BLASTX nr result

ID: Ephedra27_contig00021111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00021111
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004490868.1| PREDICTED: double-stranded RNA-binding prote...    61   1e-07
ref|XP_004490867.1| PREDICTED: double-stranded RNA-binding prote...    61   1e-07
gb|ESW13886.1| hypothetical protein PHAVU_008G234500g [Phaseolus...    59   9e-07
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    58   1e-06
ref|XP_003544264.2| PREDICTED: double-stranded RNA-binding prote...    56   4e-06
gb|ESW13885.1| hypothetical protein PHAVU_008G234400g, partial [...    56   4e-06
gb|ABK24361.1| unknown [Picea sitchensis]                              56   4e-06
gb|ESW13884.1| hypothetical protein PHAVU_008G234400g [Phaseolus...    55   7e-06

>ref|XP_004490868.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
           [Cicer arietinum]
          Length = 377

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E +++ G   PVF T NEG+ H PQFR++V V G+ FTSQ T+  ++ +  DA
Sbjct: 27  MHKNRLQEFTQRSGMSFPVFETVNEGQSHAPQFRSTVWVDGMSFTSQLTFFHRKAAEQDA 86

Query: 39  AKLAI 25
           +KLA+
Sbjct: 87  SKLAL 91


>ref|XP_004490867.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
           [Cicer arietinum]
          Length = 384

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E +++ G   PVF T NEG+ H PQFR++V V G+ FTSQ T+  ++ +  DA
Sbjct: 27  MHKNRLQEFTQRSGMSFPVFETVNEGQSHAPQFRSTVWVDGMSFTSQLTFFHRKAAEQDA 86

Query: 39  AKLAI 25
           +KLA+
Sbjct: 87  SKLAL 91


>gb|ESW13886.1| hypothetical protein PHAVU_008G234500g [Phaseolus vulgaris]
          Length = 365

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/65 (41%), Positives = 45/65 (69%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E + + G   PV+ T +EGEPH P+FR++V V G+ +TSQ T+ +K+ +  +A
Sbjct: 42  MYKNRLHEFATRSGIAIPVYQTVSEGEPHNPKFRSTVWVAGISYTSQSTFPQKKAAEQEA 101

Query: 39  AKLAI 25
           ++LA+
Sbjct: 102 SRLAL 106


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 44/68 (64%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E +++   + P++ T NEG PH P+FR++V V G ++TS  T+S ++ +  D 
Sbjct: 13  MYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAEQDV 72

Query: 39  AKLAIIEL 16
           AKLA+  +
Sbjct: 73  AKLALTSI 80


>ref|XP_003544264.2| PREDICTED: double-stranded RNA-binding protein 6-like [Glycine max]
          Length = 459

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/65 (43%), Positives = 43/65 (66%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E + K G   PV+ T NEG+ H P+FR++V V  + +TSQ T+S K+ +  +A
Sbjct: 26  MYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEA 85

Query: 39  AKLAI 25
           A+LA+
Sbjct: 86  ARLAL 90


>gb|ESW13885.1| hypothetical protein PHAVU_008G234400g, partial [Phaseolus
           vulgaris]
          Length = 292

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = -1

Query: 276 LHPNSTPLLARVEW*KLIKMIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHG 97
           L P  +P    V+      M K+ L E ++K     PV+ T NEG+ H P+FR+ V V G
Sbjct: 51  LPPRPSPFPLPVQLFAQQLMHKNRLQEFAQKCNIALPVYQTNNEGQQHAPRFRSKVWVDG 110

Query: 96  LKFTSQQTYSRKRHSHIDAAKLAI 25
           + + SQ T+S ++ +  DAA+LA+
Sbjct: 111 MSYISQSTFSHRKTAEQDAARLAM 134


>gb|ABK24361.1| unknown [Picea sitchensis]
          Length = 346

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/73 (35%), Positives = 48/73 (65%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K  L E ++K+ +  PV+ T NEG+ H+P+F+ +VTV+G ++ S   ++ K+ +   A
Sbjct: 1   MFKGRLQEYTQKNSFPLPVYDTVNEGQDHIPRFKCTVTVNGARYDSPPGFNHKKPAQNAA 60

Query: 39  AKLAIIELGNRGI 1
           A+ A+ +L N+G+
Sbjct: 61  AEAAVKKLVNQGL 73


>gb|ESW13884.1| hypothetical protein PHAVU_008G234400g [Phaseolus vulgaris]
          Length = 223

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/65 (41%), Positives = 42/65 (64%)
 Frame = -1

Query: 219 MIKSVLFEVSKKHGWEAPVFVTENEGEPHLPQFRTSVTVHGLKFTSQQTYSRKRHSHIDA 40
           M K+ L E ++K     PV+ T NEG+ H P+FR+ V V G+ + SQ T+S ++ +  DA
Sbjct: 1   MHKNRLQEFAQKCNIALPVYQTNNEGQQHAPRFRSKVWVDGMSYISQSTFSHRKTAEQDA 60

Query: 39  AKLAI 25
           A+LA+
Sbjct: 61  ARLAM 65


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