BLASTX nr result
ID: Ephedra27_contig00021556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021556
(1149 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17073.1| unknown [Picea sitchensis] 86 2e-14
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici... 86 4e-14
gb|ACN40904.1| unknown [Picea sitchensis] 84 8e-14
ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [A... 84 1e-13
gb|AFK35896.1| unknown [Lotus japonicus] 84 1e-13
ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like ... 84 1e-13
ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like ... 84 1e-13
ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group] g... 84 1e-13
gb|AFW70296.1| putative RING zinc finger domain superfamily prot... 84 1e-13
gb|ABK26617.1| unknown [Picea sitchensis] 84 1e-13
ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 83 2e-13
ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citr... 83 2e-13
ref|XP_004233333.1| PREDICTED: RING-H2 finger protein ATL3-like ... 83 2e-13
ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Caps... 82 3e-13
emb|CBI17870.3| unnamed protein product [Vitis vinifera] 82 3e-13
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like... 82 3e-13
ref|XP_006419513.1| hypothetical protein CICLE_v10005780mg [Citr... 82 4e-13
tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamil... 82 4e-13
gb|AEI72266.1| ring zinc finger transcription factor [Citrus tri... 82 4e-13
ref|NP_001131506.1| uncharacterized protein LOC100192844 precurs... 82 4e-13
>gb|ABR17073.1| unknown [Picea sitchensis]
Length = 187
Score = 86.3 bits (212), Expect = 2e-14
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Frame = +2
Query: 194 MAAQISQFLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR--------------GLSHSD 331
+AA +S L L + ++V LW W + R R GLS +D
Sbjct: 7 LAAMMSLLL---LCAAIGVMVLAYLWLVWYVSLHQSLRQRPLEDNGNGKPPKQQGLSEAD 63
Query: 332 LKGLSTMVFQSHKDEEDPE-----ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 496
L+ L T+ + K+EE E ECAVCL +F GD CR++P+CSH FHV CAD WL +
Sbjct: 64 LQRLPTI--ECCKEEEGDERTGNAECAVCLEAFQSGDRCRVIPVCSHAFHVQCADAWLSK 121
Query: 497 HSTCPLCRCS 526
S CPLCR S
Sbjct: 122 RSVCPLCRRS 131
>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
gi|223526251|gb|EEF28567.1| RING-H2 finger protein
ATL1M, putative [Ricinus communis]
Length = 281
Score = 85.5 bits (210), Expect = 4e-14
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Frame = +2
Query: 227 VLLMGLAIVVALSL---WYFWN------------------HLPSSTKRVRGLSHSDLKGL 343
+L M + V+ L L W++W P+ RGL S L+ L
Sbjct: 23 ILFMVVVFVLLLHLYAKWFWWRIEEPTSPPHSRRNRRRFVFTPAQDPVRRGLDMSVLRSL 82
Query: 344 STMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRC 523
++FQS +D +D ECAVCL + G+ RL+P C+H FHV C D W + HSTCPLCR
Sbjct: 83 PVVIFQS-EDFKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRN 141
Query: 524 SV 529
SV
Sbjct: 142 SV 143
>gb|ACN40904.1| unknown [Picea sitchensis]
Length = 218
Score = 84.3 bits (207), Expect = 8e-14
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Frame = +2
Query: 227 VLLMGLAIVVALSLWYFW----NHLP--------SSTKRVRGLSHSDLKGLSTMVFQSHK 370
+L G+ + VA+ LW W N+ P + +GLS +DL+ L T+ Q +
Sbjct: 48 LLCAGMGMGVAVYLWLVWYVSLNNRPRQRASEDNGKPHKHQGLSEADLQRLPTIECQEEE 107
Query: 371 DEEDP-----EECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCS 526
ECAVCL F GD CR++P CSH FHV CAD WL + S CP+CR S
Sbjct: 108 SHAGDGGGGDAECAVCLEVFQSGDRCRVIPACSHAFHVHCADAWLSKRSVCPICRRS 164
>ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [Amborella trichopoda]
gi|548846631|gb|ERN05907.1| hypothetical protein
AMTR_s00006p00267830 [Amborella trichopoda]
Length = 169
Score = 84.0 bits (206), Expect = 1e-13
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Frame = +2
Query: 185 ISSMAAQISQFLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR---------GLSHSDLK 337
I MA IS L L +G+ ++V + + L S R G+S DL+
Sbjct: 13 IMVMAIVISVIL---LFVGIGVLVLIHVCIVGRALRSGMIIARSNVNSGNSSGISREDLQ 69
Query: 338 GLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLC 517
L +++ E+ P +CAVCL F GD CRL+P+C H FH C D WL + CP+C
Sbjct: 70 RLPCFDYKTGDKEKGPIDCAVCLDGFQGGDKCRLLPICKHSFHAQCVDSWLLKAPICPIC 129
Query: 518 RCSVVLLK 541
R SV L K
Sbjct: 130 RTSVCLSK 137
>gb|AFK35896.1| unknown [Lotus japonicus]
Length = 286
Score = 84.0 bits (206), Expect = 1e-13
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 293 SSTKRVR-GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 469
S +R R GL S L+ L +VFQS +D +D ECAVCL G+ RL+P C+H FHV
Sbjct: 66 SEPRRPRTGLDPSVLRSLPVVVFQS-QDFKDGLECAVCLSELDEGEKARLLPKCNHGFHV 124
Query: 470 SCADQWLRRHSTCPLCRCSV 529
C D W + HSTCPLCR SV
Sbjct: 125 DCIDMWFQSHSTCPLCRTSV 144
>ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like [Solanum tuberosum]
Length = 236
Score = 83.6 bits (205), Expect = 1e-13
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = +2
Query: 317 LSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 496
+SH D++ L + FQS P ECAVCL + G+ CRL+PLC+H FH C D WL +
Sbjct: 49 MSHEDIEKLPSYAFQSKDKGTSPIECAVCLDNLKVGEKCRLLPLCNHSFHAECIDLWLLK 108
Query: 497 HSTCPLCRCSVVLLK 541
S CP+CR + LK
Sbjct: 109 TSICPMCRATADFLK 123
>ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like [Fragaria vesca subsp.
