BLASTX nr result
ID: Ephedra27_contig00021121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00021121
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838751.1| hypothetical protein AMTR_s00002p00255750 [A... 89 8e-16
ref|XP_002322903.2| hypothetical protein POPTR_0016s10980g [Popu... 62 6e-08
gb|EMJ05873.1| hypothetical protein PRUPE_ppa000451mg [Prunus pe... 58 4e-07
gb|AFW67974.1| hypothetical protein ZEAMMB73_560135 [Zea mays] 59 7e-07
ref|XP_002284049.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 ... 57 1e-06
gb|EMT10907.1| E3 ubiquitin-protein ligase UPL7 [Aegilops tauschii] 57 2e-06
ref|XP_002528627.1| ubiquitin-protein ligase, putative [Ricinus ... 52 3e-06
ref|XP_004303054.1| PREDICTED: E3 ubiquitin-protein ligase UPL7-... 56 6e-06
>ref|XP_006838751.1| hypothetical protein AMTR_s00002p00255750 [Amborella trichopoda]
gi|548841257|gb|ERN01320.1| hypothetical protein
AMTR_s00002p00255750 [Amborella trichopoda]
Length = 1157
Score = 88.6 bits (218), Expect = 8e-16
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLKSNAIPSAAWALANIVNLASTQSS--GHSGQFISKLNCKDYTLS 232
I+KE+IF++MS L+ + IPSAAWALANI+NL S SG F+ L KDY L+
Sbjct: 327 IAKENIFVQMSNLN--QHMGIPSAAWALANIINLTSVHDKDCSDSGGFVEGLELKDYVLT 384
Query: 233 LCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEKAQSL 412
+C I ++L PW++ ++T K+ D D N++ + A
Sbjct: 385 VCSISDHLLPWLEDIRQTNKKENDEDIIHGNIEERGASGYSNA---------------PF 429
Query: 413 IEYLRPFQMQWHLCQLLSSME 475
I+ LRP QWHL +LL+S++
Sbjct: 430 IDLLRPVHQQWHLTRLLTSLK 450
>ref|XP_002322903.2| hypothetical protein POPTR_0016s10980g [Populus trichocarpa]
gi|550321241|gb|EEF04664.2| hypothetical protein
POPTR_0016s10980g [Populus trichocarpa]
Length = 1173
Score = 62.4 bits (150), Expect = 6e-08
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLK----SNAIPSAAWALANIVNLASTQSSGH--SGQFISKLNCKD 220
I +++I +MS +D LK S AIP AWALAN + L + + + G L+
Sbjct: 333 ILRDNILKEMSEMDQLKILHSSKAIPPVAWALANTICLVTGDENDYVEPGGLNQGLDYAV 392
Query: 221 YTLSLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEK 400
Y + + NL W+D T KEN+ Y + + + + KA+ I + TC+ K
Sbjct: 393 YVHVVIILAENLLSWLDDGGWTEKENQ----YAQVIAETSAEPFGKALCEI--ETTCALK 446
Query: 401 AQSLIEYLRPFQMQWHLCQLLS 466
+ + LRP QWHL +LL+
Sbjct: 447 -MTYVSLLRPVCQQWHLTKLLA 467
>gb|EMJ05873.1| hypothetical protein PRUPE_ppa000451mg [Prunus persica]
Length = 1167
Score = 57.8 bits (138), Expect(2) = 4e-07
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 56 QISKESIFLKMSRLDVLKSNAIPSAAWALANIVNLAS--TQSSGHSGQFISKLNCKDYTL 229
+I KE + + S++D L IP A WALANI+ LA+ S G F L+ Y
Sbjct: 334 KILKEMLDVDQSKMDFLPK-VIPPAGWALANIICLATGAENDSVDPGGFHQDLDSVSYVR 392
Query: 230 SLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEKAQS 409
++ + NL ++ N VKEN+ NLQ E E A + S K S
Sbjct: 393 AVNILAENLLSRLE-NVDCVKENQ-------NLQGEVETHEKPTHAALCEGEMGSFK-MS 443
Query: 410 LIEYLRPFQMQWHLCQLLSSMEE 478
++ RP QWHL LL+ M++
Sbjct: 444 YLDMFRPISQQWHLTDLLAIMDK 466
Score = 21.6 bits (44), Expect(2) = 4e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 1 AFQHSSIFSTCLNILMVMAD 60
A +H SI S C L+++ +
Sbjct: 314 AMRHKSILSPCFQTLLILKE 333
>gb|AFW67974.1| hypothetical protein ZEAMMB73_560135 [Zea mays]
Length = 1156
Score = 58.9 bits (141), Expect = 7e-07
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLKSNA--IPSAAWALANIVNLASTQSS-GHSGQFISKLNCKDYTL 229
ISK+ IF ++ +L+ + +A IP + WAL NIVNLA+ +SG FI +L+ Y
Sbjct: 327 ISKDKIFEEIIKLEQSEVSASIIPCSGWALGNIVNLATNHDDLSNSGCFIQELDFCLYVD 386
