BLASTX nr result
ID: Ephedra27_contig00020888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00020888
(1363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76485.1| unknown [Picea sitchensis] 380 e-103
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l... 338 3e-90
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu... 336 2e-89
emb|CBI29839.3| unnamed protein product [Vitis vinifera] 331 4e-88
gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma c... 327 5e-87
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ... 327 5e-87
ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-l... 325 2e-86
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l... 323 1e-85
ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-l... 321 5e-85
ref|XP_002308947.1| 3' exoribonuclease domain 1-containing famil... 320 7e-85
gb|ESW05464.1| hypothetical protein PHAVU_011G181200g [Phaseolus... 319 2e-84
ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-l... 318 3e-84
ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citr... 317 7e-84
ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-l... 316 1e-83
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu... 316 2e-83
ref|XP_004241263.1| PREDICTED: exosome complex component RRP43-l... 316 2e-83
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil... 314 6e-83
gb|EMJ03572.1| hypothetical protein PRUPE_ppa009278mg [Prunus pe... 313 1e-82
ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like prote... 312 2e-82
ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-l... 311 5e-82
>gb|ADE76485.1| unknown [Picea sitchensis]
Length = 302
Score = 380 bits (975), Expect = e-103
Identities = 194/300 (64%), Positives = 235/300 (78%), Gaps = 3/300 (1%)
Frame = +1
Query: 190 MAMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 369
MA + + ++E+EAFRRLYP QFYE++L+ NVRPDARPL RAR T L LGTV T+DGSA
Sbjct: 1 MASQAALAGEIEVEAFRRLYPLQFYERHLNDNVRPDARPLGRARATSLALGTVPTADGSA 60
Query: 370 MAKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQL 549
MAKIG+T MLAGVKLEVMTP+ E+ +EGRI VDFQMPPICSP VRPG+P+D A +ISEQL
Sbjct: 61 MAKIGHTTMLAGVKLEVMTPAAEALDEGRIAVDFQMPPICSPDVRPGRPVDAAAVISEQL 120
Query: 550 SNVLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVS 729
SNVL+SSG +NL+ELSISKG+AAWMAYLDI C+DADG++FD R PAVS
Sbjct: 121 SNVLASSGVINLKELSISKGQAAWMAYLDIYCLDADGALFDAALLAAIGAFAHLRFPAVS 180
Query: 730 MTEEGKVIPISDNNNVEDG---EQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEE 900
MTEEGKVIP+S + +EDG + Q Q + LTL +PFSLTC+LYK ++LADP AEEE
Sbjct: 181 MTEEGKVIPLSGDTVLEDGNKEQPKVQEQRQQLTLGKVPFSLTCMLYKKHILADPTAEEE 240
Query: 901 RILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMD 1080
+ QT ITVVLD SG+LVSFYKPGG+ALAS + CV+ K RVKEL+ IL EAL++M+
Sbjct: 241 SVFQTTITVVLDPSGRLVSFYKPGGSALASTSTIQDCVALTKYRVKELQKILDEALSEME 300
>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
Length = 303
Score = 338 bits (867), Expect = 3e-90
Identities = 163/301 (54%), Positives = 224/301 (74%), Gaps = 1/301 (0%)
Frame = +1
Query: 184 IAMAMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDG 363
++ + ++ ++E++AFRRL+P +++E++L ++RPDARPL RAR+T L LG VA++DG
Sbjct: 2 VSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADG 61
Query: 364 SAMAKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISE 543
SA+AKIG T MLA VK+EVMTP +ESP+EG I ++F MPPICSP VRPG+P +EA ++S+
