BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020794
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26193.1| unknown [Picea sitchensis]                             160   2e-37
gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis]     131   1e-28
ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [A...   130   3e-28
ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containi...   129   7e-28
ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, part...   128   1e-27
ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]   123   4e-26
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi...   120   3e-25
ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containi...   119   6e-25
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi...   119   6e-25
gb|EMT31719.1| hypothetical protein F775_03464 [Aegilops tauschii]    118   1e-24
ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-24
gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japo...   115   8e-24
ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group] g...   115   8e-24
ref|XP_004962378.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutr...   114   1e-23
gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays] gi|41394...   114   2e-23
ref|XP_002878464.1| pentatricopeptide repeat-containing protein ...   114   2e-23
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,...   114   2e-23

>gb|ABK26193.1| unknown [Picea sitchensis]
          Length = 262

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/138 (53%), Positives = 98/138 (71%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A KL+ +M   G  P I TY+MLMKL+ R + P+M +  W+Q A+NGCCPD+ SYT+ I 
Sbjct: 119 ATKLFEKMSQCGFQPTIHTYNMLMKLYFRARNPEMGFAIWDQMARNGCCPDVNSYTVFIG 178

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI +GR EEAC +IE M+DKGMK PRFD N F + FS+ G+  IFEELA KMKH GKLD
Sbjct: 179 GLIREGRSEEACAYIESMIDKGMKAPRFDYNKFLADFSRAGRPDIFEELAAKMKHAGKLD 238

Query: 390 ISDTFLKIDARIRAKARV 443
           ISD FL+   +++ + ++
Sbjct: 239 ISDVFLRRSQKMKTRVKI 256


>gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis]
          Length = 567

 Score =  131 bits (330), Expect = 1e-28
 Identities = 62/127 (48%), Positives = 86/127 (67%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y  MI SGI P I TY+M+MK + +R+  +M    W++  + GCCPD  SYT+ I 
Sbjct: 419 AARIYKRMIQSGIKPTIHTYNMMMKSYFQRRNFEMGCVVWDEMIQKGCCPDDNSYTVFIG 478

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
           ALI  GR  EACK+IE M++KGMK P+ D N F + FS+ GK +I EELA+KMK  GK +
Sbjct: 479 ALIRQGRSGEACKYIEEMIEKGMKAPQLDYNKFAADFSRAGKPNILEELAQKMKFAGKFE 538

Query: 390 ISDTFLK 410
           +S+ F +
Sbjct: 539 VSNVFAR 545


>ref|XP_006827738.1| hypothetical protein AMTR_s00009p00261890 [Amborella trichopoda]
           gi|548832358|gb|ERM95154.1| hypothetical protein
           AMTR_s00009p00261890 [Amborella trichopoda]
          Length = 575

 Score =  130 bits (326), Expect = 3e-28
 Identities = 64/148 (43%), Positives = 95/148 (64%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI  G+ P   TY+MLMK +   K  +     W + AK G CPD  SYT+ I 
Sbjct: 426 AARVYKKMIADGLEPTFHTYNMLMKSYFLVKDYESGRAVWKEMAKKGICPDDNSYTVYIG 485

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI +G+ +EACK+IE M++KGMK+P+FD N F + FS+ GK +I EELA+KMK  GK D
Sbjct: 486 GLIREGKSDEACKYIEDMINKGMKLPQFDYNKFAADFSRAGKPNILEELAQKMKFSGKFD 545

Query: 390 ISDTFLKIDARIRAKARVEGNYETYKIR 473
           +S+ FL+   R++ + +   + +T + R
Sbjct: 546 VSNIFLRFADRMKRRVKRRDSDQTRQHR 573


>ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Solanum lycopersicum]
          Length = 691

 Score =  129 bits (323), Expect = 7e-28
 Identities = 63/137 (45%), Positives = 86/137 (62%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A  LY +MI +GI P I TY+MLMK F   K   M + TW + +  GCCPD  SYT+ I 
Sbjct: 550 AVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIG 609

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR  EACK++E M+DKGMK P+ D N F + FS+ GK  I EELA++MK  GK +
Sbjct: 610 GLIGQGRSMEACKYLEEMIDKGMKAPQLDYNKFAADFSRGGKPDILEELAKRMKFSGKFE 669

Query: 390 ISDTFLKIDARIRAKAR 440
           +S  F +    ++++ +
Sbjct: 670 VSSLFARWAEMMKSRVK 686


>ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, partial [Populus
           trichocarpa] gi|550324008|gb|EEE98620.2| hypothetical
           protein POPTR_0014s11650g, partial [Populus trichocarpa]
          Length = 614

 Score =  128 bits (321), Expect = 1e-27
 Identities = 59/127 (46%), Positives = 87/127 (68%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI +GI P+I +Y+M+MK + R +  +M +  W++ +K G CPD  SYT+ I 
Sbjct: 474 AVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIG 533

