BLASTX nr result
ID: Ephedra27_contig00020027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00020027
(1126 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 327 4e-87
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 315 2e-83
gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus pe... 315 3e-83
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 312 2e-82
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 311 4e-82
gb|ABR18148.1| unknown [Picea sitchensis] 311 4e-82
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 307 4e-81
ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Sela... 307 4e-81
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 307 6e-81
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|5... 306 1e-80
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 305 2e-80
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 305 2e-80
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 304 5e-80
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 303 1e-79
gb|AFK38034.1| unknown [Lotus japonicus] 302 1e-79
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 302 2e-79
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 302 2e-79
gb|AFK41303.1| unknown [Medicago truncatula] 301 3e-79
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 300 9e-79
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 299 1e-78
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 327 bits (839), Expect = 4e-87
Identities = 159/203 (78%), Positives = 182/203 (89%)
Frame = +3
Query: 219 MGDNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDK 398
M D +K++RIRRT+MQML+DRGYLV DFEINM+K FI KFG++ +KDDL +NKT R+
Sbjct: 4 MDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63
Query: 399 PSEQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHL 578
PSEQIYVFFPEE KVGVKT+KTY ERMK+E+VFRA+LV+QQNLTPFAR + E KFHL
Sbjct: 64 PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123
Query: 579 EVFQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKR 758
E+FQE+ELLVNIKEHVLVPEH VLT+EEKKTLLERYTLKETQLPR+Q +DPI+RYYGLKR
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 759 GQVVKIIRPSETAGRYVTYRYVV 827
GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 315 bits (808), Expect = 2e-83
Identities = 153/201 (76%), Positives = 179/201 (89%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ ++++RIR+TVMQMLKDRGY V DFEINM+K F+SKFGE+ +++DL +NK KR S
Sbjct: 6 EEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY RMK+E+VFRA+LVVQQNLTPFAR ++E KFHLEV
Sbjct: 66 DQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH VLT+EEKKTLLERYT+KETQLPR+Q SDPI+RY+GLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRY+TYRYVV
Sbjct: 186 VVKIIRPSETAGRYITYRYVV 206
>gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 315 bits (806), Expect = 3e-83
Identities = 149/201 (74%), Positives = 179/201 (89%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++R+R+TVMQMLKDR YLV DFEINM+++ F SK+GE+ +++DLT+NKTKR S
Sbjct: 6 EEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEEPKVGVKT+KTY RMK+E+V RA+LV QQNLTPFA+ +SE KFHLEV
Sbjct: 66 DQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH+VLT EEKKTLLERYT+KETQLPR+Q +DPI++YYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRY+TYRYV+
Sbjct: 186 VVKIIRPSETAGRYITYRYVI 206
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 312 bits (799), Expect = 2e-82
Identities = 152/201 (75%), Positives = 177/201 (88%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIRRTVMQML+DRGY V DFEINMSK+ FI+KFGE+ +++DL +NK R+ S
Sbjct: 6 EEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFP+E KVGVKT+KTY RMK+E+VFRA+LVVQQNLTPFAR + E KFHLEV
Sbjct: 66 DQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH VLT EEKKTLL+RYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYRYVV
Sbjct: 186 VVKIIRPSETAGRYVTYRYVV 206
>gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 311 bits (796), Expect = 4e-82
Identities = 151/201 (75%), Positives = 177/201 (88%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
D +++RIR+TVMQMLKDRGY V DFEI M+K FISK+GE+ +++DL +NKTKR+ S
Sbjct: 6 DEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDNS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFP+E KVGVKT+KTY RMK+E+VFRA+LVVQQNLTPFAR ++E KFHLEV
Sbjct: 66 DQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQE+ELLVN+KEH LVPEH VLT EEKKTLL+RYT+KETQLPR+Q SDPI+RYYGLKRGQ
Sbjct: 126 FQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYRYVV
Sbjct: 186 VVKIIRPSETAGRYVTYRYVV 206
>gb|ABR18148.1| unknown [Picea sitchensis]
Length = 194
Score = 311 bits (796), Expect = 4e-82
Identities = 155/203 (76%), Positives = 174/203 (85%)
Frame = +3
Query: 219 MGDNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDK 398
+ + NK++RIRRTV+QML DR YLV DFEIN +K+ F+ KFGEDP+K+DL +NK KR+
Sbjct: 3 LDEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNS 62
Query: 399 PSEQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHL 578
PSEQI+VFFPEE KVGVK+IKTYVERMK+E VFRA+LVVQQ EF GKFHL
Sbjct: 63 PSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQ-----------EFSGKFHL 111