Sbjct: 62 SALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSK 121
Query: 544 QLSNVLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPA 723
QLS+ + SSG +NL+ELS+ GKAAWMAYLDI C+DADGS+FD RIP
Sbjct: 122 QLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPV 181
Query: 724 VSMTEEGKVIPISDNNNVEDGE-QTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEE 900
VS+ EEG+V+ +S+ N E + ++ LTL ++PFSLTC+L+KNY+LADP AEEE
Sbjct: 182 VSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYILADPTAEEE 241
Query: 901 RILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMD 1080
I++T +TVVLDSSG+LVS YKPGG LA V C++ + RVKELK IL EA++ M+
Sbjct: 242 SIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSILNEAISDME 301
Query: 1081 V 1083
V
Sbjct: 302 V 302
>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
gi|550335486|gb|ERP58806.1| hypothetical protein
POPTR_0006s04970g [Populus trichocarpa]
Length = 303
Score = 336 bits (861), Expect = 2e-89
Identities = 160/294 (54%), Positives = 225/294 (76%), Gaps = 1/294 (0%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESPEEG I +DF MPPICSP VRPG+P + A +IS+QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIS 128
Query: 565 SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEG 744
SSG +NL+ELS+ GKAAWMAYLDI C+DADG++FD +IP VS+ ++G
Sbjct: 129 SSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHLQIPIVSLNDDG 188
Query: 745 KVIPIS-DNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFI 921
K++ +S +++ + E+ +++ LTL +IPFSLTC+L+KNY+LADP AEEE I++T +
Sbjct: 189 KIVLVSEEDDGTKLEEEPVNKEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLV 248
Query: 922 TVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
TVVLDSS +LVSFYKPGG LA V CV+ + RVKEL+ IL E ++ M++
Sbjct: 249 TVVLDSSSRLVSFYKPGGPVLAQTSAVQDCVALTRQRVKELQDILDETISGMEI 302
>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 331 bits (849), Expect = 4e-88
Identities = 164/309 (53%), Positives = 224/309 (72%), Gaps = 9/309 (2%)
Frame = +1
Query: 184 IAMAMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDG 363
++ + ++ ++E++AFRRL+P +++E++L ++RPDARPL RAR+T L LG VA++DG
Sbjct: 2 VSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADG 61
Query: 364 SAMAKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISE 543
SA+AKIG T MLA VK+EVMTP +ESP+EG I ++F MPPICSP VRPG+P +EA ++S+
Sbjct: 62 SALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSK 121
Query: 544 QLSN--------VLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXX 699
QLS+ V S SG +NL+ELS+ GKAAWMAYLDI C+DADGS+FD
Sbjct: 122 QLSDTILRHVNVVTSFSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAA 181
Query: 700 XXXXRIPAVSMTEEGKVIPISDNNNVEDGE-QTCQSQEKCLTLLNIPFSLTCVLYKNYLL 876
RIP VS+ EEG+V+ +S+ N E + ++ LTL ++PFSLTC+L+KNY+L
Sbjct: 182 FSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYIL 241
Query: 877 ADPNAEEERILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGIL 1056
ADP AEEE I++T +TVVLDSSG+LVS YKPGG LA V C++ + RVKELK IL
Sbjct: 242 ADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSIL 301
Query: 1057 AEALAQMDV 1083
EA++ M+V
Sbjct: 302 NEAISDMEV 310
>gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma cacao]
Length = 302
Score = 327 bits (839), Expect = 5e-87
Identities = 152/293 (51%), Positives = 219/293 (74%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +FYEK+LS+++RPDARPL RAR+T + LG VA+++GSA+AKIG
