BLASTX nr result

ID: Ephedra27_contig00021259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021259
         (568 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001766001.1| predicted protein [Physcomitrella patens] gi...    97   3e-18
gb|ABR18087.1| unknown [Picea sitchensis]                              92   9e-17
ref|XP_001784598.1| predicted protein [Physcomitrella patens] gi...    87   4e-15

>ref|XP_001766001.1| predicted protein [Physcomitrella patens]
           gi|162682644|gb|EDQ69060.1| predicted protein
           [Physcomitrella patens]
          Length = 590

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 68/191 (35%), Positives = 109/191 (57%), Gaps = 2/191 (1%)
 Frame = +1

Query: 1   GESCPGIAKLCLDLDHLDIGAALQSVSS--LGIRELRLRFLHGDLSKLAGVSSLVSLHID 174
           G  C G+ KL L+L  ++I  AL+SV+     +R+L L++   +L +L+  +SL SL  +
Sbjct: 219 GMKCVGLLKLVLELGAVNIDQALKSVAHGCHMLRDLSLKYTTANLWELSRCTSLRSLAFE 278

Query: 175 TDQYVNVEESLVEIVTANKGLKEFMYFNSRSLLTDGALIKIARECAHLEKVCVFASALTE 354
           +D+   ++E++V I TANK L EF+   S + L+D A+I +  +C  L+K+ + A+ LTE
Sbjct: 279 SDEEYQLDEAVVAIATANKNLTEFV---SPNRLSDSAVIALLLKCPQLQKLHLDATNLTE 335

Query: 355 MSIMCVMELKGLTCLGFGHFNSEGQSLTAIALSTTRLKELSLRLTRNVTDTELETIMYAN 534
             + C+ + K L+ L   +F S GQ L  I L      + SL L   V D EL+ +M  N
Sbjct: 336 GVLSCIQQCKFLSDLSLDNFQSTGQGLGGIGLCGLDFNKFSL-LHARVRDMELQLLMDGN 394

Query: 535 SPQLERMDLKG 567
             QL  + L+G
Sbjct: 395 R-QLGHLVLRG 404


>gb|ABR18087.1| unknown [Picea sitchensis]
          Length = 569

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
 Frame = +1

Query: 1   GESCPGIAKLCLDLDHLDIGAALQS--VSSLGIRELRLRFLHGDLSKLAGVSSLVSLHID 174
           GE+C G+  + L+ + LDI  AL+S  ++   +  L L+F HGDL +L+   SLV LHI+
Sbjct: 208 GENCRGLVAVGLEFETLDISLALKSLAINCQELETLTLKFSHGDLGELSRCRSLVRLHIE 267

Query: 175 TDQYVNVEESLVEIVTANKGLKEFMYFNSRSLLTDGALIKIARECAHLEKVCVFASALTE 354
            D   + +  +  I  AN+ +KEF Y NS + L D A + I   C  LE++C        
Sbjct: 268 ADNSNDADIPITNIAAANRKMKEFSYVNSLAPLGDSAAVTIMHNCPDLERLC-------- 319

Query: 355 MSIMCVMELKGLTCLGFGHFNSEGQSLTAIALSTTRLKELSLRLTRNVTDT--------- 507
                              F+S G+SL+ +A S  RLKE+++     + D          
Sbjct: 320 -------------------FHSGGRSLSVLAQSGIRLKEINVIFGWGIRDVMIHGQGNWD 360

Query: 508 -ELETIMYANSPQLERMDLK 564
            ELE ++ +N  QLE+++L+
Sbjct: 361 IELEALIRSNQ-QLEKINLQ 379


>ref|XP_001784598.1| predicted protein [Physcomitrella patens]
           gi|162663830|gb|EDQ50573.1| predicted protein
           [Physcomitrella patens]
          Length = 679

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
 Frame = +1

Query: 1   GESCPGIAKLCLDLDHLDIGAALQSVSS--LGIRELRLRFLHGDLSKLAGVSSLVSLHID 174
           G  C  + KL L+L  ++I   L+SV+     +R++ L+F    L +L+  +SL SL  +
Sbjct: 307 GAKCGELVKLVLELGAVNIDPVLKSVAHGCHRLRDVSLKFKTAKLRELSLCTSLRSLAFE 366

Query: 175 TDQYVNVEESLVEIVTANKGLKEFMYFNSRSLLTDGALIKIARECAHLEKVCVFASALTE 354
           +D+   ++E++V I T+N  L E    N    L+D A+  +  +C  L+ + + A  +TE
Sbjct: 367 SDEEDRLDEAVVAIATSNSNLIELTSVNR---LSDFAVTTVILKCPRLQALHLDAMNVTE 423

Query: 355 MSIMCVMELKGLTCLGFGHFNSEGQSLTAIALSTTRLKELSLRLTRNVTDTELETIMYAN 534
             +  + + K L+ L   +F S GQ L  I L     K+ SL   R V D ELE +++ N
Sbjct: 424 GVLPYIQQCKFLSDLSLDNFQSTGQGLAEIGLCGLDFKKFSLSHARGVRDVELEILIHGN 483

Query: 535 SPQLERMDLKG 567
             QLE+++L+G
Sbjct: 484 -VQLEQLNLRG 493


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