BLASTX nr result

ID: Ephedra27_contig00021215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021215
         (654 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16154.1| unknown [Picea sitchensis]                              74   4e-11

>gb|ABR16154.1| unknown [Picea sitchensis]
          Length = 565

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 68/208 (32%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
 Frame = +3

Query: 87  MSRSRKVENWWHREGNYHNCHHSPTSIAYQNPTALEGGSEDPVIMACTKGASYHRGGLIP 266
           M  S+K +  WH E      HH+  +++    + +   S+          +S+ R  L+P
Sbjct: 1   MMSSQKADRLWHGESAIEP-HHAVQAVSTTIASQISNTSKSEGPTFAKDNSSFQR--LVP 57

Query: 267 QTASPDSLDS-DNRDNNAFSHMRERGSMXXXXXXXXXXXXXX----VVDPAHQVSSTSST 431
           Q  S DS +  D+   N F       S                   VV+P + +SSTSST
Sbjct: 58  QAVSSDSPEPVDSGQENPFPRFSLSSSSKKLNSSPMSSNIIPALSNVVNPEN-ISSTSST 116

Query: 432 FCTNLHFSHPSTT----AAALPFLPHPTK-----------QSCLSQSLFSGDYMRQPPQG 566
           FCT+LHFS  S +       LPFLPHP++           QS  SQSLFSGDYM+   Q 
Sbjct: 117 FCTDLHFSPSSISQHHPPGILPFLPHPSECSLRASVMPPSQSAFSQSLFSGDYMK---QS 173

Query: 567 YHDSSHSAPSSFEEIFTMFDGGVSEGSQ 650
           Y D+    P   ++IF  F    SE SQ
Sbjct: 174 YGDTHTGDP--LQDIFN-FPDVASECSQ 198


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