Sbjct: 9 DLSTEVEVDAFRRLFPLRFYEKHLSESIRPDARPLGRARDTTIALGAVASANGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS E+P+EG + +DF MPPICSP VRPG+P + A ++S+QLS+ +
Sbjct: 69 STTMLAAIKMEVMTPSTETPDEGCVAIDFHMPPICSPIVRPGRPAEAAPVVSKQLSDTIL 128
Query: 565 SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEG 744
SSG ++L+EL + GKAAWMAYLDI C+DADG++FD IP VS+ ++G
Sbjct: 129 SSGMISLKELCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLEIPVVSLNDDG 188
Query: 745 KVIPISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFIT 924
K++ +S+ + +++ LTL +IPFSLTC+L+KNY+LADP AEEE I++T +T
Sbjct: 189 KIVLLSEEQEGMSEREPVNKEKRKLTLCSIPFSLTCILHKNYILADPTAEEESIMETLVT 248
Query: 925 VVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+VLDSS +LVS YKPGG LA + C++ + RVKEL+ IL EA++ M+V
Sbjct: 249 IVLDSSSQLVSLYKPGGPVLAYTSAIQDCIAITRQRVKELQKILEEAISVMEV 301
>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
gi|223528261|gb|EEF30313.1| exosome complex exonuclease
rrp43, putative [Ricinus communis]
Length = 303
Score = 327 bits (839), Expect = 5e-87
Identities = 160/297 (53%), Positives = 219/297 (73%), Gaps = 1/297 (0%)
Frame = +1
Query: 196 MGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMA 375
+ ++ ++E +AFRRL+P F+E++L++++RPD R L RAR+T L LG V ++DGSA+A
Sbjct: 6 VSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSADGSAIA 65
Query: 376 KIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSN 555
KIG+T M+A +K+EVMTPS ESP+EG I +DF MPPICSP VRPG+P + A ++S+QLS+
Sbjct: 66 KIGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVSKQLSD 125
Query: 556 VLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMT 735
+ SS ++L+ELS+ GKAAWMAYLDI C+DADGS+FD +IP VS+
Sbjct: 126 TIMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNLQIPIVSLN 185
Query: 736 EEGKVIPISDNNNVEDGEQTCQSQEK-CLTLLNIPFSLTCVLYKNYLLADPNAEEERILQ 912
++GKV+ +SD N E+ ++EK LTL ++PFSLTCVL+KNY+LADP AEEE I++
Sbjct: 186 DDGKVVVVSDENEGGKREKEAVNKEKRKLTLRSLPFSLTCVLHKNYILADPTAEEESIME 245
Query: 913 TFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
T +TVVLDSS +LVSFYKPGG LA V CV+ + RVKEL+ IL EAL+ M +
Sbjct: 246 TLVTVVLDSSARLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELQNILDEALSGMQI 302
>ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 300
Score = 325 bits (834), Expect = 2e-86
Identities = 158/289 (54%), Positives = 215/289 (74%)
Frame = +1
Query: 217 DLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIGNTAM 396
+L+++AFRRL+P +FYE +L ++ RPD R L +ARET LG VA++DGSA+ KIG+T M
Sbjct: 13 ELDVDAFRRLFPLRFYESHLVKSTRPDGRSLDKARETSSALGAVASADGSALVKIGSTTM 72
Query: 397 LAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLSSSGF 576
LA +K+EV TPS+E P+EGRI ++F MPPICSP VRPG+P + A ++S+QLS+ +SSSG
Sbjct: 73 LAAIKMEVTTPSQELPDEGRIAIEFHMPPICSPIVRPGRPAEAAPVVSKQLSDTISSSGM 132
Query: 577 VNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEGKVIP 756
+N++ELS+ GKAAWM YLDI C+DADG++FD +IP VSM EGKV+
Sbjct: 133 INVKELSLISGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSHLQIPVVSMNNEGKVVV 192
Query: 757 ISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFITVVLD 936
+S+ N E G++ +++ LTL +IPFSLTC+LYKN++LADP AEEE I++T +TVVLD
Sbjct: 193 MSEEN--EGGKEPVNKEKRKLTLCSIPFSLTCILYKNFILADPTAEEESIMETLVTVVLD 250
Query: 937 SSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
SSG+LVS YKPGG LA + CV+ + RV+EL+ IL EA A M+V
Sbjct: 251 SSGQLVSLYKPGGPVLAYTSAIQDCVALTRQRVRELQMILDEASAGMEV 299
>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
