BLASTX nr result

ID: Ephedra27_contig00020965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020965
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 248   4e-64
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   247   1e-63
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a...   241   5e-62
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   239   3e-61
gb|AAW30634.1| replicase [Tulip virus X]                              211   8e-53
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   210   1e-52
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   164   1e-38
gb|AAC54780.1| ORF [Cassava common mosaic virus]                      164   1e-38
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548...   158   6e-37
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082...   155   7e-36
gb|ACS28233.1| replicase [Alternanthera mosaic virus]                 155   7e-36
gb|ACS28228.1| replicase [Alternanthera mosaic virus]                 154   9e-36
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai...   154   9e-36
ref|YP_054402.1| replication-associated protein [Zygocactus viru...   150   2e-34

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  248 bits (634), Expect = 4e-64
 Identities = 118/125 (94%), Positives = 124/125 (99%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRTLKRELAQTRHTNPFAQSPDAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHVEPKDVPRYPQDTV++RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHVEPKDVPRYPQDTVLNRLE 138

Query: 17  NIPTS 3
           NI TS
Sbjct: 139 NISTS 143


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  247 bits (631), Expect = 1e-63
 Identities = 119/125 (95%), Positives = 121/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138

Query: 17  NIPTS 3
           NIPTS
Sbjct: 139 NIPTS 143


>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score =  241 bits (616), Expect = 5e-62
 Identities = 115/125 (92%), Positives = 120/125 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHPYAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I RLE
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIKRLE 138

Query: 17  NIPTS 3
           NIPT+
Sbjct: 139 NIPTN 143


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
           gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
           replication protein; AltName: Full=156 kDa protein;
           AltName: Full=ORF1 protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
           [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  239 bits (610), Expect = 3e-61
 Identities = 114/124 (91%), Positives = 120/124 (96%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHPYAIT HTHAAAKAIESDL
Sbjct: 19  VIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHPYAITSHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHVEPKDVPRYPQ+T+I+RL 
Sbjct: 79  YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHVEPKDVPRYPQETIINRLA 138

Query: 17  NIPT 6
           +IPT
Sbjct: 139 DIPT 142


>gb|AAW30634.1| replicase [Tulip virus X]
          Length = 144

 Score =  211 bits (537), Expect = 8e-53
 Identities = 99/124 (79%), Positives = 108/124 (87%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR +K+EL  TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDL
Sbjct: 7   VIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDL 66

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEV SHYLPKENP++FLFMKP+KLR+FHRGP H D FLNAH+EPKDVPRYP DTV+S L 
Sbjct: 67  YEVTSHYLPKENPITFLFMKPSKLRYFHRGPQHHDIFLNAHIEPKDVPRYPIDTVVSSLP 126

Query: 17  NIPT 6
            I T
Sbjct: 127 AITT 130


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
           gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
           [Tulip virus X]
          Length = 1361

 Score =  210 bits (535), Expect = 1e-52
 Identities = 98/124 (79%), Positives = 107/124 (86%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQDEAYR +K+EL  TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDL
Sbjct: 19  VIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           YEV SHYLPKENPV+FLFMKP+KLR+FHRGP H D FLNA++EPKDVPRYP DTVI  + 
Sbjct: 79  YEVTSHYLPKENPVTFLFMKPSKLRYFHRGPQHSDIFLNAYIEPKDVPRYPTDTVIENIS 138

Query: 17  NIPT 6
            I T
Sbjct: 139 EITT 142


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
           gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
           RNA polymerase [Cassava common mosaic virus]
           gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  164 bits (414), Expect = 1e-38
 Identities = 76/125 (60%), Positives = 97/125 (77%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQD++YRT+K EL Q +  NP+AQT EAAD LE LG+ +HPYAI  HTHAA KA+E DL
Sbjct: 19  VIQDDSYRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           Y  VSHYLP+++PV+F+FMKPAKL++  RGP H D F+N+ VEPKD+ RYP+ TV+  + 
Sbjct: 79  YHSVSHYLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIP 138