Query: 579 EVFQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKR 758
EVFQEAELLVNIKEHVLVPE +LT EEKKTLLERYTLKETQLPRMQESDP++RYYGLKR
Sbjct: 112 EVFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTLKETQLPRMQESDPVARYYGLKR 171
Query: 759 GQVVKIIRPSETAGRYVTYRYVV 827
GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 172 GQVVKIIRPSETAGRYVTYRYVV 194
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 307 bits (787), Expect = 4e-81
Identities = 145/201 (72%), Positives = 176/201 (87%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +K++R+R+T+M+ML DRGYLV DFEINMSK F+ K+GE+ +++DL + K KR+ S
Sbjct: 6 EELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEEPKVGVKT+KTY ERMK E VF+A+L+VQQNLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAE+LVNIK HVL+PEH +L+ EEKKTLLERYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRY+TYRYVV
Sbjct: 186 VVKIIRPSETAGRYITYRYVV 206
>ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Selaginella moellendorffii]
gi|302807361|ref|XP_002985375.1| hypothetical protein
SELMODRAFT_181697 [Selaginella moellendorffii]
gi|300146838|gb|EFJ13505.1| hypothetical protein
SELMODRAFT_181697 [Selaginella moellendorffii]
gi|300152427|gb|EFJ19069.1| hypothetical protein
SELMODRAFT_228648 [Selaginella moellendorffii]
Length = 206
Score = 307 bits (787), Expect = 4e-81
Identities = 145/204 (71%), Positives = 180/204 (88%)
Frame = +3
Query: 216 RMGDNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRD 395
++ D+ N+++RIRRT+MQML+DR YLVAD+E++++K+ F KFG++P++DDL ++K KR
Sbjct: 3 QLDDSTNRLYRIRRTIMQMLRDRDYLVADYEVSLTKEQFRDKFGDEPKRDDLVISKAKRS 62
Query: 396 KPSEQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFH 575
S+QI+VFFPEEPKVGVKTIKTY ERMK+E VFRA++VVQ +LTPFA+ LSE K+
Sbjct: 63 DQSDQIFVFFPEEPKVGVKTIKTYAERMKSELVFRAIMVVQTSLTPFAKQCLSEMAPKYQ 122
Query: 576 LEVFQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLK 755
+EVFQEAELLVNIKEH LVPEH VL+AEEKKTLLERYT+KE+QLPRMQ+ DP++RYYGLK
Sbjct: 123 IEVFQEAELLVNIKEHTLVPEHQVLSAEEKKTLLERYTVKESQLPRMQDRDPVARYYGLK 182
Query: 756 RGQVVKIIRPSETAGRYVTYRYVV 827
GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 183 HGQVVKIIRPSETAGRYVTYRYVV 206
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 307 bits (786), Expect = 6e-81
Identities = 148/200 (74%), Positives = 177/200 (88%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
D +++RIRRTVMQML+DR YLV DFE+NM+K+ F +K+GE+ +++DL +NK++R+
Sbjct: 6 DEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDSP 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY+ RMK+E+V RA+LVVQQNLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH VLT EEKKTLLERYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYV 824
VVKIIRPSETAGRY+TYRYV
Sbjct: 186 VVKIIRPSETAGRYITYRYV 205
>ref|XP_002331171.1| predicted protein [Populus trichocarpa]
gi|566176743|ref|XP_006381734.1| DNA-directed RNA
polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 306 bits (784), Expect = 1e-80
Identities = 149/201 (74%), Positives = 176/201 (87%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ ++ RIR+TVMQMLKDRGY V DFEI M+++ F SK+G + +++DL +NKTKR+ S
Sbjct: 6 EEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY RMK+E+VFRA+LVVQQNLTPFAR ++E KFHLEV
Sbjct: 66 DQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH VL+ EEKKTLLERYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYRYV+
Sbjct: 186 VVKIIRPSETAGRYVTYRYVI 206
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 305 bits (782), Expect = 2e-80
Identities = 146/201 (72%), Positives = 177/201 (88%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVM+ML+DR YLV DFEINMSK F K+GE+ +++DL +NKTK+DKPS
Sbjct: 6 EEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY+ RM +E+V+RA+LV Q +LTPFAR S++E KFHLEV
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIK+HVLVPEH VLT EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR+VV
Sbjct: 186 VVKIIRPSETAGRYVTYRFVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 305 bits (781), Expect = 2e-80
Identities = 143/201 (71%), Positives = 177/201 (88%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ ++++R+R+T+M+ML DRGYLV DFEINMSK F+ K+GE+ +++DL + K KR+ S
Sbjct: 6 EELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNNSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEEPKVGVKT+KTY ERMK E VF+A+L+VQQNLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAE+LVNIK HVL+PEH++L+ EEKK+LLERYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRY+TYRYVV
Sbjct: 186 VVKIIRPSETAGRYITYRYVV 206
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 304 bits (778), Expect = 5e-80
Identities = 145/201 (72%), Positives = 175/201 (87%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ ++++R+R+T+M+ML DRGYLV DFEINMSK F+ K+GE+ +++DL + K KR+ S
Sbjct: 6 EELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNSS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEEPKVGVKT+KTY ERMK E VF+A+L+VQQNLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAE+LVNIK HVL+P+H LT EEKKTLLERYT+KETQLPR+Q +DPI+RYYGLKRGQ