complex component RRP43-like [Cucumis sativus]
Length = 304
Score = 323 bits (827), Expect = 1e-85
Identities = 155/298 (52%), Positives = 222/298 (74%), Gaps = 1/298 (0%)
Frame = +1
Query: 193 AMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAM 372
A ++ +E++AFRRL+P QFYE++L++++RPD R L +AR+T + LG V++++GSA+
Sbjct: 6 AASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSAL 65
Query: 373 AKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLS 552
AKIG+T MLA +K+EVMTPS ESP+EG I +DF MPP+CSP VRPG+P + A +IS+QLS
Sbjct: 66 AKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQLS 125
Query: 553 NVLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSM 732
+ +SSSG ++LRELS+ KGKAAWMAYLDI C+DADGS+FD +IP V++
Sbjct: 126 DTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVAL 185
Query: 733 TEEGKVIPISDNNNVEDGE-QTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERIL 909
++GKV+ + + E+ E + + + L L +IPFSLTC+L+K Y+LADP AEEE ++
Sbjct: 186 NDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVM 245
Query: 910 QTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+T +TVVLDSSG+LVSFYKPGG+ LA V C++ + R KEL+ IL EA++ M++
Sbjct: 246 ETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGMEI 303
>ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Citrus
sinensis] gi|568873742|ref|XP_006489987.1| PREDICTED:
exosome complex component RRP43-like isoform X2 [Citrus
sinensis]
Length = 302
Score = 321 bits (822), Expect = 5e-85
Identities = 153/294 (52%), Positives = 223/294 (75%), Gaps = 1/294 (0%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +++E++L++++RPDARPL+RAR+T + +G VA++DGSA+AKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLAESIRPDARPLSRARDTTISMGAVASADGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESP+EG + +DF MPPICSP VRPG+P + A ++++QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTIS 128
Query: 565 SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEG 744
SSG +NL+ELS+ GKAAWM YLDI C+DADG++FD +IP VS+ ++G
Sbjct: 129 SSGMINLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPTVSL-DDG 187
Query: 745 KVIPISDNNNVEDGEQTCQSQEK-CLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFI 921
K++ + + E+ E+ ++EK LTL IPFSLTC+L+KNY+LADP +EEE I++T +
Sbjct: 188 KIVMLPEEQKEENSEKEPVNKEKRKLTLGGIPFSLTCILHKNYILADPTSEEESIMETLV 247
Query: 922 TVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
TVVLDSS +LVS YKPGG LA V C++ + RVKEL IL EA++ M++
Sbjct: 248 TVVLDSSNQLVSLYKPGGAVLAYTSAVQDCIALTRQRVKELHQILEEAISGMEI 301
>ref|XP_002308947.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222854923|gb|EEE92470.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 318
Score = 320 bits (821), Expect = 7e-85
Identities = 159/309 (51%), Positives = 225/309 (72%), Gaps = 16/309 (5%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESPEEG I +DF MPPICSP VRPG+P + A +IS+QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIS 128
Query: 565 ---SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFD------------XXXXXXXXX 699
+SG +NL+ELS+ GKAAWMAYLDI C+DADG++FD
Sbjct: 129 RQVNSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHSAFIYYRSL 188
Query: 700 XXXXRIPAVSMTEEGKVIPIS-DNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLL 876
+IP VS+ ++GK++ +S +++ + E+ +++ LTL +IPFSLTC+L+KNY+L
Sbjct: 189 ICAVQIPIVSLNDDGKIVLVSEEDDGTKLEEEPVNKEKRKLTLSSIPFSLTCILHKNYIL 248
