BLASTX nr result
ID: Ephedra27_contig00021669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021669
(698 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEW09142.1| hypothetical protein CL4264Contig1_01, partial [P... 78 2e-12
gb|AFG51138.1| hypothetical protein CL4264Contig1_01, partial [P... 77 4e-12
gb|AFG51127.1| hypothetical protein CL4264Contig1_01, partial [P... 77 4e-12
gb|ABK24048.1| unknown [Picea sitchensis] 76 1e-11
ref|NP_565253.1| putative E3 ubiquitin-protein ligase RHA2B [Ara... 73 8e-11
gb|EXC35106.1| E3 ubiquitin-protein ligase RHA1B [Morus notabilis] 73 1e-10
ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [A... 73 1e-10
ref|XP_006425388.1| hypothetical protein CICLE_v10027145mg [Citr... 72 1e-10
gb|EMT32136.1| RING finger protein 165 [Aegilops tauschii] 72 1e-10
gb|ABR17475.1| unknown [Picea sitchensis] 72 1e-10
emb|CBI27119.3| unnamed protein product [Vitis vinifera] 72 2e-10
ref|XP_002531146.1| nucleic acid binding protein, putative [Rici... 72 2e-10
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 72 2e-10
emb|CAN82924.1| hypothetical protein VITISV_039590 [Vitis vinifera] 72 2e-10
ref|XP_002309999.1| hypothetical protein POPTR_0007s06120g [Popu... 71 4e-10
ref|XP_002335928.1| predicted protein [Populus trichocarpa] 71 4e-10
gb|EWM24570.1| e3 ubiquitin-protein ligase [Nannochloropsis gadi... 70 5e-10
ref|XP_004959625.1| PREDICTED: RING-H2 finger protein ATL44-like... 70 5e-10
emb|CBI27116.3| unnamed protein product [Vitis vinifera] 70 5e-10
gb|EMJ05638.1| hypothetical protein PRUPE_ppa027002mg [Prunus pe... 70 6e-10
>gb|AEW09142.1| hypothetical protein CL4264Contig1_01, partial [Pinus radiata]
gi|383139705|gb|AFG51124.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139707|gb|AFG51125.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139709|gb|AFG51126.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139713|gb|AFG51128.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139715|gb|AFG51129.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139717|gb|AFG51130.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139719|gb|AFG51131.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139721|gb|AFG51132.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139725|gb|AFG51134.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139729|gb|AFG51136.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139731|gb|AFG51137.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139735|gb|AFG51139.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139737|gb|AFG51140.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
Length = 66
Score = 78.2 bits (191), Expect = 2e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPPA 411
CAVCL KF+ G EIR+LPCCH FHR+C+D+W H +TCPLCR+ + A
Sbjct: 15 CAVCLCKFEEGVEIRQLPCCHLFHRSCLDKWLDHQQITCPLCRSCLISEEA 65
>gb|AFG51138.1| hypothetical protein CL4264Contig1_01, partial [Pinus taeda]
Length = 66
Score = 77.4 bits (189), Expect = 4e-12
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPPA 411
CAVCL KF+ G EIR+LPCCH FHR+C+D+W H +TCP+CR+ + A
Sbjct: 15 CAVCLCKFEEGVEIRQLPCCHLFHRSCLDKWLDHQQITCPMCRSCLISEEA 65
>gb|AFG51127.1| hypothetical protein CL4264Contig1_01, partial [Pinus taeda]
gi|383139723|gb|AFG51133.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
gi|383139727|gb|AFG51135.1| hypothetical protein
CL4264Contig1_01, partial [Pinus taeda]
Length = 66
Score = 77.4 bits (189), Expect = 4e-12
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPPA 411
CAVCL KF+ G EIR+LPCCH FHR C+D+W H +TCPLCR+ + A
Sbjct: 15 CAVCLCKFEEGVEIRQLPCCHLFHRPCLDKWLDHQQITCPLCRSCLISEEA 65
>gb|ABK24048.1| unknown [Picea sitchensis]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -1
Query: 587 VRTSNSEM-CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPPA 411
