BLASTX nr result

ID: Ephedra27_contig00020247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020247
         (543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE773...    67   3e-09
ref|XP_006572837.1| PREDICTED: uncharacterized protein LOC100527...    62   7e-08
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...    60   4e-07
ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote...    60   4e-07
ref|XP_006425348.1| hypothetical protein CICLE_v10026375mg [Citr...    58   2e-06
ref|XP_006828824.1| hypothetical protein AMTR_s00001p00140760 [A...    58   2e-06
ref|XP_006467033.1| PREDICTED: transformer-2 protein homolog bet...    57   2e-06
ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago trun...    56   5e-06
gb|AFK46395.1| unknown [Lotus japonicus]                               55   8e-06

>gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE77346.1| unknown
           [Picea sitchensis]
          Length = 220

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
 Frame = -2

Query: 509 GNYLGVKSARDAGP-YHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYS 342
           GNYLGVKS R+ G  YH                  ++ R GYS RR+P   PYR+GR YS
Sbjct: 129 GNYLGVKSTREFGSSYHGHDRRRG-----------YNDRYGYSSRRSPRPSPYREGRMYS 177

Query: 341 PRHSPSYRDGRGYSKRERTRSPAYSPP---PYDNRG 243
           PR SP YR G   S+R+R+R+P YSPP   P  +RG
Sbjct: 178 PRRSP-YRGGG--SRRDRSRTPPYSPPYESPVRSRG 210


>ref|XP_006572837.1| PREDICTED: uncharacterized protein LOC100527350 isoform X1 [Glycine
           max] gi|255636876|gb|ACU18771.1| unknown [Glycine max]
          Length = 246

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 37/82 (45%), Positives = 44/82 (53%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTPPYRDGRGYSPRHS 330
           G+YLG+KS RD G  H                  +   RG S R +PPYR GR YSPRHS
Sbjct: 156 GHYLGLKSTRDYG--HRGDHGRYRGGGSGHDDYGYRGDRGRSPRHSPPYRGGRDYSPRHS 213

Query: 329 PSYRDGRGYSKRERTRSPAYSP 264
           P    GR  S+R+R+RS  YSP
Sbjct: 214 PPPYGGR--SRRDRSRSLPYSP 233


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYSP 339
           G+YLG+KS RD+G                      S R  Y +RR+P   PYR  R YSP
Sbjct: 152 GHYLGLKSTRDSG------YRGGDRGSSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSP 205

Query: 338 RHSPSYRDGRGYSKRERTRSPAYSPPPY 255
           RHSP Y  G G S+R+ +RSP    PPY
Sbjct: 206 RHSPPY--GGGRSRRDHSRSPPPYSPPY 231


>ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
           partial [Cucumis sativus]
          Length = 238

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYSP 339
           G+YLG+KS RD+G                      S R  Y +RR+P   PYR  R YSP
Sbjct: 146 GHYLGLKSTRDSG------YRGGDRGSSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSP 199

Query: 338 RHSPSYRDGRGYSKRERTRSPAYSPPPY 255
           RHSP Y  G G S+R+ +RSP    PPY
Sbjct: 200 RHSPPY--GGGRSRRDHSRSPPPYSPPY 225


>ref|XP_006425348.1| hypothetical protein CICLE_v10026375mg [Citrus clementina]
           gi|557527338|gb|ESR38588.1| hypothetical protein
           CICLE_v10026375mg [Citrus clementina]
          Length = 238

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYSP 339
           G+YLG+KS+RD G                      S R  Y +RR+P   PYR GR YSP
Sbjct: 158 GHYLGLKSSRDIG--------------RGDRGRYRSSRDDYGYRRSPRRSPYRGGRDYSP 203

Query: 338 RHSPSYRDGRGYSKRERTRSPAYSP 264
           RHSP Y    G S+RER+RS   SP
Sbjct: 204 RHSPPY---GGRSRRERSRSVPRSP 225


>ref|XP_006828824.1| hypothetical protein AMTR_s00001p00140760 [Amborella trichopoda]
           gi|548833803|gb|ERM96240.1| hypothetical protein
           AMTR_s00001p00140760 [Amborella trichopoda]
          Length = 228

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/87 (47%), Positives = 45/87 (51%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTPPYRDGRGYSPRHS 330
           GNYLGVKS RD+G                    R SPRR        PYR GR YSPR S
Sbjct: 141 GNYLGVKSNRDSG--RERGRYRGGYGREDYGGYRRSPRRS-------PYRGGRDYSPRRS 191

Query: 329 PSYRDGRGYSKRERTRSPAYSPPPYDN 249
           P    G G S+RER+RS  YS PPYD+
Sbjct: 192 PY---GGGRSRRERSRSLPYS-PPYDS 214


>ref|XP_006467033.1| PREDICTED: transformer-2 protein homolog beta-like [Citrus
           sinensis]
          Length = 238

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYSP 339
           G+YLG+KS+RD G                      S R  Y +RR+P   PYR GR YSP
Sbjct: 158 GHYLGLKSSRDIG--------------RGDRGRYRSGRDDYGYRRSPRRSPYRGGRDYSP 203

Query: 338 RHSPSYRDGRGYSKRERTRSPAYSP 264
           RHSP Y    G S+RER+RS   SP
Sbjct: 204 RHSPPY---GGRSRRERSRSVPRSP 225


>ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago truncatula]
           gi|355513595|gb|AES95218.1| Scaffold attachment factor
           B1 [Medicago truncatula]
          Length = 303

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/82 (40%), Positives = 40/82 (48%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTPPYRDGRGYSPRHS 330
           G+YLG+K+ RD GP                     SPRR        PYR  R YSPRHS
Sbjct: 218 GHYLGLKNTRDYGPRGGDRGRHQGGFGRDDYPYHRSPRRS-------PYRGSRDYSPRHS 270

Query: 329 PSYRDGRGYSKRERTRSPAYSP 264
           P    G G  +R+R+RSP Y+P
Sbjct: 271 P--YGGSGRYRRDRSRSPPYAP 290


>gb|AFK46395.1| unknown [Lotus japonicus]
          Length = 268

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/85 (43%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = -2

Query: 509 GNYLGVKSARDAGPYHXXXXXXXXXXXXXXXXXRHSPRRGYSHRRTP---PYRDGRGYSP 339
           G+YLG+KS RD    H                   S R  Y HRR+P   PYR GR YSP
Sbjct: 178 GHYLGLKSTRDRDYGHRGGDRGRYRGGGGGG----SGRDDYQHRRSPRRSPYRGGRDYSP 233

Query: 338 RHSPSYRDGRGYSKRERTRSPAYSP 264
           R S  Y    G S+RER+RS  YSP
Sbjct: 234 RRSSPY---AGSSRRERSRSLPYSP 255


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