BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021543
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295767.1| PREDICTED: alternative NAD(P)H dehydrogenase...    59   1e-06
ref|XP_003519255.1| PREDICTED: internal alternative NAD(P)H-ubiq...    57   3e-06
ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidore...    57   3e-06
ref|NP_180560.1| alternative NAD(P)H dehydrogenase 2 [Arabidopsi...    57   3e-06
ref|XP_003544888.1| PREDICTED: internal alternative NAD(P)H-ubiq...    57   4e-06
ref|XP_006417828.1| hypothetical protein EUTSA_v10007398mg [Eutr...    57   5e-06
ref|XP_006377305.1| hypothetical protein POPTR_0011s04440g, part...    57   5e-06
ref|XP_002317236.1| predicted protein [Populus trichocarpa]            57   5e-06
gb|ESW31258.1| hypothetical protein PHAVU_002G223400g [Phaseolus...    56   7e-06
gb|ESW14190.1| hypothetical protein PHAVU_008G260300g [Phaseolus...    56   7e-06
gb|EMJ06246.1| hypothetical protein PRUPE_ppa004595mg [Prunus pe...    56   7e-06
ref|XP_003532554.1| PREDICTED: internal alternative NAD(P)H-ubiq...    56   7e-06
ref|XP_002889635.1| hypothetical protein ARALYDRAFT_887930 [Arab...    56   7e-06
ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata s...    56   7e-06
ref|XP_003551266.1| PREDICTED: internal alternative NAD(P)H-ubiq...    56   9e-06

>ref|XP_004295767.1| PREDICTED: alternative NAD(P)H dehydrogenase 2, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 498

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 17/75 (22%)
 Frame = +1

Query: 430 LNRVSSRSIASTTEKSE--------------TKGAKEV---PYYAGLEPTQAGHKARIVV 558
           L R SSR+  S+T KS               T+ A+ V   P ++GL PT+ G K R+VV
Sbjct: 7   LIRASSRASPSSTTKSRISDPFSYSLLSCFTTEAARPVQPPPAFSGLRPTKPGEKPRVVV 66

Query: 559 LGSGWAGCRVMKSLD 603
           LG+GWAGCR+MK LD
Sbjct: 67  LGTGWAGCRLMKELD 81


>ref|XP_003519255.1| PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase
           A1, mitochondrial-like isoform X1 [Glycine max]
           gi|571441339|ref|XP_006575414.1| PREDICTED: internal
           alternative NAD(P)H-ubiquinone oxidoreductase A1,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 485

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
 Frame = +1

Query: 427 WLNRVSSRSIAST-------TEKSETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCR 585
           WL  +SS+  ++T       T  S    +     +AGL PTQA  K R+VVLGSGWAGCR
Sbjct: 3   WLRHLSSKFSSTTITSTRRFTSLSRFSTSTAPARHAGLGPTQAHEKPRVVVLGSGWAGCR 62

Query: 586 VMKSLD 603
           +MK LD
Sbjct: 63  LMKGLD 68


>ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223535094|gb|EEF36776.1| Rotenone-insensitive
           NADH-ubiquinone oxidoreductase, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 472

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +1

Query: 502 PYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           P YAGL PT+ G K R+VVLGSGWAGCR+MK +D
Sbjct: 48  PQYAGLPPTKPGEKPRLVVLGSGWAGCRLMKGID 81


>ref|NP_180560.1| alternative NAD(P)H dehydrogenase 2 [Arabidopsis thaliana]
           gi|75318710|sp|O80874.1|NDA2_ARATH RecName:
           Full=Internal alternative NAD(P)H-ubiquinone
           oxidoreductase A2, mitochondrial; AltName: Full=Internal
           alternative NADH dehydrogenase NDA2; AltName:
           Full=NADH:ubiquinone reductase (non-electrogenic) NDA2;
           Flags: Precursor gi|3420052|gb|AAC31853.1| putative NADH
           dehydrogenase (ubiquinone oxidoreductase) [Arabidopsis
           thaliana] gi|330253238|gb|AEC08332.1| alternative
           NAD(P)H dehydrogenase 2 [Arabidopsis thaliana]
          Length = 508