V + NS + CAVCL KF+ G EIR+L CCH FHR C+D+W H +TCPLCR+ + A
Sbjct: 96 VGSDNSHVECAVCLSKFEEGVEIRQLTCCHLFHRPCLDKWLDHQQITCPLCRSCLISEEA 155
>ref|NP_565253.1| putative E3 ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]
gi|51316550|sp|Q9ZU51.2|RHA2B_ARATH RecName:
Full=Probable E3 ubiquitin-protein ligase RHA2B;
AltName: Full=RING-H2 zinc finger protein RHA2b
gi|3790571|gb|AAC68672.1| RING-H2 finger protein RHA2b
[Arabidopsis thaliana] gi|20197589|gb|AAD14516.2|
RING-H2 finger protein RHA2b [Arabidopsis thaliana]
gi|98960889|gb|ABF58928.1| At2g01150 [Arabidopsis
thaliana] gi|330250313|gb|AEC05407.1| putative E3
ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]
Length = 147
Score = 73.2 bits (178), Expect = 8e-11
Identities = 34/66 (51%), Positives = 40/66 (60%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPPAHQLSGCSAR 384
C VCL K K GEE+R+L C H FH+ C++ W QH N CPLCR+ L P HQ G A
Sbjct: 74 CIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS-PLLPHHHQGHGSDAS 132
Query: 383 RSLFAL 366
S F L
Sbjct: 133 ISAFPL 138
>gb|EXC35106.1| E3 ubiquitin-protein ligase RHA1B [Morus notabilis]
Length = 174
Score = 72.8 bits (177), Expect = 1e-10
Identities = 45/109 (41%), Positives = 54/109 (49%), Gaps = 21/109 (19%)
Frame = -1
Query: 698 VMSVFHRLGLS------------GPPPSYSDTEDTVECIEIQEKAV--------SVAVRT 579
+ S+FH LGLS PP+ S V + I+E SVA
Sbjct: 30 IFSLFHFLGLSDFLETDVVWPQSSSPPAQSPENPPVSALLIRELLPVIKFSDLDSVAGAG 89
Query: 578 SNSEMCAVCLRKFKAGEEIRRLPCC-HEFHRACVDRWFQHSNLTCPLCR 435
++ E CAVCL +F EEIR L C H FHRAC+DRW H TCPLCR
Sbjct: 90 NSPESCAVCLYEFDGEEEIRWLTNCRHIFHRACLDRWMDHDQKTCPLCR 138
>ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [Amborella trichopoda]
gi|548834078|gb|ERM96515.1| hypothetical protein
AMTR_s00001p00263220 [Amborella trichopoda]
Length = 166
Score = 72.8 bits (177), Expect = 1e-10
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = -1
Query: 572 SEMCAVCLRKFKAGEEIRRLP-CCHEFHRACVDRWFQHSNLTCPLCR 435
SE CAVCL +F+ EEIRRL CCH FHR+C+DRW H TCPLCR
Sbjct: 86 SESCAVCLYEFEGREEIRRLANCCHIFHRSCLDRWMDHDQKTCPLCR 132
>ref|XP_006425388.1| hypothetical protein CICLE_v10027145mg [Citrus clementina]
gi|557527378|gb|ESR38628.1| hypothetical protein
CICLE_v10027145mg [Citrus clementina]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1
Query: 569 EMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALG 420
E C VCL + K G+++R LPC H FHRACVDRWF TCPLCR F++G
Sbjct: 65 ESCCVCLSRLKQGDDMRVLPCLHRFHRACVDRWFNEWTKTCPLCR-FSMG 113
>gb|EMT32136.1| RING finger protein 165 [Aegilops tauschii]
Length = 112
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/65 (47%), Positives = 38/65 (58%)
Frame = -1
Query: 623 CIEIQEKAVSVAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCP 444
CI+ + A + + E C VCL + +AGE RRLPC H FHR CVDRW TCP
Sbjct: 13 CIKTPSSEEAAAKQPAAGEECCVCLSRIRAGEATRRLPCEHAFHRDCVDRWLALCKRTCP 72
Query: 443 LCRAF 429
LCR +
Sbjct: 73 LCRVY 77
>gb|ABR17475.1| unknown [Picea sitchensis]
Length = 184
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRW-FQHSNLTCPLCRAFALGPPAHQL 402
C VCLRKF GEEIR LPC H FH+ CVD+W + N+TCPLCR + P +L
Sbjct: 120 CVVCLRKFHGGEEIRTLPCGHVFHKICVDKWILDYENMTCPLCRVCLVFPVEDEL 174
>emb|CBI27119.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 72.0 bits (175), Expect = 2e-10
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = -1
Query: 593 VAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCR 435
V + E CAVCL K +AGEEIR L C H FHR C+DRW Q+ TCPLCR
Sbjct: 16 VKLGCEEGEECAVCLCKIEAGEEIRELRCDHLFHRVCLDRWLQYKRATCPLCR 68
>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223529259|gb|EEF31231.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 137
Score = 72.0 bits (175), Expect = 2e-10
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1
