BLASTX nr result

ID: Ephedra27_contig00020345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020345
         (520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16820.1| unknown [Picea sitchensis]                             111   1e-22

>gb|ABR16820.1| unknown [Picea sitchensis]
          Length = 815

 Score =  111 bits (277), Expect = 1e-22
 Identities = 70/181 (38%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
 Frame = -3

Query: 518 MSITPPIEAPXXXXXXXXXXXXXXXXXXL--QRGNKSEKKTKYFDHADQEIFVVKERNT- 348
           +S+TPP  AP                     +R  ++E   ++ DH D+E+F+VK R T 
Sbjct: 450 VSVTPPTIAPYLLWSVRSHCFERKFQFLECIRRIKRAEMVMRFVDHDDKEVFIVKTRTTA 509

Query: 347 ----NHVMRSHKKENKKNSSIKPKTVTIYPGRSVSKILQGGGKLLVTAEE-VSNGKKVEW 183
               +  +RS ++ + +    K + VT+Y     SK L   G+ +  AEE ++ G   +W
Sbjct: 510 KPYTSSFLRS-EEVSLRGLPDKRQIVTVYQRNPNSKKLISSGETVANAEELITIGGTAKW 568

Query: 182 VFINGSCKLAISNLDNFEKL-PEFELSGNFGHPLRLISGRKLQYEVKCHNPEIERQFATL 6
             +N SC L + NL+N  K  P FEL GN G PLRL+SGRKLQYEVKC  PEIE +F TL
Sbjct: 569 TLMNNSCSLLLRNLNNISKEEPIFELRGNLGKPLRLLSGRKLQYEVKCAKPEIEHEFVTL 628

Query: 5   V 3
           V
Sbjct: 629 V 629


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