BLASTX nr result

ID: Ephedra27_contig00021359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021359
         (1447 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006832891.1| hypothetical protein AMTR_s00095p00112100 [A...    65   7e-08
ref|XP_006373661.1| hypothetical protein POPTR_0016s02520g [Popu...    62   5e-07
gb|EXC30767.1| hypothetical protein L484_027942 [Morus notabilis]      62   6e-07
ref|XP_002278583.1| PREDICTED: uncharacterized protein LOC100249...    59   5e-06

>ref|XP_006832891.1| hypothetical protein AMTR_s00095p00112100 [Amborella trichopoda]
            gi|548837391|gb|ERM98169.1| hypothetical protein
            AMTR_s00095p00112100 [Amborella trichopoda]
          Length = 446

 Score = 65.1 bits (157), Expect = 7e-08
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
 Frame = +3

Query: 831  RFSCDGREISRSSS-PMDLNREHVLRCSSLKIRD-SSPSRIDTPKRSPGLVARLMGLDDI 1004
            RFSCD   I RS +   D+         S   R   SP ++  P   PGLVARLMGL+++
Sbjct: 101  RFSCD---IPRSPTLSQDIRNNWRSNSVSSGFRQMGSPEKLQRP---PGLVARLMGLEEL 154

Query: 1005 PGSSSLQETTNLQDEEESFNEKSPYLATVQTLEKRQRLISELESCDRDLQALKRIVEALQ 1184
            P    L    NL ++ +  + +S         +KR+ ++  LE CD DL+AL++I+EA+Q
Sbjct: 155  PSPRCLNLPENLPEKPQEISPESAE-------KKRRIILGALEKCDEDLRALRKIIEAVQ 207

Query: 1185 LKEAYQ 1202
            + E ++
Sbjct: 208  IAEDFK 213


>ref|XP_006373661.1| hypothetical protein POPTR_0016s02520g [Populus trichocarpa]
            gi|550320658|gb|ERP51458.1| hypothetical protein
            POPTR_0016s02520g [Populus trichocarpa]
          Length = 231

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 8/214 (3%)
 Frame = +3

Query: 567  KDRSPKTPPANLAKEILSPNSIANQKLSSNNGSDKDVLSTNNI--FLEAKETLKEVSLGS 740
            K + P    ++  +   +P  I ++ +   +G  + V   +N   FL   +  +   + S
Sbjct: 2    KGQDPSLSSSSRRESSPAPEKIRSKSIGCMSGIFQVVYKYHNRRRFLTFGKKNERNGVSS 61

Query: 741  KEILVRKQDEIIPGEISKMSSKISML-----RDSPRFSCDGREISRSSS-PMDLNREHVL 902
                 +++    P + S   S  S       +DSPRFSCD   + RS + P ++ R   L
Sbjct: 62   PTTKTKQKPRPTPSQPSSSPSSSSTSLQQENKDSPRFSCD--IVPRSPTLPAEIRRSKSL 119

Query: 903  RCSSLKIRDSSPSRIDTPKRSPGLVARLMGLDDIPGSSSLQETTNLQDEEESFNEKSPYL 1082
                     +SP R   P   P LVARLMGL DIP  ++ +                   
Sbjct: 120  ---------NSPERFRAP---PALVARLMGLSDIPPLTTSE------------------- 148

Query: 1083 ATVQTLEKRQRLISELESCDRDLQALKRIVEALQ 1184
              +   EKR+RL+  LE CD DL+ALK+I++ ++
Sbjct: 149  --LAVAEKRRRLLGALEKCDEDLKALKKIIDVVK 180


>gb|EXC30767.1| hypothetical protein L484_027942 [Morus notabilis]
          Length = 413

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
 Frame = +3

Query: 798  SSKISMLRDSPRFSCDGREISRSSSPMDLNREHVLRCS-------SLKIRDS----SPSR 944
            S+KI+   +SP  +  G   ++  +  + N      C          KIR S    SP  
Sbjct: 69   SNKINETNNSPPLTVKGESKAKDQAKCNTNNLQRFSCEVPRSPTLPAKIRRSNSVNSPEN 128

Query: 945  IDTPKRSPGLVARLMGLDDIPGSSSLQETTNLQDEEESFNEKSPYLATVQ--TLEKRQRL 1118
               P   P L+ARLMGL++ P ++S           ++   +SP +   +  T EKR+RL
Sbjct: 129  FRAP---PALMARLMGLEEAPTATS-----------KALPPRSPLVVPSEYSTAEKRRRL 174

Query: 1119 ISELESCDRDLQALKRIVEALQLKE 1193
            +  LE CDRDL+ALK+I++A++  E
Sbjct: 175  LGALEKCDRDLKALKKIIDAVRSAE 199


>ref|XP_002278583.1| PREDICTED: uncharacterized protein LOC100249911 [Vitis vinifera]
            gi|297741721|emb|CBI32853.3| unnamed protein product
            [Vitis vinifera]
          Length = 355

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +3

Query: 831  RFSCDGREISRSSS-PMDLNREHVLRCSSLKIRDSSPSRIDTPKRSPGLVARLMGLDDIP 1007
            RFSCD   + RS + P ++ R +           +SP+   TP   P LVARLMGL+ IP
Sbjct: 80   RFSCD---VQRSPTLPAEIRRSNSA---------NSPANFRTP---PALVARLMGLNVIP 124

Query: 1008 GSSSLQETTNLQDEEESFNEKSPYLATVQTLEKRQRLISELESCDRDLQALKRIVEALQL 1187
             + +  E+T                      EKRQ+L+  LE CD DL+ALK+I++A++ 
Sbjct: 125  AAPASPEST---------------------AEKRQKLLGALEKCDEDLKALKKIIDAVRS 163

Query: 1188 KE 1193
             E
Sbjct: 164  SE 165


Top