Query: 877 ADPNAEEERILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGIL 1056
ADP AEEE I++T +TVVLDSS +LVSFYKPGG LA V CV+ + RVKEL+ IL
Sbjct: 249 ADPTAEEESIMETLVTVVLDSSSRLVSFYKPGGPVLAQTSAVQDCVALTRQRVKELQDIL 308
Query: 1057 AEALAQMDV 1083
E ++ M++
Sbjct: 309 DETISGMEI 317
>gb|ESW05464.1| hypothetical protein PHAVU_011G181200g [Phaseolus vulgaris]
Length = 301
Score = 319 bits (817), Expect = 2e-84
Identities = 147/293 (50%), Positives = 220/293 (75%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +++E++L++++RPD RPL +ARET + LG V+T+ GSA+ KIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVSTAHGSALVKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA VK+EVM+PS ESP+EG + VDF MPPICSP VRPG+P + + ++S+QLS+ +S
Sbjct: 69 STTMLAAVKMEVMSPSLESPDEGCLAVDFFMPPICSPIVRPGRPAEASPVVSKQLSDTIS 128
Query: 565 SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEG 744
SS ++L+ELS+ GKAAWM YLDI C+DADGS++D +IPAV+M ++G
Sbjct: 129 SSKMIDLKELSLVSGKAAWMTYLDIYCLDADGSLYDAALLSAVAALSHLQIPAVAMNDDG 188
Query: 745 KVIPISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFIT 924
K++ +SD + + ++ +++ LTL +IPFSLTC+L+KNY+LADP AEEE I++T +T
Sbjct: 189 KIVLVSDEDGQKRAQEPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIVETHLT 248
Query: 925 VVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+VLD+SG+L+S YKPGG LA + CV+ + RVKELK +L + + M+V
Sbjct: 249 IVLDTSGQLISLYKPGGQVLAYTSAIQDCVALTRQRVKELKSLLDKENSAMEV 301
>ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
max] gi|571509874|ref|XP_006596185.1| PREDICTED: exosome
complex component RRP43-like isoform X4 [Glycine max]
Length = 299
Score = 318 bits (815), Expect = 3e-84
Identities = 154/298 (51%), Positives = 220/298 (73%), Gaps = 4/298 (1%)
Frame = +1
Query: 202 SNMEEDL----ELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 369
SN EDL E++AFRRL+P +++E++L++++RPD RPL +ARET + LG VA+++GSA
Sbjct: 4 SNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSA 63
Query: 370 MAKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQL 549
+ KIG+T ML +K+EVMTPS ESP+EG + +DF MPPICSP VRPG+P + + ++S+QL
Sbjct: 64 LVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQL 123
Query: 550 SNVLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVS 729
S+ +SSS ++L+ELS+ GKAAWMAYLDI C+DADG++FD +IPAV+
Sbjct: 124 SDTISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIPAVA 183
Query: 730 MTEEGKVIPISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERIL 909
M ++GK++ +S EDG++ +++ LTL +IPFSLTC+L+KNY+LADP AEEE I+
Sbjct: 184 MNDDGKIVLVSG----EDGQKPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIM 239
Query: 910 QTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+T +T+VLD+SG+L+S YKPGG ALA + CV RVKELK L + + M+V
Sbjct: 240 ETHVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYLDKENSAMEV 297
>ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citrus clementina]
gi|567857414|ref|XP_006421390.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523262|gb|ESR34629.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523263|gb|ESR34630.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
Length = 302
Score = 317 bits (812), Expect = 7e-84
Identities = 152/294 (51%), Positives = 221/294 (75%), Gaps = 1/294 (0%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFRRL+P +++E++L++++RPDAR L+RAR T + +G VA++DGSA+AKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLAESIRPDARSLSRARNTTISMGAVASADGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESP+EG + +DF MPPICSP VRPG+P + A ++++QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTIS 128