Query: 596 SVAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALG 420
S + E C VCL + K GE +R LPC H FHR C+DRWF TCP+CR FA+G
Sbjct: 52 SAETAEAEGEFCCVCLSRLKGGENMRVLPCMHRFHRVCIDRWFNVCRKTCPVCR-FAMG 109
>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
Length = 167
Score = 72.0 bits (175), Expect = 2e-10
Identities = 44/103 (42%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Frame = -1
Query: 698 VMSVFHRLGLSG---PPPSYSDTE------DTVECIEIQE-----KAVSVAVRTSNSEMC 561
+ S+FH LGLS S+S+T+ V + I+E K E C
Sbjct: 30 IFSLFHFLGLSDFLETDVSWSETQAQVPEYPPVSAVLIREILPVMKFGEAVCGGDAPESC 89
Query: 560 AVCLRKFKAGEEIRRLPCC-HEFHRACVDRWFQHSNLTCPLCR 435
AVCL F+ GEEIRRL C H FHR+C+DRW H TCPLCR
Sbjct: 90 AVCLYDFEVGEEIRRLTNCKHIFHRSCLDRWMDHDQKTCPLCR 132
>emb|CAN82924.1| hypothetical protein VITISV_039590 [Vitis vinifera]
Length = 350
Score = 72.0 bits (175), Expect = 2e-10
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = -1
Query: 593 VAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCR 435
V + E CAVCL K +AGEEIR L C H FHR C+DRW Q+ TCPLCR
Sbjct: 79 VKLGCEEGEECAVCLCKIEAGEEIRELRCDHLFHRVCLDRWLQYKRATCPLCR 131
>ref|XP_002309999.1| hypothetical protein POPTR_0007s06120g [Populus trichocarpa]
gi|222852902|gb|EEE90449.1| hypothetical protein
POPTR_0007s06120g [Populus trichocarpa]
Length = 163
Score = 70.9 bits (172), Expect = 4e-10
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 584 RTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFAL 423
R +S CAVCL KF GE +R+L C H FH+ C+D+W Q S TCPLCRA L
Sbjct: 69 RQQDSMECAVCLSKFSEGESVRKLNCKHTFHKDCLDKWLQQSLATCPLCRAKVL 122
>ref|XP_002335928.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 70.9 bits (172), Expect = 4e-10
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -1
Query: 584 RTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFAL 423
R +S CAVCL KF GE +R+L C H FH+ C+D+W Q S TCPLCRA L
Sbjct: 16 RQQDSMECAVCLSKFSEGESVRKLNCKHTFHKDCLDKWLQQSLATCPLCRAKVL 69
>gb|EWM24570.1| e3 ubiquitin-protein ligase [Nannochloropsis gaditana]
Length = 326
Score = 70.5 bits (171), Expect = 5e-10
Identities = 37/90 (41%), Positives = 47/90 (52%)
Frame = -1
Query: 674 GLSGPPPSYSDTEDTVECIEIQEKAVSVAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEF 495
G + PP S +DT VSV SNS CAVC+ ++ E++R LPC H F
Sbjct: 149 GQAAPPASQGGEQDT---------QVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYF 199
Query: 494 HRACVDRWFQHSNLTCPLCRAFALGPPAHQ 405
H +CVD W + N +CP CRA L A Q
Sbjct: 200 HASCVDEWLK-VNASCPTCRASILPESAEQ 228
>ref|XP_004959625.1| PREDICTED: RING-H2 finger protein ATL44-like [Setaria italica]
Length = 190
Score = 70.5 bits (171), Expect = 5e-10
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Frame = -1
Query: 674 GLSGPPPSYSD-TEDTVECIEIQEKAVSVAV--RTSNSEMCAVCLRKFKAGEEIRRLPCC 504
G P P+ ++ T+ +E I + AV V R + E CAVCL ++ GEE+R LP C
Sbjct: 78 GTGAPEPAAAEETKRALEEIPVVVVAVPVPDPDRGAEGEECAVCLAEYACGEEVRVLPAC 137
Query: 503 -HEFHRACVDRWFQHSNLTCPLCRA-FALGPPAHQLSGCS 390
H FHR CVDRW TCP+CRA A P H C+
Sbjct: 138 RHGFHRECVDRWLLTRAPTCPVCRAPVATRPEGHGGKACA 177
>emb|CBI27116.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 70.5 bits (171), Expect = 5e-10
Identities = 32/50 (64%), Positives = 34/50 (68%)
Frame = -1
Query: 563 CAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCPLCRAFALGPP 414
CAVCL K + GEEIR L C H FHR C+DRW H N TCPLCR L PP
Sbjct: 96 CAVCLCKIEEGEEIRELRCDHMFHRDCLDRWVGHRNGTCPLCRG-CLAPP 144
>gb|EMJ05638.1| hypothetical protein PRUPE_ppa027002mg [Prunus persica]
Length = 118
Score = 70.1 bits (170), Expect = 6e-10
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = -1
Query: 623 CIEIQEKAVSVAVRTSNSEMCAVCLRKFKAGEEIRRLPCCHEFHRACVDRWFQHSNLTCP 444
C E+ E S + ++C VCL + GE++R LPC HEFH+ CVD+WF TCP
Sbjct: 29 CYEVIE---SEGGKIVEEDVCCVCLSRLVEGEDVRSLPCLHEFHKVCVDKWFDACRTTCP 85
Query: 443 LCR 435
LCR
Sbjct: 86 LCR 88