BLASTX nr result

ID: Ephedra27_contig00020006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00020006
         (375 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006851559.1| hypothetical protein AMTR_s00040p00188020 [A...    57   3e-06

>ref|XP_006851559.1| hypothetical protein AMTR_s00040p00188020 [Amborella trichopoda]
           gi|548855253|gb|ERN13140.1| hypothetical protein
           AMTR_s00040p00188020 [Amborella trichopoda]
          Length = 586

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
 Frame = -3

Query: 367 LMDITKDHLQKSFSLVN-NDVS--PSESHTVRTLLSAVITNYDTCIDSIDQKRSQEHLLS 197
           L+    D LQ SFS ++ ND+   P  ++ +R  LSAV+T ++TC+D +D          
Sbjct: 154 LLSFAIDELQDSFSDISGNDMKSLPDRAYQLRVWLSAVLTYHETCVDGLDHPE------- 206

Query: 196 IVALRATLTQGMQ----ISSNALAIFAHFHPDEFAADDESLPFSIINAEGEE--FPSWLS 35
              L+AT+  G+     ++SNALAI               +PFSI +    E  FP WL+
Sbjct: 207 ---LKATMRDGLANATVMTSNALAIITEISK---ILSSFQIPFSIPSRRLLETGFPEWLN 260

Query: 34  SEDRRTLLEG 5
             DRR L  G
Sbjct: 261 EGDRRLLAGG 270


Top