vesca]
Length = 288
Score = 83.6 bits (205), Expect = 1e-13
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +2
Query: 311 RGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWL 490
RGL S LK L V+ S E ECAVCL F + R++P C H FH+ C D W
Sbjct: 92 RGLDESVLKSLPVFVYDSKTHPEAVLECAVCLSEFEENETGRVLPKCKHSFHIECIDMWF 151
Query: 491 RRHSTCPLCRCSV 529
HSTCPLCRC+V
Sbjct: 152 HSHSTCPLCRCAV 164
>ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|77554889|gb|ABA97685.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113649188|dbj|BAF29700.1| Os12g0432600 [Oryza sativa
Japonica Group] gi|215766317|dbj|BAG98545.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 185
Score = 83.6 bits (205), Expect = 1e-13
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Frame = +2
Query: 245 AIVVALSLWYFW--------------NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEED 382
A+++A + W+ W +H P++ RGLS D++ + ++
Sbjct: 60 AVLLAAAGWFTWYYFGAAPAPPVLPDHHQPAAPVEARGLSQEDIEAIPAFEYRRGSSGSG 119
Query: 383 PEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSVV 532
+CAVC+ + GD R +P C H FH C D WLR H+TCP+CR VV
Sbjct: 120 VAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLRDHATCPMCRADVV 169
>gb|AFW70296.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 247
Score = 83.6 bits (205), Expect = 1e-13
Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Frame = +2
Query: 218 LSWVLLMGLAIVVALSLWYFWNHLPS---------STKRVRGLSHSDLKGLSTMVFQSHK 370
+S+ L+ + +V+ WY S KR +GL + L V+Q K
Sbjct: 82 ISFGSLLAILLVMCAIRWYLVRRSASRDATAAAELEKKRSKGLGADAIAALPEFVYQKEK 141
Query: 371 DEEDPEE-------CAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSV 529
D D EE CAVCLG+ GD +P C H FH C D WLR HSTCP+CR V
Sbjct: 142 DANDGEEEEERELECAVCLGAMVHGDAALRLPPCMHVFHRGCVDVWLREHSTCPVCRAEV 201
Query: 530 VL 535
V+
Sbjct: 202 VV 203
>gb|ABK26617.1| unknown [Picea sitchensis]
Length = 186
Score = 83.6 bits (205), Expect = 1e-13
Identities = 52/129 (40%), Positives = 69/129 (53%), Gaps = 26/129 (20%)
Frame = +2
Query: 218 LSWVLLM-GLAIVVALSLWYFW----------NHLPSS----TKRVRGLSHSDLKGLSTM 352
LS++LL G+ VV + LW W PS ++ +GLS +DL+ L T+
Sbjct: 10 LSFLLLCAGIGGVVLVYLWLIWYVSLHEMSNRGRRPSEGNGKAQKQQGLSAADLQRLPTI 69
Query: 353 VFQSHKDEEDPE-----------ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRH 499
+ K+EE E ECAVCL F GD CR++P+CSH FHV CAD WL +
Sbjct: 70 --ECGKEEEGEERSSGSRGGGNAECAVCLEIFQNGDRCRVIPVCSHAFHVQCADAWLSKC 127
Query: 500 STCPLCRCS 526
S CP+CR S
Sbjct: 128 SVCPICRRS 136
>ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Citrus sinensis]
Length = 428
Score = 82.8 bits (203), Expect = 2e-13
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +2
Query: 296 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 475
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 84 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 143
Query: 476 ADQWLRRHSTCPLCRCSV 529
DQWL +HS+CPLCR V
Sbjct: 144 IDQWLEKHSSCPLCRLKV 161
>ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citrus clementina]
gi|557554472|gb|ESR64486.1| hypothetical protein
CICLE_v10010254mg [Citrus clementina]
Length = 415
Score = 82.8 bits (203), Expect = 2e-13
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +2
Query: 296 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 475
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 71 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 130
Query: 476 ADQWLRRHSTCPLCRCSV 529
DQWL +HS+CPLCR V
Sbjct: 131 IDQWLEKHSSCPLCRLKV 148
>ref|XP_004233333.1| PREDICTED: RING-H2 finger protein ATL3-like [Solanum lycopersicum]
Length = 170
Score = 82.8 bits (203), Expect = 2e-13
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +2
Query: 317 LSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 496