Query: 565 SSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEG 744
SSG +NL+ELS+ GKAAWM YLDI C+DADG++FD +IP VS+ ++G
Sbjct: 129 SSGMINLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPTVSL-DDG 187
Query: 745 KVIPISDNNNVEDGEQTCQSQEK-CLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFI 921
K++ + + E+ E+ ++EK LTL IPFSLTC+L+KNY+LADP +EEE I++T +
Sbjct: 188 KIVMLPEEQKEENSEKEPVNKEKRKLTLGGIPFSLTCILHKNYILADPTSEEESIMETLV 247
Query: 922 TVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
TVVLDSS +LVS YKPGG LA V C++ + RVKEL IL EA++ M++
Sbjct: 248 TVVLDSSNQLVSLYKPGGAVLAYTSAVQDCIALTRQRVKELHQILEEAISGMEI 301
>ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 302
Score = 316 bits (810), Expect = 1e-83
Identities = 144/296 (48%), Positives = 220/296 (74%)
Frame = +1
Query: 196 MGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMA 375
+ ++ ++E++AFRRL+P +++E++L++++RPD RPL +ARET + LG VA+++GSA+
Sbjct: 6 VSEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALV 65
Query: 376 KIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSN 555
KIG+T +L +K+EVMTPS ESP+EG + +DF MPPICSP VRPG+P + + ++S+QLS+
Sbjct: 66 KIGSTTILTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSD 125
Query: 556 VLSSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMT 735
+SSS ++L+ELS+ GKAAWMAYLDI C+DADG++FD +IP V+M
Sbjct: 126 TISSSKMIDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVASLSHLQIPVVAMN 185
Query: 736 EEGKVIPISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQT 915
++GK++ +S+ + + ++ +++ LTL +IPFSLTC+L+KNY+LADP AEEE I++T
Sbjct: 186 DDGKIVLVSEEDGQKREQEPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIMET 245
Query: 916 FITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+TVVLD+SG+L+S YKPGG LA + C + + RVKELK L +A + M+V
Sbjct: 246 HVTVVLDTSGQLISLYKPGGPVLAYTSAIQDCAALTRQRVKELKSFLDKANSAMEV 301
>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
gi|550320907|gb|ERP51579.1| hypothetical protein
POPTR_0016s05590g [Populus trichocarpa]
Length = 323
Score = 316 bits (809), Expect = 2e-83
Identities = 159/313 (50%), Positives = 222/313 (70%), Gaps = 21/313 (6%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFR L+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9 DLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESP+EG I +DF MPPICSP VRPG+P + A +IS+QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIS 128
Query: 565 S--------------------SGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXX 684
SG +NL+ELS+ GKAAWMAYLDI C+DADG++FD
Sbjct: 129 RQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALL 188
Query: 685 XXXXXXXXXRIPAVSMTEEGKVIPISDNNNVEDGEQTCQSQEK-CLTLLNIPFSLTCVLY 861
+IP VS+ ++GK++ +S+ + E+ ++EK LTL +IPFSLTC+L+
Sbjct: 189 SAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLSSIPFSLTCILH 248
Query: 862 KNYLLADPNAEEERILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKE 1041
KNY+LADP AEEE I++T +TVVLDSS +LVSFYKPGG+ A V CV+ + RVKE
Sbjct: 249 KNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGSVFAYTSAVKDCVALTRQRVKE 308
Query: 1042 LKGILAEALAQMD 1080
L+ IL EA++ M+
Sbjct: 309 LQEILDEAISGME 321
>ref|XP_004241263.1| PREDICTED: exosome complex component RRP43-like [Solanum
lycopersicum]
Length = 303