Query: 230 SLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEKAQS 409
+ CI NL + ++ T + +I + + AE ED ++ C +
Sbjct: 387 VINCISENLLESFEKSKGTSQNVGNITFHADTSVAEEED----------TNDDCRMRT-L 435
Query: 410 LIEYLRPFQMQWHLCQLLSSMEEE 481
++ L+P QWHL +LL +E+
Sbjct: 436 FMDLLKPIYQQWHLRKLLMLAKED 459
>ref|XP_002284049.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 [Vitis vinifera]
gi|297740027|emb|CBI30209.3| unnamed protein product
[Vitis vinifera]
Length = 1161
Score = 56.6 bits (135), Expect(2) = 1e-06
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLK----SNAIPSAAWALANIVNLA--STQSSGHSGQFISKLNCKD 220
I ++ I +MS + + S A+P +WALAN++ LA S GQF LN
Sbjct: 327 ILRKKILKEMSEMHPFQIPHCSKAVPQVSWALANVICLATGSENDCVDQGQFTQGLNHTS 386
Query: 221 YTLSLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEK 400
Y + + NL W++ K+N++I Q E N + D T
Sbjct: 387 YVHVVNILAENLLDWLEDVGWIRKDNQEI-------QENVETCANPIDIACSPDTTYGPI 439
Query: 401 AQSLIEYLRPFQMQWHLCQLLSSME 475
S ++ RP QWHL +LL+ ++
Sbjct: 440 KMSYMDLFRPVCQQWHLMKLLAILK 464
Score = 21.2 bits (43), Expect(2) = 1e-06
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 1 AFQHSSIFSTCLNILMVM 54
A +H SI S C L+++
Sbjct: 311 AMKHKSILSPCFQTLLIL 328
>gb|EMT10907.1| E3 ubiquitin-protein ligase UPL7 [Aegilops tauschii]
Length = 1337
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Frame = +2
Query: 59 ISKESIFLKMSRLDV-----LKSNAIPSAAWALANIVNLASTQSS-GHSGQFISKLNCKD 220
ISK+ IF ++S+L+ + ++ IP WAL N++ LA+ +SG FI L+C
Sbjct: 503 ISKDKIFEEISKLEQSEVSNVDNSTIPYCGWALGNLITLATEHDDLSNSGCFIQGLDCCL 562
Query: 221 YTLSLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEK 400
Y ++ CI NL + ++ + ID N + TE+ + +++C K
Sbjct: 563 YVDAINCISQNLLKCFEESKGML---HCIDDRATNNTSITEEA--------DTNDSCRTK 611
Query: 401 AQSLIEYLRPFQMQWHLCQLLSSMEEEI 484
++ L+P QWHL +LL +E++
Sbjct: 612 TL-FMDLLKPIYQQWHLRKLLILAKEDV 638
>ref|XP_002528627.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223531916|gb|EEF33730.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 1148
Score = 52.0 bits (123), Expect(2) = 3e-06
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLK----SNAIPSAAWALANIVNLASTQSSG--HSGQFISKLNCKD 220
I +++I +M ++D K S IPS WALANI+ LA+ + G+ L
Sbjct: 328 ILRDNILTEMMQMDHPKMQRSSKVIPSVGWALANIIGLAAGSENDFMDPGRLNQSLEYAF 387
Query: 221 YTLSLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEK 400
Y + + +L W+ ++ T K+N+ PE + A++ E V N + C+ K
Sbjct: 388 YVRVVTILAESLLSWLHGSRWTEKDNQ----CPE-VNADSSAEPVGHVLDEN-ETACALK 441
Query: 401 AQSLIEYLRPFQMQWHLCQLLS 466
+ ++ LRP QWHL +LL+
Sbjct: 442 -MNFVDLLRPASQQWHLKKLLA 462
Score = 24.6 bits (52), Expect(2) = 3e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 1 AFQHSSIFSTCLNILMVMAD 60
A +H SI S CL L+++ D
Sbjct: 312 ALKHKSILSPCLQTLLILRD 331
>ref|XP_004303054.1| PREDICTED: E3 ubiquitin-protein ligase UPL7-like [Fragaria vesca
subsp. vesca]
Length = 1166
Score = 55.8 bits (133), Expect = 6e-06
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 59 ISKESIFLKMSRLDVLK----SNAIPSAAWALANIVNLAS--TQSSGHSGQFISKLNCKD 220
I KE I +M +D K S IP WALANI+ LA+ S G F +L+C
Sbjct: 330 ILKEKILKEMLAVDQSKFHDSSKVIPPVGWALANIICLATGGEYDSVDPGGFHQELDCAS 389
Query: 221 YTLSLCCILNNLAPWIDHNQKTVKENEDIDSYPENLQAETEDEVNKAVARINVDNTCSEK 400
Y ++ + NL + + V+E++D+ S ET ++ + V+ + T
Sbjct: 390 YIHAVNTLAENL---LSRLESVVQESQDLQS-----NVETSEKPSSTVS-YESEMTHGSI 440
Query: 401 AQSLIEYLRPFQMQWHLCQLLS 466
S ++ LRP QWHL LL+
Sbjct: 441 KLSFLDMLRPVSHQWHLTDLLT 462