLWNSVLLSYAADFKMKSLQREFIGMLDAGFSPDLTTFNIRALAFSRMALFWDLHLTL 311
Query: 718 LHMQQLNVTPDLVTYSAVVDSYLDGKMDNKLMFAIEKMGMQNLIPVAVTDSLVYEAFGKG 539
HM++LN+ PDLVT+ VVD+Y+D ++ L F +M + + P +TD L +E GKG
Sbjct: 312 EHMRRLNIVPDLVTFGCVVDAYMDRRLARNLEFVYNRMNLDD-SPAVLTDPLAFEVLGKG 370
Query: 538 EFQVFAENFVELTGERHRHKCTYAKLLRLYLKRHSRKGQLFWNH 407
+F + +E +E + R K TY KL+ +YLK+ R+ Q+FWN+
Sbjct: 371 DFHLSSEAVLEFS---PRTKWTYRKLIGVYLKKKLRRDQIFWNY 411