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
 Frame = +1

Query: 352 FWFKNRSMIGLHGS--LTDKDNSGGVPWLNRVSSRSIASTTEKSETKGAKEVP------Y 507
           F  KN + I  + S  +T   NSG       ++SR    T ++++ +   ++P       
Sbjct: 2   FMIKNLTRISPNTSSIITRFRNSGSSSLSYTLASRFC--TAQETQIQSPAKIPNDVDRSQ 59

Query: 508 YAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           Y+GL PT+ G K R+VVLGSGWAGCR+MK +D
Sbjct: 60  YSGLPPTREGEKPRVVVLGSGWAGCRLMKGID 91


>ref|XP_003544888.1| PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase
           A1, mitochondrial-like [Glycine max]
          Length = 485

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +1

Query: 508 YAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           +AGLEPTQA  K R+VVLGSGWAGCR+MK LD
Sbjct: 37  HAGLEPTQAHEKPRVVVLGSGWAGCRLMKGLD 68


>ref|XP_006417828.1| hypothetical protein EUTSA_v10007398mg [Eutrema salsugineum]
           gi|557095599|gb|ESQ36181.1| hypothetical protein
           EUTSA_v10007398mg [Eutrema salsugineum]
          Length = 510

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
 Frame = +1

Query: 352 FWFKNRSMIGLHGSLTDKDNSGGVPWLNRVSSR----------SIASTTEKSETKGAKEV 501
           FW KN  ++ +  + +   N    P    +SSR           I+ T + ++     E 
Sbjct: 2   FWIKN--LVRISPATSSVGNVFRNPESYTLSSRFCTALQQQKQQISETVQAADVVDGLEE 59

Query: 502 PYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
             Y GL PT+ G K R++VLGSGWAGCR+MK +D
Sbjct: 60  HRYEGLAPTKEGEKPRVLVLGSGWAGCRLMKGID 93


>ref|XP_006377305.1| hypothetical protein POPTR_0011s04440g, partial [Populus
           trichocarpa] gi|550327573|gb|ERP55102.1| hypothetical
           protein POPTR_0011s04440g, partial [Populus trichocarpa]
          Length = 267

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +1

Query: 436 RVSSRSIASTTEK--SETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           RV+ R  ++T E+   E++   + P Y GLE T+ G K R+VVLG+GWA CR MK LD
Sbjct: 72  RVTPRYQSATAERIVEESESEYDEPRYPGLEATKPGEKPRVVVLGTGWAACRFMKGLD 129


>ref|XP_002317236.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +1

Query: 436 RVSSRSIASTTEK--SETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           RV+ R  ++T E+   E++   + P Y GLE T+ G K R+VVLG+GWA CR MK LD
Sbjct: 15  RVTPRYQSATAERIVEESESEYDEPRYPGLEATKPGEKPRVVVLGTGWAACRFMKGLD 72


>gb|ESW31258.1| hypothetical protein PHAVU_002G223400g [Phaseolus vulgaris]
          Length = 552

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 418 GVPWLNRVSSRSIASTTE-KSETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCRVMK 594
           G P+    S+ S     E +SE++   + P YAGLE T+ G K R+VVLG+GWA CR +K
Sbjct: 72  GTPYHQFPSANSQTVVQESESESELENDQPIYAGLEATKPGEKPRVVVLGTGWAACRFLK 131

Query: 595 SLD 603
            LD
Sbjct: 132 GLD 134


>gb|ESW14190.1| hypothetical protein PHAVU_008G260300g [Phaseolus vulgaris]
          Length = 477

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = +1

Query: 427 WLNRVSSRSIASTTEKSETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           W   +SS++   T+    +     V ++AGL PT+A  K R+VVLGSGWAGCR+MK LD
Sbjct: 3   WFRHLSSKTRRFTSLSRFSTSTSPV-HHAGLGPTKAHEKPRVVVLGSGWAGCRLMKGLD 60