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR EEACK++E M++KGMK P+ D N F + FS+ GK  I EELA+KMK  GK +
Sbjct: 534 GLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMKFSGKFE 593

Query: 390 ISDTFLK 410
           +S+ F +
Sbjct: 594 VSNVFAR 600



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 33/122 (27%), Positives = 60/122 (49%)
 Frame = +3

Query: 15  KKFTVACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSY 194
           K    A +++ EM+D G  P+IVT++++++  +R K+     + +      G  PD+ SY
Sbjct: 329 KNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSY 388

Query: 195 TLLIRALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKH 374
           T+LIR L    + +EA  +   M+D G            + +    +  +  EL ++MK 
Sbjct: 389 TILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKE 448

Query: 375 KG 380
           KG
Sbjct: 449 KG 450


>ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Solanum tuberosum]
          Length = 687

 Score =  127 bits (320), Expect = 2e-27
 Identities = 62/137 (45%), Positives = 86/137 (62%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A  LY +MI +GI P I TY+MLMK F   K   M + TW + +  GCCPD  SYT+ I 
Sbjct: 546 AVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIG 605

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR  EACK++E M+DKGMK P+ D N F + FS+ G+  I EELA++MK  GK +
Sbjct: 606 GLIGQGRSMEACKYLEEMIDKGMKAPQLDYNKFAADFSRGGRPDILEELAKRMKFSGKFE 665

Query: 390 ISDTFLKIDARIRAKAR 440
           +S  F +    ++++ +
Sbjct: 666 VSSLFARWAEMMKSRVK 682



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 56/122 (45%)
 Frame = +3

Query: 15  KKFTVACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSY 194
           K    A K++ EMID G  P+IV ++ +++  ++ K+     + +      G  P+  SY
Sbjct: 401 KNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSY 460

Query: 195 TLLIRALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKH 374
           T+LIR L   G+ +EA    E M+  G +          + F  + K      L  +MK 
Sbjct: 461 TILIRDLCKQGKMDEAVAGFEEMLSSGCEADAATFTCLVTGFGNKKKMDKVFALLREMKE 520

Query: 375 KG 380
           KG
Sbjct: 521 KG 522


>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score =  123 bits (308), Expect = 4e-26
 Identities = 56/127 (44%), Positives = 82/127 (64%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI +GI P + TY+M+MK +   +  +M    W +  + GCCPD  SY + I 
Sbjct: 531 AVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIG 590

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR EEAC+++E M++KGMK P+ D N F + FS+ GK  I EELA KMK +GK +
Sbjct: 591 GLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEGKFE 650

Query: 390 ISDTFLK 410
           +S+ F +
Sbjct: 651 VSNVFAR 657


>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Vitis vinifera]
          Length = 679

 Score =  120 bits (300), Expect = 3e-25
 Identities = 55/127 (43%), Positives = 81/127 (63%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI +GI   + TY+M+MK +   +  +M    W +  + GCCPD  SY + I 
Sbjct: 531 AVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIG 590

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR EEAC+++E M++KGMK P+ D N F + FS+ GK  I EELA KMK +GK +
Sbjct: 591 GLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMKFEGKFE 650

Query: 390 ISDTFLK 410
           +S+ F +
Sbjct: 651 VSNVFAR 657


>ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 646

 Score =  119 bits (298), Expect = 6e-25
 Identities = 56/127 (44%), Positives = 81/127 (63%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI +G+ P+I TY M+MK + + +   M    W +  + GCCPD  +YT+LI 
Sbjct: 485 AVRIYKKMIQNGVEPSIHTYVMIMKSYFQTRNYDMGRAVWEEMIEKGCCPDDNAYTVLIG 544

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR  EACK +E M++KGMKIP+ D N F + FS+ GK  I  E+A KMK  GK +
Sbjct: 545 GLICQGRTGEACKFLEEMIEKGMKIPQLDFNKFAADFSRAGKPDILVEMARKMKLAGKFE 604

Query: 390 ISDTFLK 410
           +S+ F +
Sbjct: 605 LSNVFAR 611


>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
           gi|449490811|ref|XP_004158714.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
          Length = 621

 Score =  119 bits (298), Expect = 6e-25
 Identities = 57/137 (41%), Positives = 85/137 (62%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI++GI P   TYSM+MK + + +  +M    W++    GCCPD  SYT+ I 
Sbjct: 471 AVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIG 530

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GRC EA K++E M++KGMK P+ D N F + FS+ G+  I EELA+KMK  GK +
Sbjct: 531 GLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFE 590

Query: 390 ISDTFLKIDARIRAKAR 440
            S+   +    +R + +
Sbjct: 591 ASNVIARWAEMMRKRVK 607


>gb|EMT31719.1| hypothetical protein F775_03464 [Aegilops tauschii]
          Length = 406

