BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020246
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39879.1| unknown [Picea sitchensis]                             145   4e-33
gb|AFB32904.1| hypothetical protein 0_6683_01, partial [Pinus mugo]    83   3e-14
gb|AFB32903.1| hypothetical protein 0_6683_01, partial [Pinus ce...    83   4e-14
gb|AEW07605.1| hypothetical protein 0_6683_01, partial [Pinus ra...    82   6e-14
gb|AFB32902.1| hypothetical protein 0_6683_01, partial [Larix de...    82   7e-14
gb|AEW07606.1| hypothetical protein 0_6683_01, partial [Pinus la...    80   4e-13
gb|ABK25330.1| unknown [Picea sitchensis]                              67   2e-09
ref|NP_001267839.1| zinc finger CCCH domain-containing protein 3...    56   6e-06

>gb|ACN39879.1| unknown [Picea sitchensis]
          Length = 768

 Score =  145 bits (367), Expect = 4e-33
 Identities = 81/123 (65%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +1

Query: 1   HAFTQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMS 180
           HA+ QI NQMLPPINTQAFSQGI           SPGH++ QSPF SSSYG+  SP RMS
Sbjct: 573 HAYIQIQNQMLPPINTQAFSQGIKQ--------MSPGHSLMQSPFQSSSYGL-GSPGRMS 623

Query: 181 PRCVDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPP-TMSDWGSP 357
           PRCVDVER N  G+ LSPA A +LNSR A A +QR+KRS SSR+LGA+V P + SDWGSP
Sbjct: 624 PRCVDVERHNTCGSPLSPAMAATLNSRIA-AFVQRDKRSHSSRDLGANVTPNSWSDWGSP 682

Query: 358 TGK 366
           TGK
Sbjct: 683 TGK 685


>gb|AFB32904.1| hypothetical protein 0_6683_01, partial [Pinus mugo]
          Length = 152

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 51/119 (42%), Positives = 69/119 (57%)
 Frame = +1

Query: 10  TQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPRC 189
           + + NQ    INTQ   Q  +   Q   +P+SPGH+  QS   S SY + S  R MS   
Sbjct: 5   SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62

Query: 190 VDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPPTMSDWGSPTGK 366
            D +   +S + LSP  + ++NSR   A   +++RS SSR+LGAH+ PT SDWGSPTGK
Sbjct: 63  GDFQCHKSSESMLSPVMSPTINSRVT-AFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120


>gb|AFB32903.1| hypothetical protein 0_6683_01, partial [Pinus cembra]
          Length = 152

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 51/119 (42%), Positives = 69/119 (57%)
 Frame = +1

Query: 10  TQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPRC 189
           + + NQ    INTQ   Q  +   Q   +P+SPGH+  QS   S SY + S  R MS   
Sbjct: 5   SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62

Query: 190 VDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPPTMSDWGSPTGK 366
            D +   +S + LSP  + ++NSR   A   +++RS SSR+LGAH+ PT SDWGSPTGK
Sbjct: 63  GDFQCHKSSESLLSPVMSPTINSRVT-AFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120


>gb|AEW07605.1| hypothetical protein 0_6683_01, partial [Pinus radiata]
           gi|383145595|gb|AFG54386.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145597|gb|AFG54387.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145599|gb|AFG54388.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145601|gb|AFG54389.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145603|gb|AFG54390.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145605|gb|AFG54391.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145607|gb|AFG54392.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145609|gb|AFG54393.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145611|gb|AFG54394.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145613|gb|AFG54395.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145615|gb|AFG54396.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145617|gb|AFG54397.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145619|gb|AFG54398.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145621|gb|AFG54399.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145623|gb|AFG54400.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145625|gb|AFG54401.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145627|gb|AFG54402.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
           gi|383145629|gb|AFG54403.1| hypothetical protein
           0_6683_01, partial [Pinus taeda]
          Length = 152

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 51/119 (42%), Positives = 69/119 (57%)
 Frame = +1