Query: 17  NIPTS 3
            I TS
Sbjct: 139 PIQTS 143


>gb|AAC54780.1| ORF [Cassava common mosaic virus]
          Length = 300

 Score =  164 bits (414), Expect = 1e-38
 Identities = 76/125 (60%), Positives = 97/125 (77%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQD++YRT+K EL Q +  NP+AQT EAAD LE LG+ +HPYAI  HTHAA KA+E DL
Sbjct: 19  VIQDDSYRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           Y  VSHYLP+++PV+F+FMKPAKL++  RGP H D F+N+ VEPKD+ RYP+ TV+  + 
Sbjct: 79  YHSVSHYLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIP 138

Query: 17  NIPTS 3
            I TS
Sbjct: 139 PIQTS 143


>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
           replicase [Tamus red mosaic virus]
          Length = 1501

 Score =  158 bits (400), Expect = 6e-37
 Identities = 78/125 (62%), Positives = 94/125 (75%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+E Y+ L++ L+ T  +NP+A    AA+ LE LGINS+P+A T HTH+AAKAIE+DL
Sbjct: 19  VIQNEQYQHLRKTLSHTATTNPYAIAESAANVLEDLGINSNPFATTAHTHSAAKAIENDL 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           Y   S  LPKENPVSFLFMKPAKLRFFHRGP H D F+N  VEPKDV RY  DT++S L 
Sbjct: 79  YFSASSLLPKENPVSFLFMKPAKLRFFHRGPQHNDHFINKVVEPKDVARYDPDTLVSSLP 138

Query: 17  NIPTS 3
            + TS
Sbjct: 139 TLSTS 143


>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
           replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  155 bits (391), Expect = 7e-36
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+EAYR +K+ +A+T+  NP+AQ P AAD+LE LGI S+P+++  HTHAAAK+IE D+
Sbjct: 19  VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
           Y++  + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79  YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWIEPKDVTRY 128


>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  155 bits (391), Expect = 7e-36
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+EAYR +K+ +A+T+  NP+AQ P AAD+LE LGI S+P+++  HTHAAAK+IE D+
Sbjct: 19  VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
           Y++  + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79  YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWIEPKDVTRY 128


>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  154 bits (390), Expect = 9e-36
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+EAYR +K+ +A+T+  NP+AQ P AAD+LE LGI S+P+++  HTHAAAK+IE D+
Sbjct: 19  VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
           Y++  + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79  YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRY 128


>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
          Length = 1541

 Score =  154 bits (390), Expect = 9e-36
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+EAYR +K+ +A+T+  NP+AQ P AAD+LE LGI S+P+++  HTHAAAK+IE D+
Sbjct: 19  VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
           Y++  + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79  YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRY 128


>ref|YP_054402.1| replication-associated protein [Zygocactus virus X]
           gi|38146347|gb|AAR11542.1| replication-associated
           protein [Zygocactus virus X]
          Length = 1543

 Score =  150 bits (379), Expect = 2e-34
 Identities = 67/123 (54%), Positives = 92/123 (74%)
 Frame = -1

Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
           VIQ+EAY+T++ +L      NP+AQ  +AAD LE LGI ++P A+  HTH AAKAIE+D+
Sbjct: 19  VIQEEAYKTIQTQLRLAASINPYAQPADAADVLETLGIITNPLAVEAHTHGAAKAIENDM 78

Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
           Y +V++YLPKENPV+F +MK  KL  F RGP  GD F+N+H EPKD+ RYP++T++  LE
Sbjct: 79  YNIVANYLPKENPVTFYYMKKGKLGKFRRGPQQGDLFVNSHFEPKDIARYPEETIVEHLE 138

Query: 17  NIP 9
           + P
Sbjct: 139 SKP 141


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