 Score =  118 bits (295), Expect = 1e-24
 Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKL-FIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLI 206
           A ++Y +MI+ G+ P I TY+M+MKL F+R     M    W++  + G CPD+ +YT+ I
Sbjct: 257 AVRIYKKMINKGLEPTIHTYNMMMKLYFLRGTNYAMGCAVWDEMHRKGICPDVNAYTVFI 316

Query: 207 RALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKL 386
              I  GR EEACK IE M+ KGMK P+ D N F + FSK GK  I  ELA+K+K  GK 
Sbjct: 317 NGHIRHGRPEEACKFIEEMIQKGMKAPQIDYNKFAADFSKAGKPDILFELAQKVKFTGKF 376

Query: 387 DISDTFLKIDARIRAKAR 440
           D S+ F +   R+R++ +
Sbjct: 377 DESNVFHQWGERMRSRVK 394


>ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cicer arietinum]
          Length = 685

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/123 (47%), Positives = 76/123 (61%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI SGI P I TY+M+MK +   K  +M    W++    GCCPD  SY + I 
Sbjct: 537 AVRVYRKMIQSGIEPTIHTYNMIMKSYFVTKNYEMGRAVWDEMRHKGCCPDDNSYIVFIG 596

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR +EACK++E MM KGMK P+ D N F + FSK G   I EELA KM   GK +
Sbjct: 597 GLIRQGRPDEACKYLEEMMQKGMKAPQLDYNKFAADFSKYGNPVILEELARKMNFAGKFE 656

Query: 390 ISD 398
           +S+
Sbjct: 657 VSN 659


>ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14820,
           mitochondrial-like [Glycine max]
          Length = 593

 Score =  117 bits (292), Expect = 3e-24
 Identities = 57/123 (46%), Positives = 77/123 (62%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI SGI P I TY+M+MK +   K  +M +E W++  + GCCPD  SY + I 
Sbjct: 445 AVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIG 504

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI   R  EACK++E M++KGMK P+ D N F S  SK G   I EELA KM   GK +
Sbjct: 505 GLIRQDRSGEACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMNFVGKFE 564

Query: 390 ISD 398
           +S+
Sbjct: 565 VSN 567


>gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
          Length = 378

 Score =  115 bits (288), Expect = 8e-24
 Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMK-LFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLI 206
           A ++Y +MI  G+ P I TY+M+MK  F+  +   M    W +  + G CPD+ SYT+ I
Sbjct: 229 AARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFI 288

Query: 207 RALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKL 386
              I  GR EEACK+IE M+ KGMK P+ D N F + FSK GK  I  ELA+K+K  GK 
Sbjct: 289 NGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKF 348

Query: 387 DISDTFLKIDARIRAKAR 440
           D S+ F +   R++ + +
Sbjct: 349 DASNVFHQWAERMKKRVK 366


>ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
           gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa
           Japonica Group] gi|55168069|gb|AAV43937.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa
           Japonica Group]
          Length = 632

 Score =  115 bits (288), Expect = 8e-24
 Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMK-LFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLI 206
           A ++Y +MI  G+ P I TY+M+MK  F+  +   M    W +  + G CPD+ SYT+ I
Sbjct: 483 AARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFI 542

Query: 207 RALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKL 386
              I  GR EEACK+IE M+ KGMK P+ D N F + FSK GK  I  ELA+K+K  GK 
Sbjct: 543 NGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKF 602

Query: 387 DISDTFLKIDARIRAKAR 440
           D S+ F +   R++ + +
Sbjct: 603 DASNVFHQWAERMKKRVK 620


>ref|XP_004962378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Setaria italica]
          Length = 623

 Score =  115 bits (287), Expect = 1e-23
 Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMK-LFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLI 206
           A ++Y +MI  G+ P I TY+M+MK  F+  +   M    W +  + G CPD+ SYT+ I
Sbjct: 474 AARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNFAMGCAVWEEMHRKGICPDVNSYTVFI 533

Query: 207 RALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKL 386
              I  GR EEACK+IE M++KGMK P+ D N F + F+K GK  I  ELA+K++  GK+
Sbjct: 534 NGHIRHGRPEEACKYIEEMINKGMKAPQIDYNKFAADFAKAGKPDILYELAQKVEFAGKV 593

Query: 387 DISDTFLKIDARIRAKAR 440
           D+S+ F +   R++++ +
Sbjct: 594 DVSNVFHQWAERMKSRVK 611


>ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutrema salsugineum]
           gi|557103471|gb|ESQ43825.1| hypothetical protein
           EUTSA_v10005842mg [Eutrema salsugineum]
          Length = 611

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/135 (40%), Positives = 84/135 (62%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI +GI P+I T++M+MK +   +  +M    W++  K G CPD  SYT+LIR
Sbjct: 469 ATRIYNKMIQNGIEPSIHTFNMIMKSYFMARNYEMGRAAWDEMVKKGICPDDNSYTVLIR 528