>gb|EMJ06246.1| hypothetical protein PRUPE_ppa004595mg [Prunus persica]
          Length = 501

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = +1

Query: 355 WFKNRSMIGLHGSLTDKDNSGGVPWLNRVSSRSIASTTEKSETKGAKEVPYYAGLEPTQA 534
           WF++   +        K      P+   + SR  +      ET   +    Y+GL PT+ 
Sbjct: 3   WFRSLIQVSATARSATKPRISD-PFSYTLLSRFSSEPAPIHETPAPQPPTQYSGLGPTKP 61

Query: 535 GHKARIVVLGSGWAGCRVMKSLD 603
           G K R+VVLG+GWAGCR+MK LD
Sbjct: 62  GEKPRVVVLGTGWAGCRLMKGLD 84


>ref|XP_003532554.1| PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase
           A1, mitochondrial-like [Glycine max]
          Length = 550

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 37/112 (33%), Positives = 51/112 (45%)
 Frame = +1

Query: 268 SNYSKSYTHNSSRILSQKSGLHNSGYENFWFKNRSMIGLHGSLTDKDNSGGVPWLNRVSS 447
           SN        S R  S    +    Y NF     SM G+ G+  D              S
Sbjct: 37  SNIPSHKFFESDRKFSYVPRIKEQNYINF-----SMRGISGTPYD-----------HFPS 80

Query: 448 RSIASTTEKSETKGAKEVPYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
            S  +  E+SE +   +   YAGL+PT+ G K R+VV+G+GWA CR +K +D
Sbjct: 81  ASTQTVIEESEYEFESDRQRYAGLQPTKPGEKPRVVVIGTGWAACRFLKGID 132


>ref|XP_002889635.1| hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp.
           lyrata] gi|297335477|gb|EFH65894.1| hypothetical protein
           ARALYDRAFT_887930 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
 Frame = +1

Query: 352 FWFKNRSMIGLHGSLTDKDNSGGV---PWLNRVSSRSIASTTEKSE--TKGAKEV----- 501
           FW KN   I    S T   + G V   P    +SSR   +  ++ E  T  AK+V     
Sbjct: 2   FWIKNLVRI----SQTTSSSVGNVFRNPESYTLSSRFCTALQKQPEIETVQAKDVVNGLE 57

Query: 502 -PYYAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
              Y GL PT+ G K R++VLGSGWAGCR+MK +D
Sbjct: 58  PQRYDGLAPTKEGEKPRVLVLGSGWAGCRLMKGID 92


>ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297326918|gb|EFH57338.1| NDA2 H dehydrogenase 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 504

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
 Frame = +1

Query: 352 FWFKNRSMIGLHGS--LTDKDNSGGVPWLNRVSSRSIASTTEKSETKGAKEVPYYAGLEP 525
           F  KN + I    S  +T   ++G     +R  + S       ++     +   YAGL P
Sbjct: 2   FLIKNLTRISPTSSSIVTRFRSTGSYTLASRFCTASETQIQSPAKIPNGVDRSQYAGLAP 61

Query: 526 TQAGHKARIVVLGSGWAGCRVMKSLD 603
           T+ G K R+VVLGSGWAGCR+MK +D
Sbjct: 62  TREGEKPRVVVLGSGWAGCRLMKGID 87


>ref|XP_003551266.1| PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase
           A1, mitochondrial-like [Glycine max]
          Length = 506

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +1

Query: 457 ASTTEKSETKGAKEVPY-YAGLEPTQAGHKARIVVLGSGWAGCRVMKSLD 603
           +ST    E    + V Y Y+GLEPT+   K R+VVLGSGWAGCR+MK LD
Sbjct: 40  SSTNTIEEKPCVEPVEYNYSGLEPTRPHEKPRVVVLGSGWAGCRLMKGLD 89