BLASTX nr result

ID: Ephedra27_contig00020553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020553
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006401285.1| hypothetical protein EUTSA_v10013318mg [Eutr...    56   5e-06

>ref|XP_006401285.1| hypothetical protein EUTSA_v10013318mg [Eutrema salsugineum]
           gi|557102375|gb|ESQ42738.1| hypothetical protein
           EUTSA_v10013318mg [Eutrema salsugineum]
          Length = 502

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 7/183 (3%)
 Frame = -3

Query: 553 DDMLLKILSYTTFNYYKEVVKCSALSRRWRSLYTISSALRLIECEMVGKSYHNLSENDRR 374
           DD+L+KILS       K V+  S LS+RWRSL+T+   L   E +   + +   +  D+ 
Sbjct: 9   DDLLIKILSLVPT---KNVIAMSILSKRWRSLWTLLPRLIFGEDDEDEEEHAEYNWADQI 65

Query: 373 NLMEKIVSFALSRQKANVQDFVLEVNDM---SQWNWCLKFVSNYAITDLSLVSYQHSVLE 203
           NL + + +  L  +   ++ F L +  +   S+    ++   +  + DL +       L 
Sbjct: 66  NLSQVVYTTLLLHKAQVLECFHLNITTICSASEIELWVRVAVDRFVRDLKIRFCNGYGLI 125

Query: 202 DFPFS---CENLVDLNMSHVEFGLQACHLGFPKLKHCRLFFPGHS-HFCYTEFLRNCPVL 35
             P S    E L  L +  V+F        FP LK  RL F  ++    +   + NCPVL
Sbjct: 126 TLPISLYRSETLETLELRSVKFLEVPSQFSFPSLKRLRLLFVKYADEESFVRLISNCPVL 185

Query: 34  EFL 26
           E L
Sbjct: 186 EDL 188


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