Query: 10  TQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPRC 189
           + + NQ    INTQ   Q  +   Q   +P+SPGH+  QS   S SY + S  R MS   
Sbjct: 5   SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSYLQSSVLSPSYSLASLGR-MSSFS 62

Query: 190 VDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPPTMSDWGSPTGK 366
            D +   +S + LSP  + ++NSR   A   +++RS SSR+LGAH+ PT SDWGSPTGK
Sbjct: 63  GDFQCHKSSESLLSPVMSPTINSRVT-AFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120


>gb|AFB32902.1| hypothetical protein 0_6683_01, partial [Larix decidua]
          Length = 152

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 51/119 (42%), Positives = 70/119 (58%)
 Frame = +1

Query: 10  TQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPRC 189
           + + NQ    I+TQ   Q  +   Q   +P+SPGH+  QS   S SY + S  R MS   
Sbjct: 5   SHLQNQKQLSISTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62

Query: 190 VDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPPTMSDWGSPTGK 366
            D +   ++ + LSP  + +LNSR + A   +++RS SSR+LGAHV PT SDWGSPTGK
Sbjct: 63  GDFQCHKSNESLLSPVMSPTLNSRVS-AFSHQDRRSYSSRDLGAHVLPTSSDWGSPTGK 120


>gb|AEW07606.1| hypothetical protein 0_6683_01, partial [Pinus lambertiana]
          Length = 152

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/119 (42%), Positives = 68/119 (57%)
 Frame = +1

Query: 10  TQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPRC 189
           + + NQ    INTQ   Q  +   Q   +P+SPG +  QS   S SY + S  R MS   
Sbjct: 5   SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGRSFLQSSVLSPSYSLASLGR-MSSFS 62

Query: 190 VDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVPPTMSDWGSPTGK 366
            D +   +S + LSP  + ++NSR   A   +++RS SSR+LGAH+ PT SDWGSPTGK
Sbjct: 63  GDFQCHKSSESLLSPVMSPTINSRVT-AFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120


>gb|ABK25330.1| unknown [Picea sitchensis]
          Length = 360

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
 Frame = +1

Query: 7   FTQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRR---- 174
           F+QI +Q    I +   +QG       +    S  H M Q        G   SP +    
Sbjct: 156 FSQISSQ----IQSHKAAQGQPQVQTPISSQISQIHQMQQGAIGGQGSGHLHSPVQPSHC 211

Query: 175 MSPRCVDVERLNASGASLSPARALSLNSRAAVAVIQREKRSLSSRELGAHVP-PTMSDWG 351
           MS   +D+ER N++G+SLSPA   ++ SR+A +  QR+ R  SSR+LGAH   P+++DWG
Sbjct: 212 MSSLGLDLERQNSNGSSLSPALMAAMKSRSA-SFAQRDIRCYSSRDLGAHGSLPSLADWG 270

Query: 352 SPTGK 366
           SPTGK
Sbjct: 271 SPTGK 275


>ref|NP_001267839.1| zinc finger CCCH domain-containing protein 30-like [Vitis vinifera]
           gi|294440421|gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 50/133 (37%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
 Frame = +1

Query: 7   FTQIPNQMLPPINTQAFSQGISHGHQTLLEPESPGHTMTQSPFHSSSYGICSSPRRMSPR 186
           F Q    ML PINT  FS            P++  H + Q+     S+GI SSP RMSPR
Sbjct: 542 FQQQQQSMLSPINTNVFS------------PKNVEHPLLQA-----SFGI-SSPGRMSPR 583

Query: 187 CVDVERLNASGASLSPARALSLNSRAAVAVIQREK-----RSLSSRELGAHVPPTM---- 339
              +E ++  G  LS             A+ QREK     RSLSSR+LG++ P ++    
Sbjct: 584 --SMEPISPMGPRLS-------------AIAQREKQHQQLRSLSSRDLGSNNPASVVGSP 628

Query: 340 ----SDWGSPTGK 366
               S WGSPTGK
Sbjct: 629 VNSWSKWGSPTGK 641