BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020163
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citr...    62   1e-07
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    61   1e-07
ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...    57   3e-06
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]        57   3e-06
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei...    55   7e-06
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citrus clementina]
           gi|557532932|gb|ESR44115.1| hypothetical protein
           CICLE_v10011236mg [Citrus clementina]
          Length = 671

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 8   VVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAK 187
           V E  ++P H TY EL K L+     K+   +  LMK++       +P  +   I +++K
Sbjct: 541 VCEYDLKPWHTTYKELIKNLLVQRGFKDALSLLCLMKDHG------FPPFVDPFIKYVSK 594

Query: 188 RGTLEDASSFLSKL-KKDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMK 364
            GT +DA +FL  +  K   S    + +  AF    RH EAQ+L+SK P  + N+  ++ 
Sbjct: 595 SGTSDDAIAFLKGMTSKRFPSMSVVLCLFEAFFQARRHSEAQDLLSKCPRYIRNHADVLN 654

Query: 365 LL 370
           LL
Sbjct: 655 LL 656


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
 Frame = +2

Query: 8   VVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAK 187
           V + ++ P   TY  L ++L+    ++E   +  LMK++NH P   +P      + ++++
Sbjct: 502 VDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPP---FP---EPFVQYISR 555

Query: 188 RGTLEDASSFLSKLK-KDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMK 364
            GT++DA+ FL  L  K+  S    +++  +F    RH EA++L+ K P  +  +P+I +
Sbjct: 556 FGTVDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISE 615

Query: 365 LLKECPNESTS 397
           L      E  +
Sbjct: 616 LFGSAKTEDAT 626


>ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Citrus sinensis]
          Length = 671

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 8   VVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAK 187
           V E  ++P H TY EL K L+     K+   +  LMK++       +P  +   I +++K
Sbjct: 541 VREYDLKPWHTTYEELIKNLLVQRGFKDALSLLCLMKDHG------FPPFVDPFIKYVSK 594

Query: 188 RGTLEDASSFLSKL-KKDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMK 364
            GT +DA +FL  +  K   S    + +  AF    RH EAQ+L+SK P  V N+  ++ 
Sbjct: 595 SGTSDDAIAFLKGMTSKRFPSMSVVLCLFAAFFQARRHSEAQDLLSKCPRYVRNHADVLN 654

Query: 365 LL 370
           LL
Sbjct: 655 LL 656


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   VVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAK 187
           + ++++ P   T+  L ++L+ +  ++E   +  LMK+ N      YP      + +++K
Sbjct: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN------YPPFPEPFVQYISK 558

Query: 188 RGTLEDASSFLSKLK-KDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMK 364
            GT+EDAS FL  L  K+  S    + +  +F N  RH EA++L+ K P  +  + +I  
Sbjct: 559 FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISL 618

Query: 365 L 367
           L
Sbjct: 619 L 619


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = +2

Query: 23  IEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAKRGTLE 202
           + P   TY +L K L+    ++E   +  LMK+ N      YP      + +++K GT++
Sbjct: 502 VRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQN------YPPFPEPFVQYISKFGTVQ 555

Query: 203 DASSFLSKL-KKDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMKLLKEC 379
           DA  FL  L  K+  S    + + ++F N  R+ EA++L+ K P  +  +  + KL    
Sbjct: 556 DADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 615

Query: 380 PNESTS 397
            + +T+
Sbjct: 616 ESNTTA 621


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   VVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAK 187
           + ++ + P   T+  L ++L+ +  ++E   +  LMK+ N      YP      + +++K
Sbjct: 505 IEKVHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN------YPPFPEPFVQYISK 558

Query: 188 RGTLEDASSFLSKLK-KDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMK 364
            GT EDAS FL  L  K+  S    + +  +F N  RH EA++L+ K P  +  + +I  
Sbjct: 559 FGTAEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISL 618

Query: 365 L 367
           L
Sbjct: 619 L 619


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +2

Query: 14  ELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAKRG 193
           +LK+ P   T+  L ++L+     +E   +  +MK  N      YP      + +++K G
Sbjct: 510 KLKLRPWQSTFKNLIQQLLDGRRFEEAVRLLAMMKRQN------YPPHCEPFVDYVSKFG 563

Query: 194 TLEDASSFLSKLK-KDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMKL 367
           +++DA  FLS L  K+  S      +  AF N NRH EA++L+ + P  V  +P +  L
Sbjct: 564 SVDDALEFLSSLTVKEYPSISSYRHVFGAFLNENRHSEAKDLLFRCPHHVRKHPAVCSL 622


>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 660

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   KAVVELKIEPSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFL 181
           K V E ++ P H TY EL ++L+     ++   +  LMK++       +P  +   I ++
Sbjct: 527 KYVSENQLRPWHTTYKELIRKLLAQGGFRDGLSLLGLMKDHG------FPPFVDPFIDYV 580

Query: 182 AKRGTLEDASSFL-SKLKKDGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRI 358
           +K G+ EDA +FL S   K   S    + +  AF    R  EAQ+L+SK P  V N+  +
Sbjct: 581 SKSGSSEDAIAFLKSMTSKRFPSLSVVLRVFEAFFKAARQNEAQDLLSKCPGYVRNHADV 640

Query: 359 MKL 367
           + L
Sbjct: 641 LNL 643


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 635

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +2

Query: 29  PSHPTYVELFKELIRSSMVKEVCEIFDLMKEYNHAPDGYYPIIMRQIIHFLAKRGTLEDA 208
           P  PTY ++ + L+    ++E   +  LM ++ + P        + I+ F++K GT+EDA
Sbjct: 513 PRQPTYEKVIENLLGIGKLEEALVLLCLMWKHKYTP------FTKPIVQFISKSGTVEDA 566

Query: 209 SSFLSKLKK-DGISGKGCMSMVHAFCNNNRHKEAQELVSKLPVKVANNPRIMKLLKECPN 385
             FL   +K + +S    + +  +F    +  EA++L+SK P ++    ++++      N
Sbjct: 567 EKFLKAWRKGNPVSHSAYLHVFESFIREGKLSEAKDLLSKCPSRIRRRRQVVEFFDSVEN 626

Query: 386 ESTS 397
            + +
Sbjct: 627 RNAA 630