BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020123
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003975713.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    57   3e-06
ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu...    56   4e-06
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...    56   4e-06
ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brac...    56   4e-06
ref|XP_005996798.1| PREDICTED: U1 small nuclear ribonucleoprotei...    56   6e-06
emb|CAG07709.1| unnamed protein product [Tetraodon nigroviridis]       55   7e-06
ref|XP_772976.1| hypothetical protein CNBJ2520 [Cryptococcus neo...    55   1e-05

>ref|XP_003975713.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Takifugu rubripes]
          Length = 461

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = +3

Query: 60  RRGRSRETDSADDNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIRD 239
           R GR R+ D  D       +SR  A R+++ +E R+SRS+ +D K+   + +    + R+
Sbjct: 287 REGRDRDRDRGDRGDRDRRRSR-SADRNQERRERRKSRSSSRDRKSERRDKERDGGDDRN 345

Query: 240 REKSRENHKPNGDEKSREKNHRS---SDQFHIRENEKRYSRR 356
           + K RE+HK  G E+ R ++ +S   SD    +E+  R  R+
Sbjct: 346 KRKEREHHKDRGTERERSRDKKSRGESDDRKHKEDRHRDERK 387


>ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = +3

Query: 60  RRGRSRETDSADDNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIRD 239
           RR R  ETD   +      ++R R S  EKE+E  R R  ++D   + E+ +  D + +D
Sbjct: 82  RRDREEETDGGKERDKERNRTRERGS-SEKERERDRDRE-ERDRDRHKEKERERDKDRKD 139

Query: 240 REKSRENHKPNGDEKSREKNHRSSDQFHIRENEKRYSRRD 359
           +E+ RE HK    ++ R+K+ R  ++   +E EK   RRD
Sbjct: 140 KERDRERHKEK--DRERDKDRRDKEREREKEKEKERERRD 177


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = +3

Query: 60  RRGRSRETDSADDNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIRD 239
           RR R  ETD   +      ++R R S  EKE+E  R R  ++D   + E+ +  D + +D
Sbjct: 82  RRDREEETDGGKERDKERNRTRERGS-SEKERERDRDRE-ERDRDRHKEKERERDKDRKD 139

Query: 240 REKSRENHKPNGDEKSREKNHRSSDQFHIRENEKRYSRRD 359
           +E+ RE HK    ++ R+K+ R  ++   +E EK   RRD
Sbjct: 140 KERDRERHKEK--DRERDKDRRDKEREREKEKEKERERRD 177


>ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
          Length = 551

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
 Frame = +3

Query: 51  AEGRRGRSRETDSADDNPHTEGQSRVRASRDE-------KEKENRRSRSTDQDNKTNIEE 209
           +EG+   SR   SA D    +G+ R + SR E       +E+E  R  S  + ++   + 
Sbjct: 28  SEGKERSSRRRSSAGDEDRDDGERRSKRSRSENRDRDRDRERERDRESSRHRSSRERRDR 87

Query: 210 GQITDDEIRDREKSRENHKPNGDEKSREKNHRSSDQFHIRENEKRYSRR 356
            +  D++ ++RE+ RE  K    E+ +EK  RS D+   RE EK   RR
Sbjct: 88  DRDRDEKEKEREREREKEKER--ERDKEKERRSRDRDREREKEKERERR 134


>ref|XP_005996798.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
           [Latimeria chalumnae]
          Length = 444

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/96 (36%), Positives = 51/96 (53%)
 Frame = +3

Query: 57  GRRGRSRETDSADDNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIR 236
           GR   SR  D  D +   +   R R+   EKE+E RRSRS ++  +T  +E    ++  R
Sbjct: 199 GRDDTSRY-DERDRDRERDRDRRERSREREKERERRRSRSRERRRRTRSQE---KEERKR 254

Query: 237 DREKSRENHKPNGDEKSREKNHRSSDQFHIRENEKR 344
            RE+SRE  K    E+ R++  RS D+   R+ EKR
Sbjct: 255 SRERSREKDKEKEKERDRKRRSRSRDRKRDRDREKR 290


>emb|CAG07709.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 464

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
 Frame = +3

Query: 60  RRGRSRETDSAD-DNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIR 236
           R GR R+ D  D D      +S   A R ++ +E RRSRS+ +D K+   + +    + R
Sbjct: 287 REGRDRDRDRGDRDRDRRRSRS---ADRTQERRERRRSRSSSRDRKSERRDKERDGGDDR 343

Query: 237 DREKSRENHKPNG--DEKSREKNHR--SSDQFHIRENEKRYSRR 356
           +R K RE HK  G   EKSR+K  R  S D+ H  + E+    R
Sbjct: 344 NRRKERELHKDRGTEKEKSRDKKSRGESDDRRHKEDRERHRDER 387


>ref|XP_772976.1| hypothetical protein CNBJ2520 [Cryptococcus neoformans var.
           neoformans B-3501A] gi|50255596|gb|EAL18329.1|
           hypothetical protein CNBJ2520 [Cryptococcus neoformans
           var. neoformans B-3501A]
          Length = 772

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/97 (29%), Positives = 52/97 (53%)
 Frame = +3

Query: 72  SRETDSADDNPHTEGQSRVRASRDEKEKENRRSRSTDQDNKTNIEEGQITDDEIRDREKS 251
           S + +   +N  TEG+   R +R EK+KENR+  S D+  +   EEG+  +D   D+   
Sbjct: 601 SSKKNKEKNNNRTEGEVPKRTNRKEKKKENRKQLSGDETEEKEEEEGEEEEDGENDKNGK 660

Query: 252 RENHKPNGDEKSREKNHRSSDQFHIRENEKRYSRRDD 362
           ++N K    +K++++N R++++       KR   R D
Sbjct: 661 KQNKKLVKKKKTKKENKRAAEEEAKNRERKRSMERGD 697