+SH D++ L + FQS +DP ECAVCL + G+ CRL+PLC+H FH C D WL +
Sbjct: 49 MSHEDIEKLPSYAFQS----KDPMECAVCLDNLKVGEKCRLLPLCNHSFHAECIDLWLLK 104
Query: 497 HSTCPLCRCSVVLLK 541
S CP+CR + LK
Sbjct: 105 TSICPICRSTADFLK 119
>ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Capsella rubella]
gi|482567413|gb|EOA31602.1| hypothetical protein
CARUB_v10014799mg [Capsella rubella]
Length = 163
Score = 82.4 bits (202), Expect = 3e-13
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = +2
Query: 314 GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLR 493
GL + ++ L ++F+ +E+ EEC +CLG F GD +++P CSH +H C D+WL+
Sbjct: 81 GLDPATIRSLPVVLFRREAADEEEEECCICLGGFEEGDKMKVLPPCSHCYHCECVDRWLK 140
Query: 494 RHSTCPLCRCSV 529
+ S+CPLCR S+
Sbjct: 141 KESSCPLCRVSI 152
>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 82.4 bits (202), Expect = 3e-13
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 287 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 466
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 467 VSCADQWLRRHSTCPLCRCSV 529
V C D WL HSTCPLCR V
Sbjct: 154 VECVDTWLDAHSTCPLCRYRV 174
>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
Length = 404
Score = 82.4 bits (202), Expect = 3e-13
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 287 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 466
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 467 VSCADQWLRRHSTCPLCRCSV 529
V C D WL HSTCPLCR V
Sbjct: 154 VECVDTWLDAHSTCPLCRYRV 174
>ref|XP_006419513.1| hypothetical protein CICLE_v10005780mg [Citrus clementina]
gi|568871740|ref|XP_006489038.1| PREDICTED: RING-H2
finger protein ATL2-like [Citrus sinensis]
gi|557521386|gb|ESR32753.1| hypothetical protein
CICLE_v10005780mg [Citrus clementina]
Length = 234
Score = 82.0 bits (201), Expect = 4e-13
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = +2
Query: 290 PSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 469
PS+T RGL S LK L V+ S K D +CAVCL F + R++P C+H FH+
Sbjct: 76 PSATSS-RGLDSSVLKSLPVFVYSS-KTHADAMDCAVCLSEFEENESGRVLPGCNHSFHI 133
Query: 470 SCADQWLRRHSTCPLCRCSVVLLKKKHYDYILP 568
C D W HSTCPLCR V L+ + D + P
Sbjct: 134 GCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 166
>tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 377
Score = 82.0 bits (201), Expect = 4e-13
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +2
Query: 281 NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHY 460
++ P ++R+RGL + L TM + + + ECAVCL F GD RL+P C+H
Sbjct: 90 SYAPPPSRRMRGLDRAVLDSFPTMAYADVRAHKGALECAVCLSEFDDGDTLRLLPRCAHA 149
Query: 461 FHVSCADQWLRRHSTCPLCRCSVVL 535
FH C D WL H TCP+CR +++
Sbjct: 150 FHTDCIDAWLASHVTCPVCRAILLV 174
>gb|AEI72266.1| ring zinc finger transcription factor [Citrus trifoliata]
Length = 234
Score = 82.0 bits (201), Expect = 4e-13
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = +2
Query: 290 PSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 469
PS+T RGL S LK L V+ S K D +CAVCL F + R++P C+H FH+
Sbjct: 76 PSATSS-RGLDSSVLKSLPVFVYSS-KTHADAMDCAVCLSEFEENESGRVLPGCNHSFHI 133
Query: 470 SCADQWLRRHSTCPLCRCSVVLLKKKHYDYILP 568
C D W HSTCPLCR V L+ + D + P
Sbjct: 134 GCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 166
>ref|NP_001131506.1| uncharacterized protein LOC100192844 precursor [Zea mays]
gi|194691718|gb|ACF79943.1| unknown [Zea mays]
Length = 377
Score = 82.0 bits (201), Expect = 4e-13
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +2
Query: 281 NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHY 460
++ P ++R+RGL + L TM + + + ECAVCL F GD RL+P C+H
Sbjct: 90 SYAPPPSRRMRGLDRAVLDSFPTMAYADVRAHKGALECAVCLSEFDDGDTLRLLPRCAHA 149
Query: 461 FHVSCADQWLRRHSTCPLCRCSVVL 535
FH C D WL H TCP+CR +++
Sbjct: 150 FHTDCIDAWLASHVTCPVCRAILLV 174