BLASTX nr result
ID: Ephedra27_contig00020965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00020965
(377 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 248 4e-64
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 247 1e-63
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 241 5e-62
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 239 3e-61
gb|AAW30634.1| replicase [Tulip virus X] 211 8e-53
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 210 1e-52
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 164 1e-38
gb|AAC54780.1| ORF [Cassava common mosaic virus] 164 1e-38
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 158 6e-37
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 155 7e-36
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 155 7e-36
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 154 9e-36
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 154 9e-36
ref|YP_054402.1| replication-associated protein [Zygocactus viru... 150 2e-34
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 248 bits (634), Expect = 4e-64
Identities = 118/125 (94%), Positives = 124/125 (99%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRTLKRELAQTRHTNPFAQSPDAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHVEPKDVPRYPQDTV++RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHVEPKDVPRYPQDTVLNRLE 138
Query: 17 NIPTS 3
NI TS
Sbjct: 139 NISTS 143
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 247 bits (631), Expect = 1e-63
Identities = 119/125 (95%), Positives = 121/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLE 138
Query: 17 NIPTS 3
NIPTS
Sbjct: 139 NIPTS 143
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 241 bits (616), Expect = 5e-62
Identities = 115/125 (92%), Positives = 120/125 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHPYAITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHPYAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I RLE
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIKRLE 138
Query: 17 NIPTS 3
NIPT+
Sbjct: 139 NIPTN 143
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 239 bits (610), Expect = 3e-61
Identities = 114/124 (91%), Positives = 120/124 (96%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHPYAIT HTHAAAKAIESDL
Sbjct: 19 VIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHPYAITSHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHVEPKDVPRYPQ+T+I+RL
Sbjct: 79 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHVEPKDVPRYPQETIINRLA 138
Query: 17 NIPT 6
+IPT
Sbjct: 139 DIPT 142
>gb|AAW30634.1| replicase [Tulip virus X]
Length = 144
Score = 211 bits (537), Expect = 8e-53
Identities = 99/124 (79%), Positives = 108/124 (87%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR +K+EL TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDL
Sbjct: 7 VIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDL 66
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEV SHYLPKENP++FLFMKP+KLR+FHRGP H D FLNAH+EPKDVPRYP DTV+S L
Sbjct: 67 YEVTSHYLPKENPITFLFMKPSKLRYFHRGPQHHDIFLNAHIEPKDVPRYPIDTVVSSLP 126
Query: 17 NIPT 6
I T
Sbjct: 127 AITT 130
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 210 bits (535), Expect = 1e-52
Identities = 98/124 (79%), Positives = 107/124 (86%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQDEAYR +K+EL TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDL
Sbjct: 19 VIQDEAYRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
YEV SHYLPKENPV+FLFMKP+KLR+FHRGP H D FLNA++EPKDVPRYP DTVI +
Sbjct: 79 YEVTSHYLPKENPVTFLFMKPSKLRYFHRGPQHSDIFLNAYIEPKDVPRYPTDTVIENIS 138
Query: 17 NIPT 6
I T
Sbjct: 139 EITT 142
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 164 bits (414), Expect = 1e-38
Identities = 76/125 (60%), Positives = 97/125 (77%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQD++YRT+K EL Q + NP+AQT EAAD LE LG+ +HPYAI HTHAA KA+E DL
Sbjct: 19 VIQDDSYRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
Y VSHYLP+++PV+F+FMKPAKL++ RGP H D F+N+ VEPKD+ RYP+ TV+ +
Sbjct: 79 YHSVSHYLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIP 138
Query: 17 NIPTS 3
I TS
Sbjct: 139 PIQTS 143
>gb|AAC54780.1| ORF [Cassava common mosaic virus]
Length = 300
Score = 164 bits (414), Expect = 1e-38
Identities = 76/125 (60%), Positives = 97/125 (77%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQD++YRT+K EL Q + NP+AQT EAAD LE LG+ +HPYAI HTHAA KA+E DL
Sbjct: 19 VIQDDSYRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
Y VSHYLP+++PV+F+FMKPAKL++ RGP H D F+N+ VEPKD+ RYP+ TV+ +
Sbjct: 79 YHSVSHYLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIP 138
Query: 17 NIPTS 3
I TS
Sbjct: 139 PIQTS 143
>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
replicase [Tamus red mosaic virus]
Length = 1501
Score = 158 bits (400), Expect = 6e-37
Identities = 78/125 (62%), Positives = 94/125 (75%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+E Y+ L++ L+ T +NP+A AA+ LE LGINS+P+A T HTH+AAKAIE+DL
Sbjct: 19 VIQNEQYQHLRKTLSHTATTNPYAIAESAANVLEDLGINSNPFATTAHTHSAAKAIENDL 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
Y S LPKENPVSFLFMKPAKLRFFHRGP H D F+N VEPKDV RY DT++S L
Sbjct: 79 YFSASSLLPKENPVSFLFMKPAKLRFFHRGPQHNDHFINKVVEPKDVARYDPDTLVSSLP 138
Query: 17 NIPTS 3
+ TS
Sbjct: 139 TLSTS 143
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 155 bits (391), Expect = 7e-36
Identities = 68/110 (61%), Positives = 91/110 (82%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+EAYR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+
Sbjct: 19 VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
Y++ + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79 YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWIEPKDVTRY 128
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 155 bits (391), Expect = 7e-36
Identities = 68/110 (61%), Positives = 91/110 (82%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+EAYR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+
Sbjct: 19 VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
Y++ + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79 YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWIEPKDVTRY 128
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 154 bits (390), Expect = 9e-36
Identities = 68/110 (61%), Positives = 91/110 (82%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+EAYR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+
Sbjct: 19 VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
Y++ + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79 YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRY 128
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 154 bits (390), Expect = 9e-36
Identities = 68/110 (61%), Positives = 91/110 (82%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+EAYR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+
Sbjct: 19 VIQEEAYREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDM 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRY 48
Y++ + LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY
Sbjct: 79 YKITGYSLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRY 128
>ref|YP_054402.1| replication-associated protein [Zygocactus virus X]
gi|38146347|gb|AAR11542.1| replication-associated
protein [Zygocactus virus X]
Length = 1543
Score = 150 bits (379), Expect = 2e-34
Identities = 67/123 (54%), Positives = 92/123 (74%)
Frame = -1
Query: 377 VIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDL 198
VIQ+EAY+T++ +L NP+AQ +AAD LE LGI ++P A+ HTH AAKAIE+D+
Sbjct: 19 VIQEEAYKTIQTQLRLAASINPYAQPADAADVLETLGIITNPLAVEAHTHGAAKAIENDM 78
Query: 197 YEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLE 18
Y +V++YLPKENPV+F +MK KL F RGP GD F+N+H EPKD+ RYP++T++ LE
Sbjct: 79 YNIVANYLPKENPVTFYYMKKGKLGKFRRGPQQGDLFVNSHFEPKDIARYPEETIVEHLE 138
Query: 17 NIP 9
+ P
Sbjct: 139 SKP 141