BLASTX nr result

ID: Ephedra27_contig00020108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020108
         (947 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera]    58   5e-06
ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255...    57   8e-06

>emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera]
          Length = 532

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 59/201 (29%), Positives = 77/201 (38%), Gaps = 12/201 (5%)
 Frame = -3

Query: 660 AVPLSNYQFDFGLDLNLSGKNQGPKSLKDQKXXXXXXXXXXXXXXXXXXXXNKGSSWTHK 481
           +VPL+NYQFDFGL  + S      + L DQK                        SWTH+
Sbjct: 17  SVPLNNYQFDFGLGSSRS------RPLNDQKQQSSHSSSFSAPQSHPWQPNKP--SWTHQ 68

Query: 480 PVSSNSPAYGXXXXXXXXXXXXXXSGDIFGKSWVQNSSSLKKXXXXXXXXXXXXXXAPHL 301
           P  + +   G               GDIFGKSW  +                     P+L
Sbjct: 69  PAPTQTTRSGSSNGPGSMV------GDIFGKSWAPSPGPSS--------GIGIVDKNPNL 114

Query: 300 FGDLFGEALAK------QKNNTPVTSQLRK------NSGSSVPRSTGVALKDQKPIPSKG 157
           FGDL G AL K       KN+TPV++Q  K      N   S+P+ TG + K         
Sbjct: 115 FGDLVGSALGKVNSNVPLKNSTPVSAQSTKSPYSMGNLADSLPK-TGNSAKSGGNW-GNS 172

Query: 156 QDPFDVFTSFGNSGGVNSQKN 94
           +D     + + NS  VN   N
Sbjct: 173 EDFGGYSSGYNNSSNVNKSTN 193


>ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255130 [Vitis vinifera]
          Length = 496

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 57/201 (28%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
 Frame = -3

Query: 660 AVPLSNYQFDFGLDLNLSGKNQGPKSLKDQKXXXXXXXXXXXXXXXXXXXXNKGSSWTHK 481
           +VPL+NYQFDFGL  + S      + L DQK                        SWTH+
Sbjct: 17  SVPLNNYQFDFGLGSSRS------RPLNDQKQQSSHSSSFSAPQSHPWQPNKP--SWTHQ 68

Query: 480 PVSSNSPAYGXXXXXXXXXXXXXXSGDIFGKSWVQNSSSLKKXXXXXXXXXXXXXXAPHL 301
           P  + +   G               GDIFGKSW  +                     P+L
Sbjct: 69  PAPTQTTRSGPSNGPASMV------GDIFGKSWAPSPGPSS--------GIGIVDKNPNL 114

Query: 300 FGDLFGEALAK------QKNNTPVTSQLRK------NSGSSVPRSTGVALKDQKPIPSKG 157
           FGDL G AL K       KN+TPV++Q  K      N   S+P++   A        S+ 
Sbjct: 115 FGDLVGSALGKVNSNVPLKNSTPVSAQSTKSPYSMGNLADSLPKTGNSAKSGGNWGNSEN 174

Query: 156 QDPFDVFTSFGNSGGVNSQKN 94
              +   + + NS  VN   N
Sbjct: 175 FGGYS--SGYNNSSNVNKSTN 193


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