Score = 316 bits (809), Expect = 2e-83
Identities = 154/295 (52%), Positives = 221/295 (74%), Gaps = 1/295 (0%)
Frame = +1
Query: 202 SNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKI 381
S++ ++E++AFRRL+P +++E++L ++VRPDAR L AR+T L LG VA+++GSA+AKI
Sbjct: 8 SDLYSEMEVDAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTLALGAVASAEGSALAKI 67
Query: 382 GNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVL 561
G+T MLA +K+E+MTP+ E P+EG I ++F MPPICSP VRPG+P + A +IS+QLS+ +
Sbjct: 68 GSTTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISKQLSDTI 127
Query: 562 SSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEE 741
SSG ++L+EL + GKAAWMAYLDI C+DADGS+FD IP VS+ E+
Sbjct: 128 LSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGSLFDAALLSAVAAFSHLNIPVVSLNED 187
Query: 742 GKVIPIS-DNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTF 918
G+++ +S DNN ++ +Q ++++ L L + PFSLTC+L+KNY+LADP AEEE I++T
Sbjct: 188 GRIVLVSEDNNQLKLEKQPVNTEKRKLKLNSPPFSLTCLLHKNYILADPTAEEESIMETA 247
Query: 919 ITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+TVVLDSS +LVS YKPGG A V+ CV+ AK RVKEL+ +L EA++ M+V
Sbjct: 248 VTVVLDSSYQLVSLYKPGGPVHAHTSVIQDCVALAKRRVKELQSVLNEAISDMEV 302
>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222867347|gb|EEF04478.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 439
Score = 314 bits (804), Expect = 6e-83
Identities = 158/310 (50%), Positives = 220/310 (70%), Gaps = 21/310 (6%)
Frame = +1
Query: 205 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 384
++ ++E++AFR L+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9 DLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68
Query: 385 NTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLS 564
+T MLA +K+EVMTPS ESP+EG I +DF MPPICSP VRPG+P + A +IS+QLS+ +S
Sbjct: 69 STTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIS 128
Query: 565 S--------------------SGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXX 684
SG +NL+ELS+ GKAAWMAYLDI C+DADG++FD
Sbjct: 129 RQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALL 188
Query: 685 XXXXXXXXXRIPAVSMTEEGKVIPISDNNNVEDGEQTCQSQEK-CLTLLNIPFSLTCVLY 861
+IP VS+ ++GK++ +S+ + E+ ++EK LTL +IPFSLTC+L+
Sbjct: 189 SAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLSSIPFSLTCILH 248
Query: 862 KNYLLADPNAEEERILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKE 1041
KNY+LADP AEEE I++T +TVVLDSS +LVSFYKPGG+ A V CV+ + RVKE
Sbjct: 249 KNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGSVFAYTSAVKDCVALTRQRVKE 308
Query: 1042 LKGILAEALA 1071
L+ IL EA++
Sbjct: 309 LQEILDEAIS 318
>gb|EMJ03572.1| hypothetical protein PRUPE_ppa009278mg [Prunus persica]
Length = 299
Score = 313 bits (802), Expect = 1e-82
Identities = 152/289 (52%), Positives = 212/289 (73%)
Frame = +1
Query: 217 DLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIGNTAM 396
+++++AFRRL+P +F+E +L ++ RPD R LA ARET LG VA++DGSA+ KIG+T M
Sbjct: 13 EMDVDAFRRLFPLRFFETHLVKSTRPDGRSLAEARETSSALGAVASADGSALVKIGSTRM 72
Query: 397 LAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVLSSSGF 576
LA +K+EVMTPS+ESP+EG I +DF MPPICSP VRPG+P + A ++S+QLS+ +SS G
Sbjct: 73 LAAIKMEVMTPSKESPDEGCIAIDFHMPPICSPTVRPGRPAEAAPVVSKQLSDTISSCGM 132
Query: 577 VNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEEGKVIP 756
+NL+ELS+ KAAWMAYLDI C+DADG++FD +IP VSM ++GKV+
Sbjct: 133 INLKELSLISRKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIPVVSMNDDGKVVV 192
Query: 757 ISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTFITVVLD 936
+S ++ G++ ++ LTL +IPFSLTC+L+KNY+LADP AEEE +++T +TVVLD
Sbjct: 193 LSGDHG---GKEPVNKGKRKLTLSSIPFSLTCLLHKNYILADPTAEEESVMETLVTVVLD 249
Query: 937 SSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
SSG+LVS YKPGG LA + CV+ + R +EL+ IL E + M+V
Sbjct: 250 SSGQLVSLYKPGGPVLAYTSAIQDCVALTRQRARELQTILDEVTSSMEV 298
>ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like protein [Solanum tuberosum]
gi|565400462|ref|XP_006365747.1| PREDICTED: exosome
complex component RRP43 isoform X2 [Solanum tuberosum]
gi|83283987|gb|ABC01901.1| 3'-5'-exoribonuclease/RNA
binding-like protein [Solanum tuberosum]
Length = 303
Score = 312 bits (799), Expect = 2e-82
Identities = 153/295 (51%), Positives = 220/295 (74%), Gaps = 1/295 (0%)
Frame = +1
Query: 202 SNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKI 381
S++ ++E++AFRRL+P +++E++L ++VRPDAR L AR+T L LG VA+++GSA+AKI
Sbjct: 8 SDLYSEMEVDAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTLALGAVASAEGSALAKI 67
Query: 382 GNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQLSNVL 561
G+T MLA +K+E+MTP+ E P+EG I ++F MPPICSP VRPG+P + A +IS+QLS+ +
Sbjct: 68 GSTTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEVASVISKQLSDTI 127
Query: 562 SSSGFVNLRELSISKGKAAWMAYLDITCIDADGSIFDXXXXXXXXXXXXXRIPAVSMTEE 741
SSG ++L+EL + GKAAWMAYLDI C+DADGS+FD IP VS+ E+
Sbjct: 128 LSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGSLFDAALLSTVAAFSHLNIPVVSLNED 187
Query: 742 GKVIPIS-DNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADPNAEEERILQTF 918
G+++ +S DN ++ +Q ++++ L L + PFSLTC+L+KNY+LADP AEEE I++T
Sbjct: 188 GRIVLVSEDNIQLKLEKQPVNTEKRKLKLNSPPFSLTCLLHKNYILADPTAEEESIMETA 247
Query: 919 ITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEALAQMDV 1083
+TVVLDSS +LVS YKPGG A V+ CV+ AK RVKEL+ +L EA++ M+V
Sbjct: 248 VTVVLDSSYQLVSLYKPGGPVHAHTSVIQDCVALAKRRVKELQSVLNEAISDMEV 302
>ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-like isoform X2 [Glycine
max] gi|571509870|ref|XP_006596184.1| PREDICTED: exosome
complex component RRP43-like isoform X3 [Glycine max]
Length = 307
Score = 311 bits (796), Expect = 5e-82
Identities = 154/306 (50%), Positives = 220/306 (71%), Gaps = 12/306 (3%)
Frame = +1
Query: 202 SNMEEDL----ELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 369
SN EDL E++AFRRL+P +++E++L++++RPD RPL +ARET + LG VA+++GSA
Sbjct: 4 SNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSA 63
Query: 370 MAKIGNTAMLAGVKLEVMTPSEESPEEGRIVVDFQMPPICSPYVRPGKPIDEAILISEQL 549
+ KIG+T ML +K+EVMTPS ESP+EG + +DF MPPICSP VRPG+P + + ++S+QL
Sbjct: 64 LVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQL 123
Query: 550 SNVLSSSGFVNLRELSISKGKAAWMAYL--------DITCIDADGSIFDXXXXXXXXXXX 705
S+ +SSS ++L+ELS+ GKAAWMAYL DI C+DADG++FD
Sbjct: 124 SDTISSSRMIDLKELSLVGGKAAWMAYLNAAFSIMQDIYCLDADGALFDAALISAVAALS 183
Query: 706 XXRIPAVSMTEEGKVIPISDNNNVEDGEQTCQSQEKCLTLLNIPFSLTCVLYKNYLLADP 885
+IPAV+M ++GK++ +S EDG++ +++ LTL +IPFSLTC+L+KNY+LADP
Sbjct: 184 HLQIPAVAMNDDGKIVLVSG----EDGQKPVNKEKRKLTLRSIPFSLTCILHKNYILADP 239
Query: 886 NAEEERILQTFITVVLDSSGKLVSFYKPGGNALASLDVVSVCVSYAKLRVKELKGILAEA 1065
AEEE I++T +T+VLD+SG+L+S YKPGG ALA + CV RVKELK L +
Sbjct: 240 TAEEESIMETHVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYLDKE 299
Query: 1066 LAQMDV 1083
+ M+V
Sbjct: 300 NSAMEV 305