Sbjct: 126 FQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYRYVV
Sbjct: 186 VVKIIRPSETAGRYVTYRYVV 206
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|355511987|gb|AES93610.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC1 [Medicago truncatula]
Length = 410
Score = 303 bits (775), Expect = 1e-79
Identities = 145/201 (72%), Positives = 174/201 (86%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVMQMLKDR YLV DFE+NMSK F K+GE+ +++DL +NKTK+DKPS
Sbjct: 210 EEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKPS 269
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY RM +E+V+RA+LV Q +LTPFA+ +SE KFHLEV
Sbjct: 270 DQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLEV 329
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH +L EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 330 FQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 389
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR+VV
Sbjct: 390 VVKIIRPSETAGRYVTYRFVV 410
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 302 bits (774), Expect = 1e-79
Identities = 144/201 (71%), Positives = 175/201 (87%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
++ K+ RIR+TVMQML+DR YLV DFEINMS+ F +K+G++ +++DLT+NKTK+D PS
Sbjct: 6 EDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTKKDGPS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFP+EPKVGVKT+KTY RM +E+VFRA+LV Q NLTPFA+ +SE KF LEV
Sbjct: 66 DQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSKFQLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH +L EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRY+TYR+VV
Sbjct: 186 VVKIIRPSETAGRYITYRFVV 206
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 302 bits (773), Expect = 2e-79
Identities = 145/201 (72%), Positives = 174/201 (86%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVM ML+DR YLV DFE+NMSK F K+GE+ +++DL +NKTK+DKPS
Sbjct: 6 EEITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKPS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY RM +E+V+RA+LV Q +LTPFAR ++E KFHLEV
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH VLT EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR+VV
Sbjct: 186 VVKIIRPSETAGRYVTYRFVV 206
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 302 bits (773), Expect = 2e-79
Identities = 145/201 (72%), Positives = 173/201 (86%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVMQML+DRG+LV DFEINMSK F SK+GE +++DL +NK+K+D
Sbjct: 6 EEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSG 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFP+EPKVGVKT+KTY RM +E+V+RA+LV Q NLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEH LVPEH VLT EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR+VV
Sbjct: 186 VVKIIRPSETAGRYVTYRFVV 206
>gb|AFK41303.1| unknown [Medicago truncatula]
Length = 206
Score = 301 bits (771), Expect = 3e-79
Identities = 145/201 (72%), Positives = 173/201 (86%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVMQMLKDR YLV DFE+NMSK F K+GE+ +++DL +NKTK+DKPS
Sbjct: 6 EEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKPS 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFPEE KVGVKT+KTY RM +E+V+RA+LV Q +LTPFA+ +SE KFHLEV
Sbjct: 66 DQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEHVLVPEH +L EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR VV
Sbjct: 186 VVKIIRPSETAGRYVTYRLVV 206
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 300 bits (767), Expect = 9e-79
Identities = 144/201 (71%), Positives = 172/201 (85%)
Frame = +3
Query: 225 DNANKMWRIRRTVMQMLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPS 404
+ +++RIR+TVMQML+DR +LV DFEINMSK F SK+GE +++DL +NK+K+D
Sbjct: 6 EEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSG 65
Query: 405 EQIYVFFPEEPKVGVKTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEV 584
+QIYVFFP+EPKVGVKT+KTY RM +E+V+RA+LV Q NLTPFAR +SE KFHLEV
Sbjct: 66 DQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEV 125
Query: 585 FQEAELLVNIKEHVLVPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQ 764
FQEAELLVNIKEH LVPEH VLT EKKTLLERYT+KETQLPR+Q +DP++RYYGLKRGQ
Sbjct: 126 FQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
Query: 765 VVKIIRPSETAGRYVTYRYVV 827
VVKIIRPSETAGRYVTYR+VV
Sbjct: 186 VVKIIRPSETAGRYVTYRFVV 206
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 299 bits (766), Expect = 1e-78
Identities = 146/186 (78%), Positives = 166/186 (89%)
Frame = +3
Query: 270 MLKDRGYLVADFEINMSKDSFISKFGEDPRKDDLTVNKTKRDKPSEQIYVFFPEEPKVGV 449
MLKDRGY V DFEINM+K F+SKFGE+ +++DL +NK KR S+QIYVFFPEE KVGV
Sbjct: 1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60
Query: 450 KTIKTYVERMKNESVFRAMLVVQQNLTPFARNSLSEFQGKFHLEVFQEAELLVNIKEHVL 629
KT+KTY RMK+E+VFRA+LVVQQNLTPFAR ++E KFHLEVFQEAELLVNIKEHVL
Sbjct: 61 KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVL 120
Query: 630 VPEHVVLTAEEKKTLLERYTLKETQLPRMQESDPISRYYGLKRGQVVKIIRPSETAGRYV 809
VPEH VLT+EEKKTLLERYT+KETQLPR+Q SDPI+RY+GLKRGQVVKIIRPSETAGRY+
Sbjct: 121 VPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYI 180
Query: 810 TYRYVV 827
TYRYVV
Sbjct: 181 TYRYVV 186