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI +G+  EAC+++E M+D+GMK P  D N F + F + G+  IFEEL+++ K  GK  
Sbjct: 529 GLIGEGKSREACRYLEEMLDRGMKTPLIDYNKFAADFHRAGQPEIFEELSQRAKFSGKFV 588

Query: 390 ISDTFLKIDARIRAK 434
            ++ F +     R K
Sbjct: 589 AAEIFARWAQMTRRK 603



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/122 (24%), Positives = 62/122 (50%)
 Frame = +3

Query: 15  KKFTVACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSY 194
           K    A +++  MID G+ P+IV ++++++  +R ++     + ++     G CP++ SY
Sbjct: 324 KNLMEAARIWNHMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 383

Query: 195 TLLIRALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKH 374
           T++IR        E A ++ + M+D G++          + F  + K     EL ++M+ 
Sbjct: 384 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 443

Query: 375 KG 380
           KG
Sbjct: 444 KG 445


>gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
           gi|413945077|gb|AFW77726.1| ATP binding protein isoform
           2 [Zea mays] gi|413945078|gb|AFW77727.1| ATP binding
           protein isoform 3 [Zea mays]
          Length = 634

 Score =  114 bits (285), Expect = 2e-23
 Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMK-LFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLI 206
           A ++Y +MI  G+ P I TY+M+MK  F+      M    W +  + G CPD+ SYT+ I
Sbjct: 490 AARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFI 549

Query: 207 RALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKL 386
              I  GR EEA K+IE M++KGMK P+ D N F + FSK GK  I  ELA+K+K  GKL
Sbjct: 550 NGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKVKFAGKL 609

Query: 387 DISDTFLKIDARIRAKAR 440
           D+S+ F +   R++++ +
Sbjct: 610 DVSNVFYQWADRMKSRVK 627


>ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324302|gb|EFH54723.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 628

 Score =  114 bits (285), Expect = 2e-23
 Identities = 54/127 (42%), Positives = 81/127 (63%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +MI + I P+I T++M+MK +   +  +M    W++  K G CPD  SYT+LIR
Sbjct: 466 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIR 525

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI +G+  EAC+++E M+DKGMK P  D N F + F K G+  IFEELA++ K  GK  
Sbjct: 526 GLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPEIFEELAQRAKFSGKFA 585

Query: 390 ISDTFLK 410
            ++ F +
Sbjct: 586 AAEIFAR 592



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/117 (24%), Positives = 62/117 (52%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A +++ +MID G+ P+IV ++++++  +R ++     + ++     G CP++ SYT++IR
Sbjct: 326 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 385

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKG 380
                   E A ++ + M+D G++          + F  + K     EL ++M+ KG
Sbjct: 386 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 442


>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/137 (39%), Positives = 83/137 (60%)
 Frame = +3

Query: 30  ACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYTLLIR 209
           A ++Y +M  SGI P I TY+M+MK + + +  +M    W++ ++ G CPD  SYT+LI 
Sbjct: 391 AARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIG 450

Query: 210 ALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHKGKLD 389
            LI  GR  EACK++E M++KGMK P+ D N F +  S+ G   I EELA+++K  GK  
Sbjct: 451 GLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILEELAQRLKFSGKFG 510

Query: 390 ISDTFLKIDARIRAKAR 440
           +S+        I+ + +
Sbjct: 511 VSNVLASWAGMIQKRVK 527



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 35/122 (28%), Positives = 62/122 (50%)
 Frame = +3

Query: 15  KKFTVACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSY 194
           K    A  ++ EMID G  P+IV ++++++  +R K+     + +      G  PD+ SY
Sbjct: 246 KNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSY 305

Query: 195 TLLIRALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKH 374
           T+LIR L    + EEA ++ + M+D G K          + F  R +  +  +L ++MK 
Sbjct: 306 TILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKE 365

Query: 375 KG 380
           +G
Sbjct: 366 EG 367



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/121 (26%), Positives = 58/121 (47%)
 Frame = +3

Query: 18  KFTVACKLYMEMIDSGITPNIVTYSMLMKLFIRRKRPQMVYETWNQRAKNGCCPDIVSYT 197
           K   A + + EMIDSG  P+   Y+ L+  F  RKR  MVY+   +  + GC PD ++Y 
Sbjct: 317 KMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYN 376

Query: 198 LLIRALIMDGRCEEACKHIERMMDKGMKIPRFDTNVFYSQFSKRGKRHIFEELAEKMKHK 377
            LI+ +      ++A +  ++M   G++      N+    + +     +   + ++M  K
Sbjct: 377 ALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRK 436

Query: 378 G 380
           G
Sbjct: 437 G 437