BLASTX nr result
ID: Ephedra27_contig00020245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00020245
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN39879.1| unknown [Picea sitchensis] 114 2e-23
gb|AFB32904.1| hypothetical protein 0_6683_01, partial [Pinus mugo] 56 4e-06
gb|AFB32903.1| hypothetical protein 0_6683_01, partial [Pinus ce... 56 4e-06
gb|AEW07605.1| hypothetical protein 0_6683_01, partial [Pinus ra... 56 6e-06
gb|AFB32902.1| hypothetical protein 0_6683_01, partial [Larix de... 55 7e-06
>gb|ACN39879.1| unknown [Picea sitchensis]
Length = 768
Score = 114 bits (284), Expect = 2e-23
Identities = 67/123 (54%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 HAFTQIPSQMLPPINTQAFSQGISHGHQQLLEAESPGHTLTQSPFHSSSYGICSSPRRMS 180
HA+ QI +QMLPPINTQAFSQGI + SPGH+L QSPF SSSYG+ SP RMS
Sbjct: 573 HAYIQIQNQMLPPINTQAFSQGI--------KQMSPGHSLMQSPFQSSSYGL-GSPGRMS 623
Query: 181 PRCVDVERLXXXXXXXXXXXXXXXXXXXXXTVIQREKRSLSSREVGAHVPP-TMSDWGSP 357
PRCVDVER +QR+KRS SSR++GA+V P + SDWGSP
Sbjct: 624 PRCVDVER-HNTCGSPLSPAMAATLNSRIAAFVQRDKRSHSSRDLGANVTPNSWSDWGSP 682
Query: 358 TGK 366
TGK
Sbjct: 683 TGK 685
>gb|AFB32904.1| hypothetical protein 0_6683_01, partial [Pinus mugo]
Length = 152
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/119 (33%), Positives = 55/119 (46%)
Frame = +1
Query: 10 TQIPSQMLPPINTQAFSQGISHGHQQLLEAESPGHTLTQSPFHSSSYGICSSPRRMSPRC 189
+ + +Q INTQ Q + Q + +SPGH+ QS S SY + S R MS
Sbjct: 5 SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62
Query: 190 VDVERLXXXXXXXXXXXXXXXXXXXXXTVIQREKRSLSSREVGAHVPPTMSDWGSPTGK 366
D + +++RS SSR++GAH+ PT SDWGSPTGK
Sbjct: 63 GDFQ-CHKSSESMLSPVMSPTINSRVTAFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120
>gb|AFB32903.1| hypothetical protein 0_6683_01, partial [Pinus cembra]
Length = 152
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/119 (33%), Positives = 55/119 (46%)
Frame = +1
Query: 10 TQIPSQMLPPINTQAFSQGISHGHQQLLEAESPGHTLTQSPFHSSSYGICSSPRRMSPRC 189
+ + +Q INTQ Q + Q + +SPGH+ QS S SY + S R MS
Sbjct: 5 SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62
Query: 190 VDVERLXXXXXXXXXXXXXXXXXXXXXTVIQREKRSLSSREVGAHVPPTMSDWGSPTGK 366
D + +++RS SSR++GAH+ PT SDWGSPTGK
Sbjct: 63 GDFQ-CHKSSESLLSPVMSPTINSRVTAFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120
>gb|AEW07605.1| hypothetical protein 0_6683_01, partial [Pinus radiata]
gi|383145595|gb|AFG54386.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145597|gb|AFG54387.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145599|gb|AFG54388.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145601|gb|AFG54389.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145603|gb|AFG54390.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145605|gb|AFG54391.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145607|gb|AFG54392.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145609|gb|AFG54393.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145611|gb|AFG54394.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145613|gb|AFG54395.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145615|gb|AFG54396.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145617|gb|AFG54397.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145619|gb|AFG54398.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145621|gb|AFG54399.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145623|gb|AFG54400.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145625|gb|AFG54401.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145627|gb|AFG54402.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
gi|383145629|gb|AFG54403.1| hypothetical protein
0_6683_01, partial [Pinus taeda]
Length = 152
Score = 55.8 bits (133), Expect = 6e-06
Identities = 40/119 (33%), Positives = 55/119 (46%)
Frame = +1
Query: 10 TQIPSQMLPPINTQAFSQGISHGHQQLLEAESPGHTLTQSPFHSSSYGICSSPRRMSPRC 189
+ + +Q INTQ Q + Q + +SPGH+ QS S SY + S R MS
Sbjct: 5 SHLQNQKQLSINTQLL-QATTQMQQAATDPQSPGHSYLQSSVLSPSYSLASLGR-MSSFS 62
Query: 190 VDVERLXXXXXXXXXXXXXXXXXXXXXTVIQREKRSLSSREVGAHVPPTMSDWGSPTGK 366
D + +++RS SSR++GAH+ PT SDWGSPTGK
Sbjct: 63 GDFQ-CHKSSESLLSPVMSPTINSRVTAFSHQDRRSYSSRDLGAHLLPTSSDWGSPTGK 120
>gb|AFB32902.1| hypothetical protein 0_6683_01, partial [Larix decidua]
Length = 152
Score = 55.5 bits (132), Expect = 7e-06
Identities = 40/119 (33%), Positives = 55/119 (46%)
Frame = +1
Query: 10 TQIPSQMLPPINTQAFSQGISHGHQQLLEAESPGHTLTQSPFHSSSYGICSSPRRMSPRC 189
+ + +Q I+TQ Q + Q + +SPGH+ QS S SY + S R MS
Sbjct: 5 SHLQNQKQLSISTQLL-QATTQMQQAATDPQSPGHSFLQSSVLSPSYSLASLGR-MSSFS 62
Query: 190 VDVERLXXXXXXXXXXXXXXXXXXXXXTVIQREKRSLSSREVGAHVPPTMSDWGSPTGK 366
D + +++RS SSR++GAHV PT SDWGSPTGK
Sbjct: 63 GDFQ-CHKSNESLLSPVMSPTLNSRVSAFSHQDRRSYSSRDLGAHVLPTSSDWGSPTGK 120